RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 GOT1L1Q8NHS2 421 aaPredicted RBP6.33□□□□□ -1.4
TRIM53CP-201ENST00000531490 SPATA3Q8NHX4 192 aa6.33□□□□□ -1.4
TRIM53CP-201ENST00000531490 FBXO30Q8TB52 745 aa6.33□□□□□ -1.4
TRIM53CP-201ENST00000531490 MTERF3Q96E29 417 aa6.33□□□□□ -1.4
TRIM53CP-201ENST00000531490 FAM120BQ96EK7 910 aaKnown RBP6.33□□□□□ -1.4
TRIM53CP-201ENST00000531490 ZBED6CLQ96FA7 236 aaPredicted RBP6.33□□□□□ -1.4
TRIM53CP-201ENST00000531490 ZNF764Q96H86 408 aaPredicted RBP6.33□□□□□ -1.4
TRIM53CP-201ENST00000531490 COL21A1Q96P44 957 aa6.33□□□□□ -1.4
TRIM53CP-201ENST00000531490 FAM107BQ9H098 131 aa6.33□□□□□ -1.4
TRIM53CP-201ENST00000531490 SLC6A15Q9H2J7 730 aa6.33□□□□□ -1.4
TRIM53CP-201ENST00000531490 UBQLN3Q9H347 655 aa6.33□□□□□ -1.4
TRIM53CP-201ENST00000531490 CCDC134Q9H6E4 229 aa6.33□□□□□ -1.4
TRIM53CP-201ENST00000531490 ZNF703Q9H7S9 590 aaPredicted RBP6.33□□□□□ -1.4
TRIM53CP-201ENST00000531490 CXorf36Q9H7Y0 433 aa6.33□□□□□ -1.4
TRIM53CP-201ENST00000531490 METTL7AQ9H8H3 244 aa6.33□□□□□ -1.4
TRIM53CP-201ENST00000531490 MEAF6Q9HAF1 191 aa6.33□□□□□ -1.4
TRIM53CP-201ENST00000531490 SLCO1B3Q9NPD5 702 aa6.33□□□□□ -1.4
TRIM53CP-201ENST00000531490 ACSS1Q9NUB1 689 aaPredicted RBP6.33□□□□□ -1.4
TRIM53CP-201ENST00000531490 DDX18Q9NVP1 670 aaKnown RBP6.33□□□□□ -1.4
TRIM53CP-201ENST00000531490 ALKBH4Q9NXW9 302 aa6.33□□□□□ -1.4
TRIM53CP-201ENST00000531490 CBLCQ9ULV8 474 aa6.33□□□□□ -1.4
TRIM53CP-201ENST00000531490 EIF3LQ9Y262 564 aaKnown RBP6.33□□□□□ -1.4
TRIM53CP-201ENST00000531490 KCNE3Q9Y6H6 103 aa6.33□□□□□ -1.4
TRIM53CP-201ENST00000531490 HCFC1P51610 2035 aa6.33□□□□□ -1.4
TRIM53CP-201ENST00000531490 OR6C70A6NIJ9 312 aa6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 KDM4EB2RXH2 506 aaPredicted RBP6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 INAFM1C9JVW0 142 aa6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 FAM47E-STBD1D6RA91 191 aa6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 H7C1Q1 480 aa6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 EBAG9O00559 213 aa6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 NDUFAB1O14561 156 aa6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 HDAC3O15379 428 aa6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 FADS1O60427 444 aa6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 TRAPPC6AO75865 159 aa6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 SNX4O95219 450 aa6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 C6orf47O95873 294 aa6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 FAM107AO95990 144 aa6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 RAF1P04049 648 aa6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 HMGN2P05204 90 aaKnown RBP6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 LBPP18428 481 aa6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 PRPS1L1P21108 318 aa6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 GDF1P27539 372 aa6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 PTPN6P29350 595 aa6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 RFX3P48380 749 aa6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 TMED10P49755 219 aaKnown RBP6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 CASP9P55211 416 aa6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 HBA1P69905 142 aa6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 GUCY1A3Q02108 690 aa6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 ZNF155Q12901 538 aaPredicted RBP6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 ZSCAN26Q16670 478 aa6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 DUSP5Q16690 384 aa6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 SMU1Q2TAY7 513 aa6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 EIPR1Q53HC9 387 aa6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 ANGPTL8Q6UXH0 198 aa6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 B3GNT6Q6ZMB0 384 aa6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 RGS9BPQ6ZS82 235 aa6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 R3HCC1LQ7Z5L2 792 aaKnown RBP6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 CPLX4Q7Z7G2 160 aa6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 YRDCQ86U90 279 aaKnown RBP6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 ANKRD46Q86W74 232 aa6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 CLECL1Q8IZS7 167 aa6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 OR4C3Q8NH37 302 aa6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 RNF138Q8WVD3 245 aa6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 SLC9A6Q92581 669 aa6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 HOXB13Q92826 284 aaPredicted RBP6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 CHMP6Q96FZ7 201 aa6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 SLC35A4Q96G79 324 aa6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 TMEM41AQ96HV5 264 aa6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 OR52B2Q96RD2 323 aa6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 SECISBP2Q96T21 854 aaKnown RBP6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 LMF2Q9BU23 707 aaKnown RBP6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 DUSP26Q9BV47 211 aa6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 LDAHQ9H6V9 325 aa6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 SERHLQ9NQF3 203 aa6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 ASIC5Q9NY37 505 aa6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 SPRR3Q9UBC9 169 aa6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 FBXL2Q9UKC9 423 aa6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 BOKQ9UMX3 212 aaPredicted RBP6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 MAPRE3Q9UPY8 281 aa6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 SLC6A5Q9Y345 797 aa6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 OR10H1Q9Y4A9 318 aa6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 SNX8Q9Y5X2 465 aa6.32□□□□□ -1.4
TRIM53CP-201ENST00000531490 TRGV5A0A0B4J1U4 118 aa6.31□□□□□ -1.4
TRIM53CP-201ENST00000531490 A0A1W2PPR1 153 aa6.31□□□□□ -1.4
TRIM53CP-201ENST00000531490 PRAMEF25A6NGN4 478 aa6.31□□□□□ -1.4
TRIM53CP-201ENST00000531490 ACOT7O00154 380 aa6.31□□□□□ -1.4
TRIM53CP-201ENST00000531490 AQP7O14520 342 aa6.31□□□□□ -1.4
TRIM53CP-201ENST00000531490 KLF11O14901 512 aa6.31□□□□□ -1.4
TRIM53CP-201ENST00000531490 EMC8O43402 210 aa6.31□□□□□ -1.4
TRIM53CP-201ENST00000531490 ZIC3O60481 467 aa6.31□□□□□ -1.4
TRIM53CP-201ENST00000531490 COQ9O75208 318 aa6.31□□□□□ -1.4
TRIM53CP-201ENST00000531490 NKX2-2O95096 273 aa6.31□□□□□ -1.4
TRIM53CP-201ENST00000531490 SNUPNO95149 360 aaKnown RBP6.31□□□□□ -1.4
TRIM53CP-201ENST00000531490 IL33O95760 270 aa6.31□□□□□ -1.4
TRIM53CP-201ENST00000531490 TCEA1P23193 301 aaKnown RBP6.31□□□□□ -1.4
TRIM53CP-201ENST00000531490 HPCAL1P37235 193 aa6.31□□□□□ -1.4
TRIM53CP-201ENST00000531490 MASP1P48740 699 aa6.31□□□□□ -1.4
TRIM53CP-201ENST00000531490 CCT3P49368 545 aaKnown RBP6.31□□□□□ -1.4
TRIM53CP-201ENST00000531490 MAN2A2P49641 1150 aa6.31□□□□□ -1.4
TRIM53CP-201ENST00000531490 NKX6-1P78426 367 aaPredicted RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms