RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 DEFB126Q9BYW3 111 aa13.2□□□□□ -0.3
TTC39A-216ENST00000530004 UCK2Q9BZX2 261 aa13.2□□□□□ -0.3
TTC39A-216ENST00000530004 ZNF696Q9H7X3 374 aa13.2□□□□□ -0.3
TTC39A-216ENST00000530004 NDRG4Q9ULP0 352 aaKnown RBP13.2□□□□□ -0.3
TTC39A-216ENST00000530004 SLC35A3Q9Y2D2 325 aa13.2□□□□□ -0.3
TTC39A-216ENST00000530004 GMPPBQ9Y5P6 360 aa13.2□□□□□ -0.3
TTC39A-216ENST00000530004 H3BNH8 94 aa13.19□□□□□ -0.3
TTC39A-216ENST00000530004 ADAM11O75078 769 aa13.19□□□□□ -0.3
TTC39A-216ENST00000530004 ZFAND5O76080 213 aa13.19□□□□□ -0.3
TTC39A-216ENST00000530004 LCN1P31025 176 aa13.19□□□□□ -0.3
TTC39A-216ENST00000530004 ACAA2P42765 397 aaKnown RBP13.19□□□□□ -0.3
TTC39A-216ENST00000530004 NRG3P56975 720 aa13.19□□□□□ -0.3
TTC39A-216ENST00000530004 PSPHP78330 225 aa13.19□□□□□ -0.3
TTC39A-216ENST00000530004 RPP38P78345 283 aaKnown RBP13.19□□□□□ -0.3
TTC39A-216ENST00000530004 Q6ZPB1 254 aaPredicted RBP13.19□□□□□ -0.3
TTC39A-216ENST00000530004 ZER1Q7Z7L7 766 aa13.19□□□□□ -0.3
TTC39A-216ENST00000530004 TOR1AIP2Q8NFQ8 470 aa13.19□□□□□ -0.3
TTC39A-216ENST00000530004 OR5L2Q8NGL0 311 aa13.19□□□□□ -0.3
TTC39A-216ENST00000530004 THOC3Q96J01 351 aaKnown RBP13.19□□□□□ -0.3
TTC39A-216ENST00000530004 DGCR6LQ9BY27 220 aa13.19□□□□□ -0.3
TTC39A-216ENST00000530004 TMEM27Q9HBJ8 222 aa13.19□□□□□ -0.3
TTC39A-216ENST00000530004 ENOPH1Q9UHY7 261 aa13.19□□□□□ -0.3
TTC39A-216ENST00000530004 KCNMB2Q9Y691 235 aa13.19□□□□□ -0.3
TTC39A-216ENST00000530004 TMEM200CA6NKL6 621 aa13.18□□□□□ -0.3
TTC39A-216ENST00000530004 E9PQ18 207 aa13.18□□□□□ -0.3
TTC39A-216ENST00000530004 ITGA3P26006 1051 aa13.18□□□□□ -0.3
TTC39A-216ENST00000530004 IFNGR2P38484 337 aa13.18□□□□□ -0.3
TTC39A-216ENST00000530004 ADH7P40394 386 aa13.18□□□□□ -0.3
TTC39A-216ENST00000530004 RPS6KA3P51812 740 aa13.18□□□□□ -0.3
TTC39A-216ENST00000530004 PNLIPRP2P54317 469 aa13.18□□□□□ -0.3
TTC39A-216ENST00000530004 SOX8P57073 446 aa13.18□□□□□ -0.3
TTC39A-216ENST00000530004 IL5RAQ01344 420 aa13.18□□□□□ -0.3
TTC39A-216ENST00000530004 CD226Q15762 336 aa13.18□□□□□ -0.3
TTC39A-216ENST00000530004 FNDC7Q5VTL7 733 aa13.18□□□□□ -0.3
TTC39A-216ENST00000530004 JMJD6Q6NYC1 403 aaPredicted RBP13.18□□□□□ -0.3
TTC39A-216ENST00000530004 C1orf94Q6P1W5 598 aa13.18□□□□□ -0.3
TTC39A-216ENST00000530004 ZNF613Q6PF04 617 aa13.18□□□□□ -0.3
TTC39A-216ENST00000530004 APOOLQ6UXV4 268 aa13.18□□□□□ -0.3
TTC39A-216ENST00000530004 RRM2BQ7LG56 351 aa13.18□□□□□ -0.3
TTC39A-216ENST00000530004 APLFQ8IW19 511 aaPredicted RBP13.18□□□□□ -0.3
TTC39A-216ENST00000530004 GALNT16Q8N428 558 aa13.18□□□□□ -0.3
TTC39A-216ENST00000530004 SETD9Q8NE22 299 aa13.18□□□□□ -0.3
TTC39A-216ENST00000530004 RNF217Q8TC41 542 aa13.18□□□□□ -0.3
TTC39A-216ENST00000530004 PHOSPHO1Q8TCT1 267 aa13.18□□□□□ -0.3
TTC39A-216ENST00000530004 GRHL3Q8TE85 626 aa13.18□□□□□ -0.3
TTC39A-216ENST00000530004 TMEM255BQ8WV15 326 aa13.18□□□□□ -0.3
TTC39A-216ENST00000530004 SNRNP27Q8WVK2 155 aaKnown RBP13.18□□□□□ -0.3
TTC39A-216ENST00000530004 ACOT11Q8WXI4 607 aaPredicted RBP13.18□□□□□ -0.3
TTC39A-216ENST00000530004 PSMF1Q92530 271 aa13.18□□□□□ -0.3
TTC39A-216ENST00000530004 PITX2Q99697 317 aa13.18□□□□□ -0.3
TTC39A-216ENST00000530004 APOL4Q9BPW4 351 aa13.18□□□□□ -0.3
TTC39A-216ENST00000530004 LHPPQ9H008 270 aa13.18□□□□□ -0.3
TTC39A-216ENST00000530004 WWP2O00308 870 aa13.17□□□□□ -0.3
TTC39A-216ENST00000530004 UBL4AP11441 157 aa13.17□□□□□ -0.3
TTC39A-216ENST00000530004 OSMP13725 252 aa13.17□□□□□ -0.3
TTC39A-216ENST00000530004 ELK4P28324 431 aa13.17□□□□□ -0.3
TTC39A-216ENST00000530004 RYKP34925 604 aa13.17□□□□□ -0.3
TTC39A-216ENST00000530004 GSSP48637 474 aa13.17□□□□□ -0.3
TTC39A-216ENST00000530004 ISL1P61371 349 aa13.17□□□□□ -0.3
TTC39A-216ENST00000530004 CD47Q08722 323 aa13.17□□□□□ -0.3
TTC39A-216ENST00000530004 CTU2Q2VPK5 515 aaKnown RBP13.17□□□□□ -0.3
TTC39A-216ENST00000530004 H3F3CQ6NXT2 135 aa13.17□□□□□ -0.3
TTC39A-216ENST00000530004 MBOAT2Q6ZWT7 520 aa13.17□□□□□ -0.3
TTC39A-216ENST00000530004 PRICKLE2Q7Z3G6 844 aa13.17□□□□□ -0.3
TTC39A-216ENST00000530004 FAM71CQ8NEG0 241 aa13.17□□□□□ -0.3
TTC39A-216ENST00000530004 BRIX1Q8TDN6 353 aaKnown RBP13.17□□□□□ -0.3
TTC39A-216ENST00000530004 HRASLS5Q96KN8 279 aa13.17□□□□□ -0.3
TTC39A-216ENST00000530004 PRSS27Q9BQR3 290 aa13.17□□□□□ -0.3
TTC39A-216ENST00000530004 TRIM2Q9C040 744 aa13.17□□□□□ -0.3
TTC39A-216ENST00000530004 ZBTB20Q9HC78 741 aaPredicted RBP13.17□□□□□ -0.3
TTC39A-216ENST00000530004 MYOTQ9UBF9 498 aa13.17□□□□□ -0.3
TTC39A-216ENST00000530004 NPFFR2Q9Y5X5 522 aa13.17□□□□□ -0.3
TTC39A-216ENST00000530004 A0A1B0GWA3 101 aa13.17□□□□□ -0.3
TTC39A-216ENST00000530004 OR6C70A6NIJ9 312 aa13.17□□□□□ -0.3
TTC39A-216ENST00000530004 GTPBP1O00178 669 aaKnown RBP13.17□□□□□ -0.3
TTC39A-216ENST00000530004 LYPD3O95274 346 aa13.17□□□□□ -0.3
TTC39A-216ENST00000530004 SMIM18P0DKX4 95 aa13.17□□□□□ -0.3
TTC39A-216ENST00000530004 CHMP24386 653 aa13.17□□□□□ -0.3
TTC39A-216ENST00000530004 ESRRGP62508 458 aa13.17□□□□□ -0.3
TTC39A-216ENST00000530004 MEP1AQ16819 746 aa13.17□□□□□ -0.3
TTC39A-216ENST00000530004 MEX3DQ86XN8 651 aaKnown RBP13.17□□□□□ -0.3
TTC39A-216ENST00000530004 ZNF440Q8IYI8 595 aa13.17□□□□□ -0.3
TTC39A-216ENST00000530004 ARMC10Q8N2F6 343 aa13.17□□□□□ -0.3
TTC39A-216ENST00000530004 SIRT6Q8N6T7 355 aa13.17□□□□□ -0.3
TTC39A-216ENST00000530004 LSMEM1Q8N8F7 131 aa13.17□□□□□ -0.3
TTC39A-216ENST00000530004 PIGXQ8TBF5 258 aa13.17□□□□□ -0.3
TTC39A-216ENST00000530004 GNPDA2Q8TDQ7 276 aa13.17□□□□□ -0.3
TTC39A-216ENST00000530004 GPA33Q99795 319 aa13.17□□□□□ -0.3
TTC39A-216ENST00000530004 REV1Q9UBZ9 1251 aa13.17□□□□□ -0.3
TTC39A-216ENST00000530004 ZMIZ1Q9ULJ6 1067 aa13.17□□□□□ -0.3
TTC39A-216ENST00000530004 HSPE1-MOB4S4R3N1 261 aa13.17□□□□□ -0.3
TTC39A-216ENST00000530004 ZFHX4Q86UP3 3567 aa13.17□□□□□ -0.3
TTC39A-216ENST00000530004 A0A0B4J2E0 115 aa13.16□□□□□ -0.3
TTC39A-216ENST00000530004 A0A1B0GX12 115 aa13.16□□□□□ -0.3
TTC39A-216ENST00000530004 ZNF264O43296 627 aa13.16□□□□□ -0.3
TTC39A-216ENST00000530004 OIP5O43482 229 aa13.16□□□□□ -0.3
TTC39A-216ENST00000530004 PIP5K1CO60331 668 aa13.16□□□□□ -0.3
TTC39A-216ENST00000530004 ZNF354AO60765 605 aaPredicted RBP13.16□□□□□ -0.3
TTC39A-216ENST00000530004 PPM1BO75688 479 aa13.16□□□□□ -0.3
TTC39A-216ENST00000530004 SMNDC1O75940 238 aaKnown RBP eCLIP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms