RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 LOC100509620A0A075B734 347 aa6.05□□□□□ -1.44
CSDE1-213ENST00000530784 CCDC162PA2VCL2 907 aa6.05□□□□□ -1.44
CSDE1-213ENST00000530784 E2F3O00716 465 aa6.05□□□□□ -1.44
CSDE1-213ENST00000530784 PSMD3O43242 534 aa6.05□□□□□ -1.44
CSDE1-213ENST00000530784 LRRTM2O43300 516 aa6.05□□□□□ -1.44
CSDE1-213ENST00000530784 ALOX12BO75342 701 aa6.05□□□□□ -1.44
CSDE1-213ENST00000530784 GAS8O95995 478 aa6.05□□□□□ -1.44
CSDE1-213ENST00000530784 IGLV1-44P01699 117 aa6.05□□□□□ -1.44
CSDE1-213ENST00000530784 CD9P21926 228 aa6.05□□□□□ -1.44
CSDE1-213ENST00000530784 TSFMP43897 325 aaKnown RBP6.05□□□□□ -1.44
CSDE1-213ENST00000530784 CSE1LP55060 971 aaKnown RBP6.05□□□□□ -1.44
CSDE1-213ENST00000530784 CDH11P55287 796 aa6.05□□□□□ -1.44
CSDE1-213ENST00000530784 HSPA14Q0VDF9 509 aa6.05□□□□□ -1.44
CSDE1-213ENST00000530784 PLA2G7Q13093 441 aa6.05□□□□□ -1.44
CSDE1-213ENST00000530784 TMED2Q15363 201 aa6.05□□□□□ -1.44
CSDE1-213ENST00000530784 RBBP7Q16576 425 aa6.05□□□□□ -1.44
CSDE1-213ENST00000530784 TCTE1Q5JU00 501 aa6.05□□□□□ -1.44
CSDE1-213ENST00000530784 AFTPHQ6ULP2 937 aa6.05□□□□□ -1.44
CSDE1-213ENST00000530784 SHISA6Q6ZSJ9 500 aa6.05□□□□□ -1.44
CSDE1-213ENST00000530784 LINC00523Q86TU6 105 aa6.05□□□□□ -1.44
CSDE1-213ENST00000530784 ISCA2Q86U28 154 aa6.05□□□□□ -1.44
CSDE1-213ENST00000530784 KCNMB4Q86W47 210 aa6.05□□□□□ -1.44
CSDE1-213ENST00000530784 SLC22A15Q8IZD6 547 aa6.05□□□□□ -1.44
CSDE1-213ENST00000530784 TC2NQ8N9U0 490 aa6.05□□□□□ -1.44
CSDE1-213ENST00000530784 DNAAF3Q8N9W5 541 aa6.05□□□□□ -1.44
CSDE1-213ENST00000530784 TTC29Q8NA56 475 aaPredicted RBP6.05□□□□□ -1.44
CSDE1-213ENST00000530784 LINC01555Q8NAE3 123 aa6.05□□□□□ -1.44
CSDE1-213ENST00000530784 GRHL3Q8TE85 626 aa6.05□□□□□ -1.44
CSDE1-213ENST00000530784 RAB11FIP5Q9BXF6 653 aa6.05□□□□□ -1.44
CSDE1-213ENST00000530784 RTN4RQ9BZR6 473 aa6.05□□□□□ -1.44
CSDE1-213ENST00000530784 SLC26A1Q9H2B4 701 aa6.05□□□□□ -1.44
CSDE1-213ENST00000530784 TSPY26PQ9H489 355 aa6.05□□□□□ -1.44
CSDE1-213ENST00000530784 HHATLQ9HCP6 504 aa6.05□□□□□ -1.44
CSDE1-213ENST00000530784 CUTCQ9NTM9 273 aa6.05□□□□□ -1.44
CSDE1-213ENST00000530784 CIDEBQ9UHD4 219 aa6.05□□□□□ -1.44
CSDE1-213ENST00000530784 CSAG2Q9Y5P2 127 aa6.05□□□□□ -1.44
CSDE1-213ENST00000530784 SPIN1Q9Y657 262 aaPredicted RBP6.05□□□□□ -1.44
CSDE1-213ENST00000530784 FAM169AQ9Y6X4 670 aa6.05□□□□□ -1.44
CSDE1-213ENST00000530784 PRSS51A0A1B0GVH4 220 aa6.04□□□□□ -1.44
CSDE1-213ENST00000530784 HEATR9A2RTY3 570 aa6.04□□□□□ -1.44
CSDE1-213ENST00000530784 OR2A25A4D2G3 310 aa6.04□□□□□ -1.44
CSDE1-213ENST00000530784 ERI2A8K979 691 aaKnown RBP6.04□□□□□ -1.44
CSDE1-213ENST00000530784 TO15178 435 aa6.04□□□□□ -1.44
CSDE1-213ENST00000530784 OR1I1O60431 355 aa6.04□□□□□ -1.44
CSDE1-213ENST00000530784 GOT2P00505 430 aaKnown RBP6.04□□□□□ -1.44
CSDE1-213ENST00000530784 APOA4P06727 396 aa6.04□□□□□ -1.44
CSDE1-213ENST00000530784 ZNF26P17031 533 aaPredicted RBP6.04□□□□□ -1.44
CSDE1-213ENST00000530784 PSMA3P25788 255 aa6.04□□□□□ -1.44
CSDE1-213ENST00000530784 CCR7P32248 378 aa6.04□□□□□ -1.44
CSDE1-213ENST00000530784 CDH17Q12864 832 aa6.04□□□□□ -1.44
CSDE1-213ENST00000530784 MELKQ14680 651 aa6.04□□□□□ -1.44
CSDE1-213ENST00000530784 NTRK2Q16620 822 aa6.04□□□□□ -1.44
CSDE1-213ENST00000530784 FAM98BQ52LJ0 330 aaKnown RBP6.04□□□□□ -1.44
CSDE1-213ENST00000530784 ZC2HC1BQ5TFG8 222 aa6.04□□□□□ -1.44
CSDE1-213ENST00000530784 TTC23LQ6PF05 361 aa6.04□□□□□ -1.44
CSDE1-213ENST00000530784 IGFL2Q6UWQ7 119 aa6.04□□□□□ -1.44
CSDE1-213ENST00000530784 UNC5DQ6UXZ4 953 aa6.04□□□□□ -1.44
CSDE1-213ENST00000530784 PPP1R21Q6ZMI0 780 aa6.04□□□□□ -1.44
CSDE1-213ENST00000530784 LINC00696Q6ZRV3 163 aa6.04□□□□□ -1.44
CSDE1-213ENST00000530784 COX15Q7KZN9 410 aa6.04□□□□□ -1.44
CSDE1-213ENST00000530784 NLRP9Q7RTR0 991 aa6.04□□□□□ -1.44
CSDE1-213ENST00000530784 SLC34A3Q8N130 599 aa6.04□□□□□ -1.44
CSDE1-213ENST00000530784 RAB42Q8N4Z0 105 aa6.04□□□□□ -1.44
CSDE1-213ENST00000530784 C2orf73Q8N5S3 287 aaPredicted RBP6.04□□□□□ -1.44
CSDE1-213ENST00000530784 UBL4BQ8N7F7 174 aa6.04□□□□□ -1.44
CSDE1-213ENST00000530784 OR52K1Q8NGK4 314 aa6.04□□□□□ -1.44
CSDE1-213ENST00000530784 OR13J1Q8NGT2 312 aa6.04□□□□□ -1.44
CSDE1-213ENST00000530784 OR2L8Q8NGY9 312 aa6.04□□□□□ -1.44
CSDE1-213ENST00000530784 CFAP61Q8NHU2 1237 aa6.04□□□□□ -1.44
CSDE1-213ENST00000530784 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.04□□□□□ -1.44
CSDE1-213ENST00000530784 ASZ1Q8WWH4 475 aa6.04□□□□□ -1.44
CSDE1-213ENST00000530784 RSRC1Q96IZ7 334 aaKnown RBP6.04□□□□□ -1.44
CSDE1-213ENST00000530784 SELENOSQ9BQE4 189 aa6.04□□□□□ -1.44
CSDE1-213ENST00000530784 TMEM121Q9BTD3 319 aa6.04□□□□□ -1.44
CSDE1-213ENST00000530784 ABHD6Q9BV23 337 aa6.04□□□□□ -1.44
CSDE1-213ENST00000530784 EGLN1Q9GZT9 426 aa6.04□□□□□ -1.44
CSDE1-213ENST00000530784 PPIL3Q9H2H8 161 aaKnown RBP6.04□□□□□ -1.44
CSDE1-213ENST00000530784 GIMAP4Q9NUV9 329 aa6.04□□□□□ -1.44
CSDE1-213ENST00000530784 CTSFQ9UBX1 484 aa6.04□□□□□ -1.44
CSDE1-213ENST00000530784 SLC7A7Q9UM01 511 aa6.04□□□□□ -1.44
CSDE1-213ENST00000530784 A0A087X002 238 aa6.03□□□□□ -1.44
CSDE1-213ENST00000530784 A0A1B0GUH1 482 aa6.03□□□□□ -1.44
CSDE1-213ENST00000530784 ELOVL7A1L3X0 281 aa6.03□□□□□ -1.44
CSDE1-213ENST00000530784 HYKKA2RU49 373 aa6.03□□□□□ -1.44
CSDE1-213ENST00000530784 IQCF5A8MTL0 148 aa6.03□□□□□ -1.44
CSDE1-213ENST00000530784 BTNL10A8MVZ5 291 aa6.03□□□□□ -1.44
CSDE1-213ENST00000530784 MIF4GDA9UHW6 222 aaKnown RBP6.03□□□□□ -1.44
CSDE1-213ENST00000530784 RASGRF2O14827 1237 aa6.03□□□□□ -1.44
CSDE1-213ENST00000530784 SRPX2O60687 465 aaPredicted RBP6.03□□□□□ -1.44
CSDE1-213ENST00000530784 HPP00738 406 aa6.03□□□□□ -1.44
CSDE1-213ENST00000530784 NGFP01138 241 aa6.03□□□□□ -1.44
CSDE1-213ENST00000530784 UQCRHP07919 91 aa6.03□□□□□ -1.44
CSDE1-213ENST00000530784 FRMD6-AS1P0C7T7 363 aa6.03□□□□□ -1.44
CSDE1-213ENST00000530784 OR1D4P47884 311 aa6.03□□□□□ -1.44
CSDE1-213ENST00000530784 VSX2P58304 361 aaPredicted RBP6.03□□□□□ -1.44
CSDE1-213ENST00000530784 ARG2P78540 354 aa6.03□□□□□ -1.44
CSDE1-213ENST00000530784 ACVR1Q04771 509 aa6.03□□□□□ -1.44
CSDE1-213ENST00000530784 KLC1Q07866 573 aa6.03□□□□□ -1.44
CSDE1-213ENST00000530784 GRB7Q14451 532 aa6.03□□□□□ -1.44
CSDE1-213ENST00000530784 FASTKD1Q53R41 847 aaKnown RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms