RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 STACQ99469 402 aa7.63□□□□□ -1.19
SSBP3-212ENST00000528930 PRPF18Q99633 342 aaKnown RBP7.63□□□□□ -1.19
SSBP3-212ENST00000528930 YIPF4Q9BSR8 244 aa7.63□□□□□ -1.19
SSBP3-212ENST00000528930 DSN1Q9H410 356 aa7.63□□□□□ -1.19
SSBP3-212ENST00000528930 MANSC1Q9H8J5 431 aa7.63□□□□□ -1.19
SSBP3-212ENST00000528930 ZCCHC3Q9NUD5 404 aaKnown RBP7.63□□□□□ -1.19
SSBP3-212ENST00000528930 GPATCH2Q9NW75 528 aa7.63□□□□□ -1.19
SSBP3-212ENST00000528930 FAM120CQ9NX05 1096 aaKnown RBP7.63□□□□□ -1.19
SSBP3-212ENST00000528930 GIN1Q9NXP7 522 aa7.63□□□□□ -1.19
SSBP3-212ENST00000528930 PPP4R1LQ9P1A2 415 aa7.63□□□□□ -1.19
SSBP3-212ENST00000528930 MRTO4Q9UKD2 239 aaKnown RBP7.63□□□□□ -1.19
SSBP3-212ENST00000528930 ABCG2Q9UNQ0 655 aa7.63□□□□□ -1.19
SSBP3-212ENST00000528930 IGLV3-32A0A0A0MS00 114 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 CCT8L1PA6NM43 557 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 ALG1L2C9J202 215 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 LINC01387J3KSC0 135 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 ZNF195O14628 629 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 KLF11O14901 512 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 HDAC3O15379 428 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 AHCYL1O43865 530 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 UTS2O95399 124 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 ANGPTL1O95841 491 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 ACTL6AO96019 429 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 FESP07332 822 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 NGFRP08138 427 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 ALOX5P09917 674 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 CPN1P15169 458 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 DPP4P27487 766 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 CEACAM8P31997 349 aaPredicted RBP7.62□□□□□ -1.19
SSBP3-212ENST00000528930 TIMP3P35625 211 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 ZFP36L2P47974 494 aaKnown RBP7.62□□□□□ -1.19
SSBP3-212ENST00000528930 PRIM2P49643 509 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 STARP49675 285 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 LHX2P50458 406 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 DSCR4P56555 118 aaPredicted RBP7.62□□□□□ -1.19
SSBP3-212ENST00000528930 B3GALT5-AS1P59052 145 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 LASP1Q14847 261 aaKnown RBP7.62□□□□□ -1.19
SSBP3-212ENST00000528930 PGS1Q32NB8 556 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 FAM174BQ3ZCQ3 159 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 ACSF3Q4G176 576 aaPredicted RBP7.62□□□□□ -1.19
SSBP3-212ENST00000528930 RIPPLY2Q5TAB7 128 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 ATG16L1Q676U5 607 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 CDC73Q6P1J9 531 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 POMZP3Q6PJE2 187 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 MAVSQ7Z434 540 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 PIGWQ7Z7B1 504 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 ADGRE4PQ86SQ3 457 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 TRIM42Q8IWZ5 723 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 PM20D2Q8IYS1 436 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 CLECL1Q8IZS7 167 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 ANKS4BQ8N8V4 417 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 NAXEQ8NCW5 288 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 TNIP2Q8NFZ5 429 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 OR56A1Q8NGH5 318 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 OR10Q1Q8NGQ4 319 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 OR14L1PQ8NHC6 308 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 SFXN5Q8TD22 340 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 ZNF75CPQ92670 426 aaPredicted RBP7.62□□□□□ -1.19
SSBP3-212ENST00000528930 TESCQ96BS2 214 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 MAELQ96JY0 434 aaKnown RBP7.62□□□□□ -1.19
SSBP3-212ENST00000528930 TEX37Q96LM6 180 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 G6PC3Q9BUM1 346 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 BTBD2Q9BX70 525 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 ACTRT3Q9BYD9 372 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 DPY30Q9C005 99 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 PIGUQ9H490 435 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 SERHL2Q9H4I8 314 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 WDR55Q9H6Y2 383 aaPredicted RBP7.62□□□□□ -1.19
SSBP3-212ENST00000528930 YAE1D1Q9NRH1 226 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 DUSP22Q9NRW4 184 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 NKIRAS1Q9NYS0 192 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 TAS2R10Q9NYW0 307 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 MED11Q9P086 117 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 MARCOQ9UEW3 520 aaPredicted RBP7.62□□□□□ -1.19
SSBP3-212ENST00000528930 CAMK2AQ9UQM7 478 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 SNX8Q9Y5X2 465 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 KCNE3Q9Y6H6 103 aa7.62□□□□□ -1.19
SSBP3-212ENST00000528930 GOLGA8QA0A0J9YX86 632 aa7.61□□□□□ -1.19
SSBP3-212ENST00000528930 PRSS51A0A1B0GVH4 220 aa7.61□□□□□ -1.19
SSBP3-212ENST00000528930 GOLGA8OA6NCC3 632 aa7.61□□□□□ -1.19
SSBP3-212ENST00000528930 A6NHS1 94 aa7.61□□□□□ -1.19
SSBP3-212ENST00000528930 CD8B2A6NJW9 211 aa7.61□□□□□ -1.19
SSBP3-212ENST00000528930 CLCA1A8K7I4 914 aa7.61□□□□□ -1.19
SSBP3-212ENST00000528930 GOLGA8NF8WBI6 632 aa7.61□□□□□ -1.19
SSBP3-212ENST00000528930 RNASET2O00584 256 aaKnown RBP7.61□□□□□ -1.19
SSBP3-212ENST00000528930 GSC2O15499 205 aa7.61□□□□□ -1.19
SSBP3-212ENST00000528930 CFLARO15519 480 aa7.61□□□□□ -1.19
SSBP3-212ENST00000528930 ATP6V1G2O95670 118 aa7.61□□□□□ -1.19
SSBP3-212ENST00000528930 OXSR1O95747 527 aaPredicted RBP7.61□□□□□ -1.19
SSBP3-212ENST00000528930 HRGP04196 525 aa7.61□□□□□ -1.19
SSBP3-212ENST00000528930 PGRP06401 933 aa7.61□□□□□ -1.19
SSBP3-212ENST00000528930 KITP10721 976 aa7.61□□□□□ -1.19
SSBP3-212ENST00000528930 ZNF708P17019 499 aa7.61□□□□□ -1.19
SSBP3-212ENST00000528930 TBXA2RP21731 343 aa7.61□□□□□ -1.19
SSBP3-212ENST00000528930 CHMP24386 653 aa7.61□□□□□ -1.19
SSBP3-212ENST00000528930 EPHA3P29320 983 aa7.61□□□□□ -1.19
SSBP3-212ENST00000528930 IL12AP29459 219 aa7.61□□□□□ -1.19
SSBP3-212ENST00000528930 LCN1P31025 176 aa7.61□□□□□ -1.19
SSBP3-212ENST00000528930 CLK3P49761 638 aaKnown RBP7.61□□□□□ -1.19
SSBP3-212ENST00000528930 CLDN15P56746 228 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms