RNA–Protein interactions for RNA: ENST00000520057.1

IGHV3-62-201, Transcript of immunoglobulin heavy variable 3-62 (pseudogene), humanhuman

BASIC

Gene IGHV3-62, Length 340 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-62-201ENST00000520057 CARD18P57730 90 aa14.85□□□□□ -0.03
IGHV3-62-201ENST00000520057 SKP2Q13309 424 aa14.85□□□□□ -0.03
IGHV3-62-201ENST00000520057 LARS2Q15031 903 aaKnown RBP14.85□□□□□ -0.03
IGHV3-62-201ENST00000520057 TOMM34Q15785 309 aaPredicted RBP14.85□□□□□ -0.03
IGHV3-62-201ENST00000520057 PAGE3Q5JUK9 113 aa14.85□□□□□ -0.03
IGHV3-62-201ENST00000520057 POMZP3Q6PJE2 187 aa14.85□□□□□ -0.03
IGHV3-62-201ENST00000520057 GDF7Q7Z4P5 450 aa14.85□□□□□ -0.03
IGHV3-62-201ENST00000520057 ADGRE4PQ86SQ3 457 aa14.85□□□□□ -0.03
IGHV3-62-201ENST00000520057 CMIPQ8IY22 773 aa14.85□□□□□ -0.03
IGHV3-62-201ENST00000520057 OR52P1PQ8NH57 321 aa14.85□□□□□ -0.03
IGHV3-62-201ENST00000520057 OR10D3Q8NH80 312 aa14.85□□□□□ -0.03
IGHV3-62-201ENST00000520057 OR2V1Q8NHB1 315 aa14.85□□□□□ -0.03
IGHV3-62-201ENST00000520057 FNDC9Q8TBE3 224 aa14.85□□□□□ -0.03
IGHV3-62-201ENST00000520057 ST8SIA1Q92185 356 aa14.85□□□□□ -0.03
IGHV3-62-201ENST00000520057 FIG4Q92562 907 aa14.85□□□□□ -0.03
IGHV3-62-201ENST00000520057 ZG16BQ96DA0 208 aa14.85□□□□□ -0.03
IGHV3-62-201ENST00000520057 ZNF845Q96IR2 970 aaPredicted RBP14.85□□□□□ -0.03
IGHV3-62-201ENST00000520057 SLC38A1Q9H2H9 487 aa14.85□□□□□ -0.03
IGHV3-62-201ENST00000520057 SPIN1Q9Y657 262 aaPredicted RBP14.85□□□□□ -0.03
IGHV3-62-201ENST00000520057 ASH1LQ9NR48 2969 aaKnown RBP14.84□□□□□ -0.03
IGHV3-62-201ENST00000520057 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.84□□□□□ -0.03
IGHV3-62-201ENST00000520057 A0A0G2JPF8 293 aa14.84□□□□□ -0.03
IGHV3-62-201ENST00000520057 PRAMEF27A3QJZ7 478 aa14.84□□□□□ -0.03
IGHV3-62-201ENST00000520057 AGAP5A6NIR3 686 aa14.84□□□□□ -0.03
IGHV3-62-201ENST00000520057 HNRNPCL2B2RXH8 293 aa14.84□□□□□ -0.03
IGHV3-62-201ENST00000520057 HNRNPCL3B7ZW38 293 aa14.84□□□□□ -0.03
IGHV3-62-201ENST00000520057 CXCL13O43927 109 aa14.84□□□□□ -0.03
IGHV3-62-201ENST00000520057 HNRNPCL1O60812 293 aaKnown RBP14.84□□□□□ -0.03
IGHV3-62-201ENST00000520057 SMNDC1O75940 238 aaKnown RBP eCLIP14.84□□□□□ -0.03
IGHV3-62-201ENST00000520057 HNRNPCL4P0DMR1 293 aa14.84□□□□□ -0.03
IGHV3-62-201ENST00000520057 PGM1P36871 562 aa14.84□□□□□ -0.03
IGHV3-62-201ENST00000520057 PEX19P40855 299 aa14.84□□□□□ -0.03
IGHV3-62-201ENST00000520057 MERTKQ12866 999 aa14.84□□□□□ -0.03
IGHV3-62-201ENST00000520057 MYBPHQ13203 477 aa14.84□□□□□ -0.03
IGHV3-62-201ENST00000520057 SELENBP1Q13228 472 aa14.84□□□□□ -0.03
IGHV3-62-201ENST00000520057 TMEM176BQ3YBM2 270 aaPredicted RBP14.84□□□□□ -0.03
IGHV3-62-201ENST00000520057 MMEL1Q495T6 779 aa14.84□□□□□ -0.03
IGHV3-62-201ENST00000520057 LIN52Q52LA3 116 aa14.84□□□□□ -0.03
IGHV3-62-201ENST00000520057 LRIF1Q5T3J3 769 aa14.84□□□□□ -0.03
IGHV3-62-201ENST00000520057 GCNT6Q5T4J0 391 aa14.84□□□□□ -0.03
IGHV3-62-201ENST00000520057 GTF2IRD2BQ6EKJ0 949 aa14.84□□□□□ -0.03
IGHV3-62-201ENST00000520057 LUZP2Q86TE4 346 aa14.84□□□□□ -0.03
IGHV3-62-201ENST00000520057 GTF2IRD2Q86UP8 949 aa14.84□□□□□ -0.03
IGHV3-62-201ENST00000520057 POC1BQ8TC44 478 aa14.84□□□□□ -0.03
IGHV3-62-201ENST00000520057 SLC38A5Q8WUX1 472 aa14.84□□□□□ -0.03
IGHV3-62-201ENST00000520057 OSTF1Q92882 214 aa14.84□□□□□ -0.03
IGHV3-62-201ENST00000520057 TMEM19Q96HH6 336 aa14.84□□□□□ -0.03
IGHV3-62-201ENST00000520057 PIGMQ9H3S5 423 aa14.84□□□□□ -0.03
IGHV3-62-201ENST00000520057 FOXD3Q9UJU5 478 aaPredicted RBP14.84□□□□□ -0.03
IGHV3-62-201ENST00000520057 USP9YO00507 2555 aaPredicted RBP14.84□□□□□ -0.03
IGHV3-62-201ENST00000520057 SPTBN1Q01082 2364 aaKnown RBP14.84□□□□□ -0.03
IGHV3-62-201ENST00000520057 COL12A1Q99715 3063 aa14.83□□□□□ -0.04
IGHV3-62-201ENST00000520057 CRHP06850 196 aa14.83□□□□□ -0.04
IGHV3-62-201ENST00000520057 TFPTP0C1Z6 253 aa14.83□□□□□ -0.04
IGHV3-62-201ENST00000520057 PABPC4LP0CB38 370 aaKnown RBP14.83□□□□□ -0.04
IGHV3-62-201ENST00000520057 MVDP53602 400 aa14.83□□□□□ -0.04
IGHV3-62-201ENST00000520057 CTBP2P56545 445 aa14.83□□□□□ -0.04
IGHV3-62-201ENST00000520057 SESN3P58005 492 aa14.83□□□□□ -0.04
IGHV3-62-201ENST00000520057 SIRPAP78324 504 aa14.83□□□□□ -0.04
IGHV3-62-201ENST00000520057 FOXF2Q12947 444 aa14.83□□□□□ -0.04
IGHV3-62-201ENST00000520057 NFYCQ13952 458 aa14.83□□□□□ -0.04
IGHV3-62-201ENST00000520057 MAPRE2Q15555 327 aa14.83□□□□□ -0.04
IGHV3-62-201ENST00000520057 ZSWIM7Q19AV6 140 aa14.83□□□□□ -0.04
IGHV3-62-201ENST00000520057 C3orf33Q6P1S2 294 aa14.83□□□□□ -0.04
IGHV3-62-201ENST00000520057 DHDDSQ86SQ9 333 aa14.83□□□□□ -0.04
IGHV3-62-201ENST00000520057 GGNQ86UU5 652 aa14.83□□□□□ -0.04
IGHV3-62-201ENST00000520057 KIF18BQ86Y91 864 aa14.83□□□□□ -0.04
IGHV3-62-201ENST00000520057 ZNF440Q8IYI8 595 aa14.83□□□□□ -0.04
IGHV3-62-201ENST00000520057 RELL2Q8NC24 303 aaPredicted RBP14.83□□□□□ -0.04
IGHV3-62-201ENST00000520057 TSPEARQ8WU66 669 aa14.83□□□□□ -0.04
IGHV3-62-201ENST00000520057 RNASE6Q93091 150 aaKnown RBP14.83□□□□□ -0.04
IGHV3-62-201ENST00000520057 NPAS1Q99742 590 aa14.83□□□□□ -0.04
IGHV3-62-201ENST00000520057 TREX2Q9BQ50 279 aaPredicted RBP14.83□□□□□ -0.04
IGHV3-62-201ENST00000520057 KLHDC3Q9BQ90 382 aa14.83□□□□□ -0.04
IGHV3-62-201ENST00000520057 ENKD1Q9H0I2 346 aa14.83□□□□□ -0.04
IGHV3-62-201ENST00000520057 CCDC134Q9H6E4 229 aa14.83□□□□□ -0.04
IGHV3-62-201ENST00000520057 EXOSC3Q9NQT5 275 aaKnown RBP14.83□□□□□ -0.04
IGHV3-62-201ENST00000520057 VAPAQ9P0L0 249 aa14.83□□□□□ -0.04
IGHV3-62-201ENST00000520057 SLAMF8Q9P0V8 285 aa14.83□□□□□ -0.04
IGHV3-62-201ENST00000520057 PACSIN3Q9UKS6 424 aa14.83□□□□□ -0.04
IGHV3-62-201ENST00000520057 IFT52Q9Y366 437 aa14.83□□□□□ -0.04
IGHV3-62-201ENST00000520057 EMC9Q9Y3B6 208 aa14.83□□□□□ -0.04
IGHV3-62-201ENST00000520057 PTPN13Q12923 2485 aa14.83□□□□□ -0.04
IGHV3-62-201ENST00000520057 NUP214P35658 2090 aaPredicted RBP14.82□□□□□ -0.04
IGHV3-62-201ENST00000520057 A0A0J9YW62 118 aa14.82□□□□□ -0.04
IGHV3-62-201ENST00000520057 A0A1W2PNV4 684 aa14.82□□□□□ -0.04
IGHV3-62-201ENST00000520057 CFAP73A6NFT4 308 aa14.82□□□□□ -0.04
IGHV3-62-201ENST00000520057 CLDN24A6NM45 220 aa14.82□□□□□ -0.04
IGHV3-62-201ENST00000520057 SYT5O00445 386 aa14.82□□□□□ -0.04
IGHV3-62-201ENST00000520057 TFPIP10646 304 aa14.82□□□□□ -0.04
IGHV3-62-201ENST00000520057 NID1P14543 1247 aa14.82□□□□□ -0.04
IGHV3-62-201ENST00000520057 IL11P20809 199 aa14.82□□□□□ -0.04
IGHV3-62-201ENST00000520057 PSMA4P25789 261 aaKnown RBP14.82□□□□□ -0.04
IGHV3-62-201ENST00000520057 IDH2P48735 452 aaKnown RBP14.82□□□□□ -0.04
IGHV3-62-201ENST00000520057 COPZ1P61923 177 aa14.82□□□□□ -0.04
IGHV3-62-201ENST00000520057 TFF3Q07654 80 aa14.82□□□□□ -0.04
IGHV3-62-201ENST00000520057 ZNF311Q5JNZ3 666 aa14.82□□□□□ -0.04
IGHV3-62-201ENST00000520057 RPS26P11Q5JNZ5 115 aaPredicted RBP14.82□□□□□ -0.04
IGHV3-62-201ENST00000520057 MRPL2Q5T653 305 aaKnown RBP14.82□□□□□ -0.04
IGHV3-62-201ENST00000520057 AP1ARQ63HQ0 302 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms