RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 RNF139Q8WU17 664 aa4.11□□□□□ -1.75
HMGB1P46-201ENST00000520062 ARNTL2Q8WYA1 636 aa4.11□□□□□ -1.75
HMGB1P46-201ENST00000520062 MRPS31Q92665 395 aaKnown RBP4.11□□□□□ -1.75
HMGB1P46-201ENST00000520062 EFHD2Q96C19 240 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P46-201ENST00000520062 SPATA16Q9BXB7 569 aa4.11□□□□□ -1.75
HMGB1P46-201ENST00000520062 KRTAP9-8Q9BYQ0 159 aa4.11□□□□□ -1.75
HMGB1P46-201ENST00000520062 PKIBQ9C010 78 aa4.11□□□□□ -1.75
HMGB1P46-201ENST00000520062 NAT10Q9H0A0 1025 aaKnown RBP4.11□□□□□ -1.75
HMGB1P46-201ENST00000520062 RHBGQ9H310 441 aa4.11□□□□□ -1.75
HMGB1P46-201ENST00000520062 MCCC2Q9HCC0 563 aa4.11□□□□□ -1.75
HMGB1P46-201ENST00000520062 NANSQ9NR45 359 aa4.11□□□□□ -1.75
HMGB1P46-201ENST00000520062 SPRR3Q9UBC9 169 aa4.11□□□□□ -1.75
HMGB1P46-201ENST00000520062 ADAM28Q9UKQ2 775 aa4.11□□□□□ -1.75
HMGB1P46-201ENST00000520062 LOC100131303A0A0U1RQF7 123 aa4.1□□□□□ -1.75
HMGB1P46-201ENST00000520062 HELTA6NFD8 242 aa4.1□□□□□ -1.75
HMGB1P46-201ENST00000520062 CCT8L1PA6NM43 557 aa4.1□□□□□ -1.75
HMGB1P46-201ENST00000520062 K7ENP7 123 aa4.1□□□□□ -1.75
HMGB1P46-201ENST00000520062 PRKAB2O43741 272 aa4.1□□□□□ -1.75
HMGB1P46-201ENST00000520062 TSPAN12O95859 305 aa4.1□□□□□ -1.75
HMGB1P46-201ENST00000520062 SHC1P29353 583 aa4.1□□□□□ -1.75
HMGB1P46-201ENST00000520062 YWHABP31946 246 aaKnown RBP4.1□□□□□ -1.75
HMGB1P46-201ENST00000520062 RPL13AP40429 203 aaKnown RBP4.1□□□□□ -1.75
HMGB1P46-201ENST00000520062 MAGEA8P43361 318 aa4.1□□□□□ -1.75
HMGB1P46-201ENST00000520062 LIM2P55344 173 aa4.1□□□□□ -1.75
HMGB1P46-201ENST00000520062 RPL32P62910 135 aaKnown RBP4.1□□□□□ -1.75
HMGB1P46-201ENST00000520062 RUNX3Q13761 415 aa4.1□□□□□ -1.75
HMGB1P46-201ENST00000520062 IDI1Q13907 227 aa4.1□□□□□ -1.75
HMGB1P46-201ENST00000520062 GLYR1Q49A26 553 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P46-201ENST00000520062 HIGD2BQ4VC39 106 aa4.1□□□□□ -1.75
HMGB1P46-201ENST00000520062 LIPNQ5VXI9 398 aa4.1□□□□□ -1.75
HMGB1P46-201ENST00000520062 ZNF772Q68DY9 489 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P46-201ENST00000520062 C2orf66Q6UXQ4 117 aa4.1□□□□□ -1.75
HMGB1P46-201ENST00000520062 NANOGNBQ7Z5D8 188 aa4.1□□□□□ -1.75
HMGB1P46-201ENST00000520062 MFSD9Q8NBP5 474 aa4.1□□□□□ -1.75
HMGB1P46-201ENST00000520062 AGAP11Q8TF27 550 aa4.1□□□□□ -1.75
HMGB1P46-201ENST00000520062 CELF6Q96J87 481 aaKnown RBP4.1□□□□□ -1.75
HMGB1P46-201ENST00000520062 PLIN2Q99541 437 aa4.1□□□□□ -1.75
HMGB1P46-201ENST00000520062 MCHR1Q99705 422 aa4.1□□□□□ -1.75
HMGB1P46-201ENST00000520062 APOL2Q9BQE5 337 aa4.1□□□□□ -1.75
HMGB1P46-201ENST00000520062 ZNF670Q9BS34 389 aa4.1□□□□□ -1.75
HMGB1P46-201ENST00000520062 CAB39LQ9H9S4 337 aa4.1□□□□□ -1.75
HMGB1P46-201ENST00000520062 B3GNT2Q9NY97 397 aa4.1□□□□□ -1.75
HMGB1P46-201ENST00000520062 PAK5Q9P286 719 aa4.1□□□□□ -1.75
HMGB1P46-201ENST00000520062 RIMS3Q9UJD0 308 aa4.1□□□□□ -1.75
HMGB1P46-201ENST00000520062 CA5BQ9Y2D0 317 aa4.1□□□□□ -1.75
HMGB1P46-201ENST00000520062 MEMO1Q9Y316 297 aa4.1□□□□□ -1.75
HMGB1P46-201ENST00000520062 OR52A4PA6NMU1 304 aa4.09□□□□□ -1.75
HMGB1P46-201ENST00000520062 LATO43561 262 aa4.09□□□□□ -1.75
HMGB1P46-201ENST00000520062 TIMM8AO60220 97 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P46-201ENST00000520062 NOL4O94818 638 aa4.09□□□□□ -1.75
HMGB1P46-201ENST00000520062 DUSP14O95147 198 aaKnown RBP4.09□□□□□ -1.75
HMGB1P46-201ENST00000520062 PGK1P00558 417 aa4.09□□□□□ -1.75
HMGB1P46-201ENST00000520062 SERPINA3P01011 423 aa4.09□□□□□ -1.75
HMGB1P46-201ENST00000520062 PGAM2P15259 253 aa4.09□□□□□ -1.75
HMGB1P46-201ENST00000520062 NCF2P19878 526 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P46-201ENST00000520062 MX1P20591 662 aa4.09□□□□□ -1.75
HMGB1P46-201ENST00000520062 EPS15P42566 896 aa4.09□□□□□ -1.75
HMGB1P46-201ENST00000520062 MRPS11P82912 194 aaKnown RBP4.09□□□□□ -1.75
HMGB1P46-201ENST00000520062 ZFP36L1Q07352 338 aaKnown RBP4.09□□□□□ -1.75
HMGB1P46-201ENST00000520062 QRICH1Q2TAL8 776 aa4.09□□□□□ -1.75
HMGB1P46-201ENST00000520062 C1orf220Q5T0J3 134 aa4.09□□□□□ -1.75
HMGB1P46-201ENST00000520062 SLC35F2Q8IXU6 374 aa4.09□□□□□ -1.75
HMGB1P46-201ENST00000520062 NECAB1Q8N987 351 aa4.09□□□□□ -1.75
HMGB1P46-201ENST00000520062 FAM83FQ8NEG4 500 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P46-201ENST00000520062 OR4D9Q8NGE8 314 aa4.09□□□□□ -1.75
HMGB1P46-201ENST00000520062 OR2L2Q8NH16 312 aa4.09□□□□□ -1.75
HMGB1P46-201ENST00000520062 CCDC26Q8TAB7 109 aa4.09□□□□□ -1.75
HMGB1P46-201ENST00000520062 PSMG2Q969U7 264 aa4.09□□□□□ -1.75
HMGB1P46-201ENST00000520062 OR5M11Q96RB7 305 aa4.09□□□□□ -1.75
HMGB1P46-201ENST00000520062 RANBP9Q96S59 729 aa4.09□□□□□ -1.75
HMGB1P46-201ENST00000520062 SEC14L3Q9UDX4 400 aa4.09□□□□□ -1.75
HMGB1P46-201ENST00000520062 IGHV3-35A0A0C4DH35 117 aa4.08□□□□□ -1.76
HMGB1P46-201ENST00000520062 E7ESA3 106 aa4.08□□□□□ -1.76
HMGB1P46-201ENST00000520062 FCN1O00602 326 aa4.08□□□□□ -1.76
HMGB1P46-201ENST00000520062 PHF1O43189 567 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P46-201ENST00000520062 GPAA1O43292 621 aa4.08□□□□□ -1.76
HMGB1P46-201ENST00000520062 CXCL13O43927 109 aa4.08□□□□□ -1.76
HMGB1P46-201ENST00000520062 PRKYO43930 277 aa4.08□□□□□ -1.76
HMGB1P46-201ENST00000520062 GPX5O75715 221 aa4.08□□□□□ -1.76
HMGB1P46-201ENST00000520062 STSP08842 583 aa4.08□□□□□ -1.76
HMGB1P46-201ENST00000520062 ALOX5P09917 674 aa4.08□□□□□ -1.76
HMGB1P46-201ENST00000520062 SLC2A3P11169 496 aa4.08□□□□□ -1.76
HMGB1P46-201ENST00000520062 UGT1A5P35504 534 aa4.08□□□□□ -1.76
HMGB1P46-201ENST00000520062 MAP3K8P41279 467 aa4.08□□□□□ -1.76
HMGB1P46-201ENST00000520062 RPL29P47914 159 aaKnown RBP4.08□□□□□ -1.76
HMGB1P46-201ENST00000520062 STARP49675 285 aa4.08□□□□□ -1.76
HMGB1P46-201ENST00000520062 PRKXP51817 358 aa4.08□□□□□ -1.76
HMGB1P46-201ENST00000520062 IST1P53990 364 aa4.08□□□□□ -1.76
HMGB1P46-201ENST00000520062 SEC61GP60059 68 aa4.08□□□□□ -1.76
HMGB1P46-201ENST00000520062 CD47Q08722 323 aa4.08□□□□□ -1.76
HMGB1P46-201ENST00000520062 KLRB1Q12918 225 aa4.08□□□□□ -1.76
HMGB1P46-201ENST00000520062 SERTAD2Q14140 314 aa4.08□□□□□ -1.76
HMGB1P46-201ENST00000520062 SSX2Q16385 188 aa4.08□□□□□ -1.76
HMGB1P46-201ENST00000520062 KCTD21Q4G0X4 260 aa4.08□□□□□ -1.76
HMGB1P46-201ENST00000520062 SLC22A6Q4U2R8 563 aa4.08□□□□□ -1.76
HMGB1P46-201ENST00000520062 CTSL3PQ5NE16 218 aa4.08□□□□□ -1.76
HMGB1P46-201ENST00000520062 PDZK1Q5T2W1 519 aa4.08□□□□□ -1.76
HMGB1P46-201ENST00000520062 RNLSQ5VYX0 342 aa4.08□□□□□ -1.76
HMGB1P46-201ENST00000520062 SLC22A10Q63ZE4 541 aa4.08□□□□□ -1.76
HMGB1P46-201ENST00000520062 TPGS2Q68CL5 300 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms