RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 PLA2G16P53816 162 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 CLDN6P56747 220 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 RAB8AP61006 207 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 SKP1P63208 163 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 BTN3A2P78410 334 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 EMX2Q04743 252 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 LTBQ06643 244 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 CRYZQ08257 329 aaKnown RBP4.13□□□□□ -1.75
USP48-211ENST00000526044 ACSM2AQ08AH3 577 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 CHAF1BQ13112 559 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 MAD2L1Q13257 205 aaPredicted RBP4.13□□□□□ -1.75
USP48-211ENST00000526044 SLAMF1Q13291 335 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 FAM53BQ14153 422 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 HERC3Q15034 1050 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 KIAA0040Q15053 153 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 SMU1Q2TAY7 513 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 HKDC1Q2TB90 917 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 ADPRMQ3LIE5 342 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 SLC9B1Q4ZJI4 515 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 RFTN2Q52LD8 501 aaPredicted RBP4.13□□□□□ -1.75
USP48-211ENST00000526044 SPIN4Q56A73 249 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 C6orf136Q5SQH8 315 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 CCNYL2Q5T2Q4 361 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 GKAP1Q5VSY0 366 aaPredicted RBP4.13□□□□□ -1.75
USP48-211ENST00000526044 METTL21CQ5VZV1 264 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 FAM219BQ5XKK7 198 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 ACSM2BQ68CK6 577 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 NIPAL1Q6NVV3 410 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 NOXRED1Q6NXP6 359 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 C16orf87Q6PH81 154 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 CYP20A1Q6UW02 462 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 CEACAM20Q6UY09 585 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 H1FNTQ75WM6 255 aaPredicted RBP4.13□□□□□ -1.75
USP48-211ENST00000526044 ABHD13Q7L211 337 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 PAGE2Q7Z2X7 111 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 SPATA21Q7Z572 469 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 SPATA19Q7Z5L4 167 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 PIGWQ7Z7B1 504 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 PATL1Q86TB9 770 aaKnown RBP4.13□□□□□ -1.75
USP48-211ENST00000526044 ZFAND4Q86XD8 727 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 TMEM126BQ8IUX1 230 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 METTL4Q8N3J2 472 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 C1orf52Q8N6N3 182 aaKnown RBP4.13□□□□□ -1.75
USP48-211ENST00000526044 BMPERQ8N8U9 685 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 ZBTB8BQ8NAP8 495 aaPredicted RBP4.13□□□□□ -1.75
USP48-211ENST00000526044 FNDC5Q8NAU1 212 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 OR2L5Q8NG80 312 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 OR2T11Q8NH01 316 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 SPATA3Q8NHX4 192 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 ELP5Q8TE02 316 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 TMEM170AQ8WVE7 144 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 RNF183Q96D59 192 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 C3orf30Q96M34 536 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 QRFPRQ96P65 431 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 HBEGFQ99075 208 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 CTRCQ99895 268 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 C17orf62Q9BQA9 187 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 CCDC28BQ9BUN5 200 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 ACPTQ9BZG2 426 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 NPFFR1Q9GZQ6 430 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 RABEP2Q9H5N1 569 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 DDX31Q9H8H2 851 aaKnown RBP4.13□□□□□ -1.75
USP48-211ENST00000526044 COPS7BQ9H9Q2 264 aaPredicted RBP4.13□□□□□ -1.75
USP48-211ENST00000526044 CLK4Q9HAZ1 481 aaKnown RBP4.13□□□□□ -1.75
USP48-211ENST00000526044 LRTM1Q9HBL6 345 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 ANKHQ9HCJ1 492 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 TCF7L2Q9NQB0 619 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 CUTCQ9NTM9 273 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 TXLNGQ9NUQ3 528 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 C1orf109Q9NX04 203 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 C5AR2Q9P296 337 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 SATB2Q9UPW6 733 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 CAMK2AQ9UQM7 478 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 EIF3LQ9Y262 564 aaKnown RBP4.13□□□□□ -1.75
USP48-211ENST00000526044 WBP11Q9Y2W2 641 aaKnown RBP4.13□□□□□ -1.75
USP48-211ENST00000526044 NAALAD2Q9Y3Q0 740 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 LOXL2Q9Y4K0 774 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 CCL27Q9Y4X3 112 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 COL27A1Q8IZC6 1860 aaPredicted RBP4.13□□□□□ -1.75
USP48-211ENST00000526044 DNAH14Q0VDD8 3507 aa4.13□□□□□ -1.75
USP48-211ENST00000526044 SCN2AQ99250 2005 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 VPS13AQ96RL7 3174 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 A0A0A6YYC8 382 aaPredicted RBP4.12□□□□□ -1.75
USP48-211ENST00000526044 A0A0G2JN53 185 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.12□□□□□ -1.75
USP48-211ENST00000526044 GNG14A0A1W2PPG7 69 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 H0YIG0 161 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 H3BMH7 237 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 I3L1I5 382 aaPredicted RBP4.12□□□□□ -1.75
USP48-211ENST00000526044 SGK494L7N484 410 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 GTPBP1O00178 669 aaKnown RBP4.12□□□□□ -1.75
USP48-211ENST00000526044 PLPP1O14494 284 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 NDUFAB1O14561 156 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 UBDO15205 165 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 P2RX6O15547 441 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 ADAM20O43506 726 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 SLC25A17O43808 307 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 SNX3O60493 162 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 GALR3O60755 368 aaPredicted RBP4.12□□□□□ -1.75
USP48-211ENST00000526044 CCDC22O60826 627 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms