RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 STAC2Q6ZMT1 411 aa18.47■□□□□ 0.55
SDCBP-209ENST00000522243 NUFIP2Q7Z417 695 aaKnown RBP18.47■□□□□ 0.55
SDCBP-209ENST00000522243 TOR1AIP2Q8NFQ8 470 aa18.47■□□□□ 0.55
SDCBP-209ENST00000522243 RNF128Q8TEB7 428 aa18.47■□□□□ 0.55
SDCBP-209ENST00000522243 ZFP90Q8TF47 636 aa18.47■□□□□ 0.55
SDCBP-209ENST00000522243 CPNE4Q96A23 557 aaPredicted RBP18.47■□□□□ 0.55
SDCBP-209ENST00000522243 TESCQ96BS2 214 aa18.47■□□□□ 0.55
SDCBP-209ENST00000522243 MARK4Q96L34 752 aa18.47■□□□□ 0.55
SDCBP-209ENST00000522243 MRGPRX4Q96LA9 322 aa18.47■□□□□ 0.55
SDCBP-209ENST00000522243 THUMPD3Q9BV44 507 aaKnown RBP18.47■□□□□ 0.55
SDCBP-209ENST00000522243 NMUR2Q9GZQ4 415 aa18.47■□□□□ 0.55
SDCBP-209ENST00000522243 QRSL1Q9H0R6 528 aaKnown RBP18.47■□□□□ 0.55
SDCBP-209ENST00000522243 GSX1Q9H4S2 264 aaPredicted RBP18.47■□□□□ 0.55
SDCBP-209ENST00000522243 MEAF6Q9HAF1 191 aa18.47■□□□□ 0.55
SDCBP-209ENST00000522243 TIGARQ9NQ88 270 aa18.47■□□□□ 0.55
SDCBP-209ENST00000522243 EXD2Q9NVH0 621 aa18.47■□□□□ 0.55
SDCBP-209ENST00000522243 BEX4Q9NWD9 120 aaPredicted RBP18.47■□□□□ 0.55
SDCBP-209ENST00000522243 IGHV3-15A0A0B4J1V0 119 aa18.46■□□□□ 0.55
SDCBP-209ENST00000522243 GJE1A6NN92 205 aa18.46■□□□□ 0.55
SDCBP-209ENST00000522243 C9JVG2 144 aa18.46■□□□□ 0.55
SDCBP-209ENST00000522243 CSTAP01040 98 aa18.46■□□□□ 0.55
SDCBP-209ENST00000522243 C1QCP02747 245 aa18.46■□□□□ 0.55
SDCBP-209ENST00000522243 NID1P14543 1247 aa18.46■□□□□ 0.55
SDCBP-209ENST00000522243 LOXP28300 417 aaPredicted RBP18.46■□□□□ 0.55
SDCBP-209ENST00000522243 NKX6-1P78426 367 aaPredicted RBP18.46■□□□□ 0.55
SDCBP-209ENST00000522243 CASP8Q14790 479 aa18.46■□□□□ 0.55
SDCBP-209ENST00000522243 FAM174BQ3ZCQ3 159 aa18.46■□□□□ 0.55
SDCBP-209ENST00000522243 TMEM201Q5SNT2 666 aa18.46■□□□□ 0.55
SDCBP-209ENST00000522243 HEPHL1Q6MZM0 1159 aa18.46■□□□□ 0.55
SDCBP-209ENST00000522243 BEND4Q6ZU67 534 aa18.46■□□□□ 0.55
SDCBP-209ENST00000522243 FCRLAQ7L513 359 aa18.46■□□□□ 0.55
SDCBP-209ENST00000522243 HMGN2P46Q86SG4 172 aa18.46■□□□□ 0.55
SDCBP-209ENST00000522243 STK32CQ86UX6 486 aa18.46■□□□□ 0.55
SDCBP-209ENST00000522243 CXorf67Q86X51 503 aaPredicted RBP18.46■□□□□ 0.55
SDCBP-209ENST00000522243 TUSC5Q8IXB3 177 aa18.46■□□□□ 0.55
SDCBP-209ENST00000522243 VPS37AQ8NEZ2 397 aa18.46■□□□□ 0.55
SDCBP-209ENST00000522243 MGARPQ8TDB4 240 aa18.46■□□□□ 0.55
SDCBP-209ENST00000522243 TEX37Q96LM6 180 aa18.46■□□□□ 0.55
SDCBP-209ENST00000522243 ZNF350Q9GZX5 532 aa18.46■□□□□ 0.55
SDCBP-209ENST00000522243 LAT2Q9GZY6 243 aa18.46■□□□□ 0.55
SDCBP-209ENST00000522243 ITPR3Q14573 2671 aa18.45■□□□□ 0.54
SDCBP-209ENST00000522243 SDHDO14521 159 aa18.45■□□□□ 0.54
SDCBP-209ENST00000522243 ALDOCP09972 364 aaKnown RBP18.45■□□□□ 0.54
SDCBP-209ENST00000522243 PABPC4LP0CB38 370 aaKnown RBP18.45■□□□□ 0.54
SDCBP-209ENST00000522243 UBTFL6P0CB48 400 aaPredicted RBP18.45■□□□□ 0.54
SDCBP-209ENST00000522243 ENPP1P22413 925 aa18.45■□□□□ 0.54
SDCBP-209ENST00000522243 HOXC12P31275 282 aa18.45■□□□□ 0.54
SDCBP-209ENST00000522243 S100A3P33764 101 aa18.45■□□□□ 0.54
SDCBP-209ENST00000522243 WDR4P57081 412 aaKnown RBP18.45■□□□□ 0.54
SDCBP-209ENST00000522243 UFM1P61960 85 aa18.45■□□□□ 0.54
SDCBP-209ENST00000522243 SELENBP1Q13228 472 aa18.45■□□□□ 0.54
SDCBP-209ENST00000522243 SKP2Q13309 424 aa18.45■□□□□ 0.54
SDCBP-209ENST00000522243 MAPK14Q16539 360 aa18.45■□□□□ 0.54
SDCBP-209ENST00000522243 ACKR1Q16570 336 aa18.45■□□□□ 0.54
SDCBP-209ENST00000522243 TIGD2Q4W5G0 525 aa18.45■□□□□ 0.54
SDCBP-209ENST00000522243 SLC25A53Q5H9E4 307 aa18.45■□□□□ 0.54
SDCBP-209ENST00000522243 ATAD3BQ5T9A4 648 aa18.45■□□□□ 0.54
SDCBP-209ENST00000522243 SAXO2Q658L1 398 aa18.45■□□□□ 0.54
SDCBP-209ENST00000522243 ALKBH2Q6NS38 261 aa18.45■□□□□ 0.54
SDCBP-209ENST00000522243 CROCCP2Q86T23 111 aa18.45■□□□□ 0.54
SDCBP-209ENST00000522243 WFDC8Q8IUA0 241 aa18.45■□□□□ 0.54
SDCBP-209ENST00000522243 KRTAP1-3Q8IUG1 177 aa18.45■□□□□ 0.54
SDCBP-209ENST00000522243 KIRREL3Q8IZU9 778 aa18.45■□□□□ 0.54
SDCBP-209ENST00000522243 MIPOL1Q8TD10 442 aa18.45■□□□□ 0.54
SDCBP-209ENST00000522243 SLC35A5Q9BS91 424 aa18.45■□□□□ 0.54
SDCBP-209ENST00000522243 DLL4Q9NR61 685 aa18.45■□□□□ 0.54
SDCBP-209ENST00000522243 MARCOQ9UEW3 520 aaPredicted RBP18.45■□□□□ 0.54
SDCBP-209ENST00000522243 GOLGA8QA0A0J9YX86 632 aa18.44■□□□□ 0.54
SDCBP-209ENST00000522243 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.44■□□□□ 0.54
SDCBP-209ENST00000522243 GOLGA8OA6NCC3 632 aa18.44■□□□□ 0.54
SDCBP-209ENST00000522243 E9PBE3 544 aa18.44■□□□□ 0.54
SDCBP-209ENST00000522243 GOLGA8NF8WBI6 632 aa18.44■□□□□ 0.54
SDCBP-209ENST00000522243 KLF4O43474 513 aa18.44■□□□□ 0.54
SDCBP-209ENST00000522243 PRKD3O94806 890 aa18.44■□□□□ 0.54
SDCBP-209ENST00000522243 KITP10721 976 aa18.44■□□□□ 0.54
SDCBP-209ENST00000522243 SLC7A1P30825 629 aa18.44■□□□□ 0.54
SDCBP-209ENST00000522243 CHI3L1P36222 383 aaPredicted RBP18.44■□□□□ 0.54
SDCBP-209ENST00000522243 CLNS1AP54105 237 aaKnown RBP18.44■□□□□ 0.54
SDCBP-209ENST00000522243 FUT5Q11128 374 aa18.44■□□□□ 0.54
SDCBP-209ENST00000522243 RNPS1Q15287 305 aaKnown RBP18.44■□□□□ 0.54
SDCBP-209ENST00000522243 TSC22D1Q15714 1073 aa18.44■□□□□ 0.54
SDCBP-209ENST00000522243 TYW3Q6IPR3 259 aaKnown RBP18.44■□□□□ 0.54
SDCBP-209ENST00000522243 ROPN1LQ96C74 230 aa18.44■□□□□ 0.54
SDCBP-209ENST00000522243 ACTR6Q9GZN1 396 aa18.44■□□□□ 0.54
SDCBP-209ENST00000522243 WDR55Q9H6Y2 383 aaPredicted RBP18.44■□□□□ 0.54
SDCBP-209ENST00000522243 FANCFQ9NPI8 374 aa18.44■□□□□ 0.54
SDCBP-209ENST00000522243 KLHL13Q9P2N7 655 aa18.44■□□□□ 0.54
SDCBP-209ENST00000522243 WDR45Q9Y484 360 aa18.44■□□□□ 0.54
SDCBP-209ENST00000522243 RAI1Q7Z5J4 1906 aaPredicted RBP18.43■□□□□ 0.54
SDCBP-209ENST00000522243 TMEM120BA0PK00 339 aa18.43■□□□□ 0.54
SDCBP-209ENST00000522243 BCAS1O75363 584 aaPredicted RBP18.43■□□□□ 0.54
SDCBP-209ENST00000522243 H6PDO95479 791 aa18.43■□□□□ 0.54
SDCBP-209ENST00000522243 PPP3CBP16298 524 aa18.43■□□□□ 0.54
SDCBP-209ENST00000522243 IL12AP29459 219 aa18.43■□□□□ 0.54
SDCBP-209ENST00000522243 SESN3P58005 492 aa18.43■□□□□ 0.54
SDCBP-209ENST00000522243 DPY19L1Q2PZI1 675 aa18.43■□□□□ 0.54
SDCBP-209ENST00000522243 GPAT3Q53EU6 434 aa18.43■□□□□ 0.54
SDCBP-209ENST00000522243 OGFOD2Q6N063 350 aa18.43■□□□□ 0.54
SDCBP-209ENST00000522243 TFAP2EQ6VUC0 442 aa18.43■□□□□ 0.54
SDCBP-209ENST00000522243 LRRC34Q8IZ02 419 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms