RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 HK1P19367 917 aa9.74□□□□□ -0.85
NEDD8-205ENST00000527046 TNFRSF1BP20333 461 aa9.74□□□□□ -0.85
NEDD8-205ENST00000527046 HTR2AP28223 471 aa9.74□□□□□ -0.85
NEDD8-205ENST00000527046 SUCLG1P53597 346 aaKnown RBP9.74□□□□□ -0.85
NEDD8-205ENST00000527046 SUMO3P55854 103 aaPredicted RBP9.74□□□□□ -0.85
NEDD8-205ENST00000527046 SESN3P58005 492 aa9.74□□□□□ -0.85
NEDD8-205ENST00000527046 SELENOWP63302 87 aa9.74□□□□□ -0.85
NEDD8-205ENST00000527046 QPRTQ15274 297 aa9.74□□□□□ -0.85
NEDD8-205ENST00000527046 SPATS1Q496A3 300 aa9.74□□□□□ -0.85
NEDD8-205ENST00000527046 LIN52Q52LA3 116 aa9.74□□□□□ -0.85
NEDD8-205ENST00000527046 CYBRD1Q53TN4 286 aa9.74□□□□□ -0.85
NEDD8-205ENST00000527046 SAMD4BQ5PRF9 694 aaKnown RBP9.74□□□□□ -0.85
NEDD8-205ENST00000527046 CBLL1Q75N03 491 aa9.74□□□□□ -0.85
NEDD8-205ENST00000527046 ADGRG3Q86Y34 549 aa9.74□□□□□ -0.85
NEDD8-205ENST00000527046 ARMC8Q8IUR7 673 aa9.74□□□□□ -0.85
NEDD8-205ENST00000527046 ST6GALNAC3Q8NDV1 305 aa9.74□□□□□ -0.85
NEDD8-205ENST00000527046 OR4K17Q8NGC6 315 aa9.74□□□□□ -0.85
NEDD8-205ENST00000527046 SLC35B4Q969S0 331 aa9.74□□□□□ -0.85
NEDD8-205ENST00000527046 UTP4Q969X6 686 aaKnown RBP9.74□□□□□ -0.85
NEDD8-205ENST00000527046 UGT2B28Q9BY64 529 aa9.74□□□□□ -0.85
NEDD8-205ENST00000527046 NDE1Q9NXR1 346 aa9.74□□□□□ -0.85
NEDD8-205ENST00000527046 TAS2R10Q9NYW0 307 aa9.74□□□□□ -0.85
NEDD8-205ENST00000527046 PRPF19Q9UMS4 504 aaKnown RBP9.74□□□□□ -0.85
NEDD8-205ENST00000527046 ZNF232Q9UNY5 417 aa9.74□□□□□ -0.85
NEDD8-205ENST00000527046 VDAC3Q9Y277 283 aa9.74□□□□□ -0.85
NEDD8-205ENST00000527046 SNX13Q9Y5W8 968 aa9.74□□□□□ -0.85
NEDD8-205ENST00000527046 TRGV5A0A0B4J1U4 118 aa9.73□□□□□ -0.85
NEDD8-205ENST00000527046 H3BNH8 94 aa9.73□□□□□ -0.85
NEDD8-205ENST00000527046 M0R3H8 397 aa9.73□□□□□ -0.85
NEDD8-205ENST00000527046 ACOT7O00154 380 aa9.73□□□□□ -0.85
NEDD8-205ENST00000527046 SYT5O00445 386 aa9.73□□□□□ -0.85
NEDD8-205ENST00000527046 AQP7O14520 342 aa9.73□□□□□ -0.85
NEDD8-205ENST00000527046 HCN1O60741 890 aa9.73□□□□□ -0.85
NEDD8-205ENST00000527046 SERPINB7O75635 380 aa9.73□□□□□ -0.85
NEDD8-205ENST00000527046 CYP7B1O75881 506 aa9.73□□□□□ -0.85
NEDD8-205ENST00000527046 PDE5AO76074 875 aa9.73□□□□□ -0.85
NEDD8-205ENST00000527046 ATP6V1B2P21281 511 aa9.73□□□□□ -0.85
NEDD8-205ENST00000527046 TCEA1P23193 301 aaKnown RBP9.73□□□□□ -0.85
NEDD8-205ENST00000527046 SHC1P29353 583 aa9.73□□□□□ -0.85
NEDD8-205ENST00000527046 RYKP34925 604 aa9.73□□□□□ -0.85
NEDD8-205ENST00000527046 UQCRFS1P47985 274 aa9.73□□□□□ -0.85
NEDD8-205ENST00000527046 IDH2P48735 452 aaKnown RBP9.73□□□□□ -0.85
NEDD8-205ENST00000527046 LHX2P50458 406 aa9.73□□□□□ -0.85
NEDD8-205ENST00000527046 CLDN18P56856 261 aa9.73□□□□□ -0.85
NEDD8-205ENST00000527046 MXRA7P84157 204 aa9.73□□□□□ -0.85
NEDD8-205ENST00000527046 MRPL49Q13405 166 aaKnown RBP9.73□□□□□ -0.85
NEDD8-205ENST00000527046 ELOAQ14241 798 aaKnown RBP9.73□□□□□ -0.85
NEDD8-205ENST00000527046 TRIM25Q14258 630 aaKnown RBP9.73□□□□□ -0.85
NEDD8-205ENST00000527046 LARS2Q15031 903 aaKnown RBP9.73□□□□□ -0.85
NEDD8-205ENST00000527046 CTU2Q2VPK5 515 aaKnown RBP9.73□□□□□ -0.85
NEDD8-205ENST00000527046 INTS11Q5TA45 600 aaKnown RBP9.73□□□□□ -0.85
NEDD8-205ENST00000527046 Q6ZPB1 254 aaPredicted RBP9.73□□□□□ -0.85
NEDD8-205ENST00000527046 VTCN1Q7Z7D3 282 aa9.73□□□□□ -0.85
NEDD8-205ENST00000527046 KRT73Q86Y46 540 aa9.73□□□□□ -0.85
NEDD8-205ENST00000527046 ARHGAP24Q8N264 748 aa9.73□□□□□ -0.85
NEDD8-205ENST00000527046 GTPBP8Q8N3Z3 284 aaPredicted RBP9.73□□□□□ -0.85
NEDD8-205ENST00000527046 OR52E4Q8NGH9 312 aa9.73□□□□□ -0.85
NEDD8-205ENST00000527046 OR6T1Q8NGN1 323 aa9.73□□□□□ -0.85
NEDD8-205ENST00000527046 FIG4Q92562 907 aa9.73□□□□□ -0.85
NEDD8-205ENST00000527046 WDYHV1Q96HA8 205 aa9.73□□□□□ -0.85
NEDD8-205ENST00000527046 ZNF607Q96SK3 696 aa9.73□□□□□ -0.85
NEDD8-205ENST00000527046 THTPAQ9BU02 230 aa9.73□□□□□ -0.85
NEDD8-205ENST00000527046 PTGES2Q9H7Z7 377 aa9.73□□□□□ -0.85
NEDD8-205ENST00000527046 AGPAT4Q9NRZ5 378 aa9.73□□□□□ -0.85
NEDD8-205ENST00000527046 ACER3Q9NUN7 267 aa9.73□□□□□ -0.85
NEDD8-205ENST00000527046 DCAF13Q9NV06 445 aaKnown RBP9.73□□□□□ -0.85
NEDD8-205ENST00000527046 SEC14L3Q9UDX4 400 aa9.73□□□□□ -0.85
NEDD8-205ENST00000527046 RPH3AQ9Y2J0 694 aaPredicted RBP9.73□□□□□ -0.85
NEDD8-205ENST00000527046 POLEQ07864 2286 aa9.73□□□□□ -0.85
NEDD8-205ENST00000527046 A0A087WZY1 265 aa9.72□□□□□ -0.85
NEDD8-205ENST00000527046 CFAP73A6NFT4 308 aa9.72□□□□□ -0.85
NEDD8-205ENST00000527046 H0YC42 278 aa9.72□□□□□ -0.85
NEDD8-205ENST00000527046 PYCARD-AS1I3L0S3 204 aa9.72□□□□□ -0.85
NEDD8-205ENST00000527046 ARPC2O15144 300 aa9.72□□□□□ -0.85
NEDD8-205ENST00000527046 GYG2O15488 501 aa9.72□□□□□ -0.85
NEDD8-205ENST00000527046 ME2P23368 584 aa9.72□□□□□ -0.85
NEDD8-205ENST00000527046 CHMP24386 653 aa9.72□□□□□ -0.85
NEDD8-205ENST00000527046 OR1E2P47887 323 aa9.72□□□□□ -0.85
NEDD8-205ENST00000527046 TPD52P55327 224 aaPredicted RBP9.72□□□□□ -0.85
NEDD8-205ENST00000527046 CLDN20P56880 219 aa9.72□□□□□ -0.85
NEDD8-205ENST00000527046 SRSF1Q07955 248 aaKnown RBP eCLIP9.72□□□□□ -0.85
NEDD8-205ENST00000527046 C19orf57Q0VDD7 668 aa9.72□□□□□ -0.85
NEDD8-205ENST00000527046 FOXF1Q12946 379 aa9.72□□□□□ -0.85
NEDD8-205ENST00000527046 CBFBQ13951 182 aa9.72□□□□□ -0.85
NEDD8-205ENST00000527046 GANABQ14697 944 aaKnown RBP9.72□□□□□ -0.85
NEDD8-205ENST00000527046 ZSWIM7Q19AV6 140 aa9.72□□□□□ -0.85
NEDD8-205ENST00000527046 GXYLT1Q4G148 440 aa9.72□□□□□ -0.85
NEDD8-205ENST00000527046 RTL6Q6ICC9 239 aa9.72□□□□□ -0.85
NEDD8-205ENST00000527046 ENPP6Q6UWR7 440 aa9.72□□□□□ -0.85
NEDD8-205ENST00000527046 LINC00114Q6XXX2 140 aa9.72□□□□□ -0.85
NEDD8-205ENST00000527046 PLEKHM3Q6ZWE6 761 aa9.72□□□□□ -0.85
NEDD8-205ENST00000527046 GGNQ86UU5 652 aa9.72□□□□□ -0.85
NEDD8-205ENST00000527046 GHDCQ8N2G8 530 aa9.72□□□□□ -0.85
NEDD8-205ENST00000527046 LSMEM1Q8N8F7 131 aa9.72□□□□□ -0.85
NEDD8-205ENST00000527046 OR14L1PQ8NHC6 308 aa9.72□□□□□ -0.85
NEDD8-205ENST00000527046 ADGRG7Q96K78 797 aa9.72□□□□□ -0.85
NEDD8-205ENST00000527046 C7orf34Q96L11 122 aa9.72□□□□□ -0.85
NEDD8-205ENST00000527046 SPATA5L1Q9BVQ7 753 aa9.72□□□□□ -0.85
NEDD8-205ENST00000527046 AMBRA1Q9C0C7 1298 aa9.72□□□□□ -0.85
NEDD8-205ENST00000527046 LRMDAQ9H2I8 198 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms