RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 LIMS1P48059 325 aa19.5■□□□□ 0.71
R3HCC1-208ENST00000522012 CBFBQ13951 182 aa19.5■□□□□ 0.71
R3HCC1-208ENST00000522012 DGCR6Q14129 220 aa19.5■□□□□ 0.71
R3HCC1-208ENST00000522012 DCST1Q5T197 706 aa19.5■□□□□ 0.71
R3HCC1-208ENST00000522012 SPINK14Q6IE38 97 aa19.5■□□□□ 0.71
R3HCC1-208ENST00000522012 ZNF613Q6PF04 617 aa19.5■□□□□ 0.71
R3HCC1-208ENST00000522012 LSMEM1Q8N8F7 131 aa19.5■□□□□ 0.71
R3HCC1-208ENST00000522012 NRBF2Q96F24 287 aa19.5■□□□□ 0.71
R3HCC1-208ENST00000522012 KLHDC3Q9BQ90 382 aa19.5■□□□□ 0.71
R3HCC1-208ENST00000522012 ZNF552Q9H707 407 aaPredicted RBP19.5■□□□□ 0.71
R3HCC1-208ENST00000522012 CPNE5Q9HCH3 593 aa19.5■□□□□ 0.71
R3HCC1-208ENST00000522012 MAN2C1Q9NTJ4 1040 aa19.5■□□□□ 0.71
R3HCC1-208ENST00000522012 SACM1LQ9NTJ5 587 aa19.5■□□□□ 0.71
R3HCC1-208ENST00000522012 MED11Q9P086 117 aa19.5■□□□□ 0.71
R3HCC1-208ENST00000522012 MAP1BP46821 2468 aaKnown RBP19.49■□□□□ 0.71
R3HCC1-208ENST00000522012 CCNB2O95067 398 aa19.49■□□□□ 0.71
R3HCC1-208ENST00000522012 PGCP20142 388 aa19.49■□□□□ 0.71
R3HCC1-208ENST00000522012 ELAVL4P26378 380 aaKnown RBP19.49■□□□□ 0.71
R3HCC1-208ENST00000522012 MFAP5Q13361 173 aa19.49■□□□□ 0.71
R3HCC1-208ENST00000522012 GK3PQ14409 553 aa19.49■□□□□ 0.71
R3HCC1-208ENST00000522012 MICAQ29983 383 aa19.49■□□□□ 0.71
R3HCC1-208ENST00000522012 BROXQ5VW32 411 aa19.49■□□□□ 0.71
R3HCC1-208ENST00000522012 PODNL1Q6PEZ8 512 aa19.49■□□□□ 0.71
R3HCC1-208ENST00000522012 ZNF227Q86WZ6 799 aa19.49■□□□□ 0.71
R3HCC1-208ENST00000522012 PSD4Q8NDX1 1056 aa19.49■□□□□ 0.71
R3HCC1-208ENST00000522012 FDCSPQ8NFU4 85 aa19.49■□□□□ 0.71
R3HCC1-208ENST00000522012 GIPC3Q8TF64 312 aa19.49■□□□□ 0.71
R3HCC1-208ENST00000522012 VCXQ9H320 206 aa19.49■□□□□ 0.71
R3HCC1-208ENST00000522012 HHATLQ9HCP6 504 aa19.49■□□□□ 0.71
R3HCC1-208ENST00000522012 TIMMDC1Q9NPL8 285 aa19.49■□□□□ 0.71
R3HCC1-208ENST00000522012 SELENONQ9NZV5 590 aa19.49■□□□□ 0.71
R3HCC1-208ENST00000522012 A0A0B4J2E0 115 aa19.48■□□□□ 0.71
R3HCC1-208ENST00000522012 A0A1B0GX12 115 aa19.48■□□□□ 0.71
R3HCC1-208ENST00000522012 ANKRD33BA6NCL7 494 aa19.48■□□□□ 0.71
R3HCC1-208ENST00000522012 EI24O14681 340 aa19.48■□□□□ 0.71
R3HCC1-208ENST00000522012 CDC40O60508 579 aaKnown RBP eCLIP19.48■□□□□ 0.71
R3HCC1-208ENST00000522012 RASAL1O95294 804 aa19.48■□□□□ 0.71
R3HCC1-208ENST00000522012 THRBP10828 461 aa19.48■□□□□ 0.71
R3HCC1-208ENST00000522012 OR1C1Q15619 314 aa19.48■□□□□ 0.71
R3HCC1-208ENST00000522012 INPP5JQ15735 1006 aaPredicted RBP19.48■□□□□ 0.71
R3HCC1-208ENST00000522012 WBP2NLQ6ICG8 309 aa19.48■□□□□ 0.71
R3HCC1-208ENST00000522012 PPP4R4Q6NUP7 873 aa19.48■□□□□ 0.71
R3HCC1-208ENST00000522012 PACS2Q86VP3 889 aa19.48■□□□□ 0.71
R3HCC1-208ENST00000522012 NKAIN4Q8IVV8 208 aa19.48■□□□□ 0.71
R3HCC1-208ENST00000522012 APLFQ8IW19 511 aaPredicted RBP19.48■□□□□ 0.71
R3HCC1-208ENST00000522012 SLC7A13Q8TCU3 470 aa19.48■□□□□ 0.71
R3HCC1-208ENST00000522012 MAGEE2Q8TD90 523 aaPredicted RBP19.48■□□□□ 0.71
R3HCC1-208ENST00000522012 SLC38A4Q969I6 547 aa19.48■□□□□ 0.71
R3HCC1-208ENST00000522012 SIGLEC12Q96PQ1 595 aa19.48■□□□□ 0.71
R3HCC1-208ENST00000522012 DSN1Q9H410 356 aa19.48■□□□□ 0.71
R3HCC1-208ENST00000522012 ANKRD19PQ9H560 264 aa19.48■□□□□ 0.71
R3HCC1-208ENST00000522012 SMURF2Q9HAU4 748 aa19.48■□□□□ 0.71
R3HCC1-208ENST00000522012 PROK2Q9HC23 129 aa19.48■□□□□ 0.71
R3HCC1-208ENST00000522012 RAXQ9Y2V3 346 aa19.48■□□□□ 0.71
R3HCC1-208ENST00000522012 FAAHO00519 579 aa19.47■□□□□ 0.71
R3HCC1-208ENST00000522012 GNB5O14775 395 aa19.47■□□□□ 0.71
R3HCC1-208ENST00000522012 SNX4O95219 450 aa19.47■□□□□ 0.71
R3HCC1-208ENST00000522012 NTN1O95631 604 aa19.47■□□□□ 0.71
R3HCC1-208ENST00000522012 ZNF26P17031 533 aaPredicted RBP19.47■□□□□ 0.71
R3HCC1-208ENST00000522012 MSX1P28360 303 aa19.47■□□□□ 0.71
R3HCC1-208ENST00000522012 MASP1P48740 699 aa19.47■□□□□ 0.71
R3HCC1-208ENST00000522012 SEC23BQ15437 767 aa19.47■□□□□ 0.71
R3HCC1-208ENST00000522012 TOMM34Q15785 309 aaPredicted RBP19.47■□□□□ 0.71
R3HCC1-208ENST00000522012 ALG10BQ5I7T1 473 aa19.47■□□□□ 0.71
R3HCC1-208ENST00000522012 ULK3Q6PHR2 472 aa19.47■□□□□ 0.71
R3HCC1-208ENST00000522012 LRRC69Q6ZNQ3 347 aa19.47■□□□□ 0.71
R3HCC1-208ENST00000522012 OR10G2Q8NGC3 310 aa19.47■□□□□ 0.71
R3HCC1-208ENST00000522012 GPR119Q8TDV5 335 aa19.47■□□□□ 0.71
R3HCC1-208ENST00000522012 JSRP1Q96MG2 331 aaPredicted RBP19.47■□□□□ 0.71
R3HCC1-208ENST00000522012 FRMD6Q96NE9 622 aa19.47■□□□□ 0.71
R3HCC1-208ENST00000522012 FUZQ9BT04 418 aa19.47■□□□□ 0.71
R3HCC1-208ENST00000522012 HRH3Q9Y5N1 445 aa19.47■□□□□ 0.71
R3HCC1-208ENST00000522012 CHD8Q9HCK8 2581 aa19.47■□□□□ 0.71
R3HCC1-208ENST00000522012 IGLV3-32A0A0A0MS00 114 aa19.46■□□□□ 0.71
R3HCC1-208ENST00000522012 SH3PXD2BA1X283 911 aa19.46■□□□□ 0.71
R3HCC1-208ENST00000522012 ANKUB1A6NFN9 424 aa19.46■□□□□ 0.71
R3HCC1-208ENST00000522012 NEURL1O76050 574 aa19.46■□□□□ 0.71
R3HCC1-208ENST00000522012 LYPD3O95274 346 aa19.46■□□□□ 0.71
R3HCC1-208ENST00000522012 SUMO3P55854 103 aaPredicted RBP19.46■□□□□ 0.71
R3HCC1-208ENST00000522012 TLE3Q04726 772 aa19.46■□□□□ 0.71
R3HCC1-208ENST00000522012 KCNAB2Q13303 367 aa19.46■□□□□ 0.71
R3HCC1-208ENST00000522012 DAG1Q14118 895 aa19.46■□□□□ 0.71
R3HCC1-208ENST00000522012 QPRTQ15274 297 aa19.46■□□□□ 0.71
R3HCC1-208ENST00000522012 ANKRD34AQ69YU3 496 aa19.46■□□□□ 0.71
R3HCC1-208ENST00000522012 IZUMO2Q6UXV1 221 aa19.46■□□□□ 0.71
R3HCC1-208ENST00000522012 ZNF730Q6ZMV8 503 aa19.46■□□□□ 0.71
R3HCC1-208ENST00000522012 PACRGLQ8N7B6 248 aa19.46■□□□□ 0.71
R3HCC1-208ENST00000522012 WDSUB1Q8N9V3 476 aa19.46■□□□□ 0.71
R3HCC1-208ENST00000522012 ATG16L2Q8NAA4 619 aa19.46■□□□□ 0.71
R3HCC1-208ENST00000522012 OR4K17Q8NGC6 315 aa19.46■□□□□ 0.71
R3HCC1-208ENST00000522012 TMEM255BQ8WV15 326 aa19.46■□□□□ 0.71
R3HCC1-208ENST00000522012 DNAJA4Q8WW22 397 aaPredicted RBP19.46■□□□□ 0.71
R3HCC1-208ENST00000522012 ZNF524Q96C55 264 aa19.46■□□□□ 0.71
R3HCC1-208ENST00000522012 C8orf4Q9NR00 106 aa19.46■□□□□ 0.71
R3HCC1-208ENST00000522012 KIF17Q9P2E2 1029 aa19.46■□□□□ 0.71
R3HCC1-208ENST00000522012 ZFHX4Q86UP3 3567 aa19.46■□□□□ 0.71
R3HCC1-208ENST00000522012 OR5H15A6NDH6 313 aa19.46■□□□□ 0.71
R3HCC1-208ENST00000522012 B4DXG7 233 aa19.46■□□□□ 0.71
R3HCC1-208ENST00000522012 CDK2AP1O14519 115 aa19.46■□□□□ 0.71
R3HCC1-208ENST00000522012 CHP2O43745 196 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms