RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 CCDC22O60826 627 aa10.38□□□□□ -0.75
SPIDR-212ENST00000519661 BCAS1O75363 584 aaPredicted RBP10.38□□□□□ -0.75
SPIDR-212ENST00000519661 PGM3O95394 542 aa10.38□□□□□ -0.75
SPIDR-212ENST00000519661 NUDT7P0C024 238 aa10.38□□□□□ -0.75
SPIDR-212ENST00000519661 FREM3P0C091 2139 aa10.38□□□□□ -0.75
SPIDR-212ENST00000519661 NPIPA8P0DM63 369 aa10.38□□□□□ -0.75
SPIDR-212ENST00000519661 NR2F1P10589 423 aa10.38□□□□□ -0.75
SPIDR-212ENST00000519661 PGCP20142 388 aa10.38□□□□□ -0.75
SPIDR-212ENST00000519661 PRKAR1BP31321 381 aa10.38□□□□□ -0.75
SPIDR-212ENST00000519661 CRATP43155 626 aa10.38□□□□□ -0.75
SPIDR-212ENST00000519661 CLK1P49759 484 aaKnown RBP10.38□□□□□ -0.75
SPIDR-212ENST00000519661 CASP9P55211 416 aa10.38□□□□□ -0.75
SPIDR-212ENST00000519661 PMPCAQ10713 525 aa10.38□□□□□ -0.75
SPIDR-212ENST00000519661 LIN52Q52LA3 116 aa10.38□□□□□ -0.75
SPIDR-212ENST00000519661 GPAT3Q53EU6 434 aa10.38□□□□□ -0.75
SPIDR-212ENST00000519661 ZNF585AQ6P3V2 769 aa10.38□□□□□ -0.75
SPIDR-212ENST00000519661 C3P1Q6ZMU1 363 aa10.38□□□□□ -0.75
SPIDR-212ENST00000519661 ESPNLQ6ZVH7 1005 aa10.38□□□□□ -0.75
SPIDR-212ENST00000519661 SPATA21Q7Z572 469 aa10.38□□□□□ -0.75
SPIDR-212ENST00000519661 CALHM3Q86XJ0 350 aa10.38□□□□□ -0.75
SPIDR-212ENST00000519661 PTOV1Q86YD1 416 aa10.38□□□□□ -0.75
SPIDR-212ENST00000519661 PEX5LQ8IYB4 626 aa10.38□□□□□ -0.75
SPIDR-212ENST00000519661 ANKS4BQ8N8V4 417 aa10.38□□□□□ -0.75
SPIDR-212ENST00000519661 RP9Q8TA86 221 aaKnown RBP10.38□□□□□ -0.75
SPIDR-212ENST00000519661 PNPT1Q8TCS8 783 aaKnown RBP10.38□□□□□ -0.75
SPIDR-212ENST00000519661 NPAS1Q99742 590 aa10.38□□□□□ -0.75
SPIDR-212ENST00000519661 GPATCH1Q9BRR8 931 aaKnown RBP10.38□□□□□ -0.75
SPIDR-212ENST00000519661 CCDC106Q9BWC9 280 aa10.38□□□□□ -0.75
SPIDR-212ENST00000519661 RSPO3Q9BXY4 272 aaPredicted RBP10.38□□□□□ -0.75
SPIDR-212ENST00000519661 RNF122Q9H9V4 155 aa10.38□□□□□ -0.75
SPIDR-212ENST00000519661 GP6Q9HCN6 339 aa10.38□□□□□ -0.75
SPIDR-212ENST00000519661 CHST11Q9NPF2 352 aa10.38□□□□□ -0.75
SPIDR-212ENST00000519661 COQ3Q9NZJ6 369 aa10.38□□□□□ -0.75
SPIDR-212ENST00000519661 Q9UFV3 132 aa10.38□□□□□ -0.75
SPIDR-212ENST00000519661 IFT52Q9Y366 437 aa10.38□□□□□ -0.75
SPIDR-212ENST00000519661 CAPN7Q9Y6W3 813 aa10.38□□□□□ -0.75
SPIDR-212ENST00000519661 NBPF19A0A087WUL8 3843 aa10.37□□□□□ -0.75
SPIDR-212ENST00000519661 TMEM247A6NEH6 219 aa10.37□□□□□ -0.75
SPIDR-212ENST00000519661 CLCA1A8K7I4 914 aa10.37□□□□□ -0.75
SPIDR-212ENST00000519661 EVPLLA8MZ36 301 aa10.37□□□□□ -0.75
SPIDR-212ENST00000519661 DNPH1O43598 174 aa10.37□□□□□ -0.75
SPIDR-212ENST00000519661 SHOX2O60902 331 aaPredicted RBP10.37□□□□□ -0.75
SPIDR-212ENST00000519661 BCHEP06276 602 aa10.37□□□□□ -0.75
SPIDR-212ENST00000519661 POU3F2P20265 443 aaPredicted RBP10.37□□□□□ -0.75
SPIDR-212ENST00000519661 APOBEC1P41238 236 aaKnown RBP10.37□□□□□ -0.75
SPIDR-212ENST00000519661 ACAA2P42765 397 aaKnown RBP10.37□□□□□ -0.75
SPIDR-212ENST00000519661 HTR3AP46098 478 aa10.37□□□□□ -0.75
SPIDR-212ENST00000519661 STARP49675 285 aa10.37□□□□□ -0.75
SPIDR-212ENST00000519661 SUCLG1P53597 346 aaKnown RBP10.37□□□□□ -0.75
SPIDR-212ENST00000519661 SEC24CP53992 1094 aa10.37□□□□□ -0.75
SPIDR-212ENST00000519661 CLDN20P56880 219 aa10.37□□□□□ -0.75
SPIDR-212ENST00000519661 FOXF1Q12946 379 aa10.37□□□□□ -0.75
SPIDR-212ENST00000519661 SELENBP1Q13228 472 aa10.37□□□□□ -0.75
SPIDR-212ENST00000519661 CYLC2Q14093 348 aaPredicted RBP10.37□□□□□ -0.75
SPIDR-212ENST00000519661 QPRTQ15274 297 aa10.37□□□□□ -0.75
SPIDR-212ENST00000519661 TOMM20Q15388 145 aa10.37□□□□□ -0.75
SPIDR-212ENST00000519661 TOMM34Q15785 309 aaPredicted RBP10.37□□□□□ -0.75
SPIDR-212ENST00000519661 GCNT6Q5T4J0 391 aa10.37□□□□□ -0.75
SPIDR-212ENST00000519661 MRPL2Q5T653 305 aaKnown RBP10.37□□□□□ -0.75
SPIDR-212ENST00000519661 REEP3Q6NUK4 255 aa10.37□□□□□ -0.75
SPIDR-212ENST00000519661 DHRS4L2Q6PKH6 230 aa10.37□□□□□ -0.75
SPIDR-212ENST00000519661 HACD2Q6Y1H2 254 aa10.37□□□□□ -0.75
SPIDR-212ENST00000519661 OLIG3Q7RTU3 272 aa10.37□□□□□ -0.75
SPIDR-212ENST00000519661 GRINAQ7Z429 371 aa10.37□□□□□ -0.75
SPIDR-212ENST00000519661 SLC30A8Q8IWU4 369 aa10.37□□□□□ -0.75
SPIDR-212ENST00000519661 MEIOBQ8N635 442 aa10.37□□□□□ -0.75
SPIDR-212ENST00000519661 GATSQ8NAP1 163 aa10.37□□□□□ -0.75
SPIDR-212ENST00000519661 NAXEQ8NCW5 288 aa10.37□□□□□ -0.75
SPIDR-212ENST00000519661 BHLHE22Q8NFJ8 381 aaPredicted RBP10.37□□□□□ -0.75
SPIDR-212ENST00000519661 SLC25A43Q8WUT9 341 aaPredicted RBP10.37□□□□□ -0.75
SPIDR-212ENST00000519661 WDR60Q8WVS4 1066 aa10.37□□□□□ -0.75
SPIDR-212ENST00000519661 TMEM234Q8WY98 164 aa10.37□□□□□ -0.75
SPIDR-212ENST00000519661 CNOT9Q92600 299 aaKnown RBP10.37□□□□□ -0.75
SPIDR-212ENST00000519661 LRRC58Q96CX6 371 aa10.37□□□□□ -0.75
SPIDR-212ENST00000519661 RNF145Q96MT1 663 aa10.37□□□□□ -0.75
SPIDR-212ENST00000519661 SH3GL1Q99961 368 aa10.37□□□□□ -0.75
SPIDR-212ENST00000519661 SPOCK3Q9BQ16 436 aa10.37□□□□□ -0.75
SPIDR-212ENST00000519661 SFXN3Q9BWM7 321 aa10.37□□□□□ -0.75
SPIDR-212ENST00000519661 ADAM19Q9H013 955 aa10.37□□□□□ -0.75
SPIDR-212ENST00000519661 QRSL1Q9H0R6 528 aaKnown RBP10.37□□□□□ -0.75
SPIDR-212ENST00000519661 SH3BGRL2Q9UJC5 107 aa10.37□□□□□ -0.75
SPIDR-212ENST00000519661 RPH3AQ9Y2J0 694 aaPredicted RBP10.37□□□□□ -0.75
SPIDR-212ENST00000519661 CACNA1CQ13936 2221 aa10.37□□□□□ -0.75
SPIDR-212ENST00000519661 MAST4O15021 2626 aa10.37□□□□□ -0.75
SPIDR-212ENST00000519661 PCNX3Q9H6A9 2034 aa10.36□□□□□ -0.75
SPIDR-212ENST00000519661 CELSR2Q9HCU4 2923 aa10.36□□□□□ -0.75
SPIDR-212ENST00000519661 GJE1A6NN92 205 aa10.36□□□□□ -0.75
SPIDR-212ENST00000519661 KDM4EB2RXH2 506 aaPredicted RBP10.36□□□□□ -0.75
SPIDR-212ENST00000519661 H0Y3Z8 333 aa10.36□□□□□ -0.75
SPIDR-212ENST00000519661 GTPBP1O00178 669 aaKnown RBP10.36□□□□□ -0.75
SPIDR-212ENST00000519661 GCM2O75603 506 aaPredicted RBP10.36□□□□□ -0.75
SPIDR-212ENST00000519661 PABPC4LP0CB38 370 aaKnown RBP10.36□□□□□ -0.75
SPIDR-212ENST00000519661 FCGR2AP12318 317 aa10.36□□□□□ -0.75
SPIDR-212ENST00000519661 IL7RP16871 459 aa10.36□□□□□ -0.75
SPIDR-212ENST00000519661 IL11P20809 199 aa10.36□□□□□ -0.75
SPIDR-212ENST00000519661 SLC6A2P23975 617 aa10.36□□□□□ -0.75
SPIDR-212ENST00000519661 PRDX6P30041 224 aa10.36□□□□□ -0.75
SPIDR-212ENST00000519661 SLC1A3P43003 542 aa10.36□□□□□ -0.75
SPIDR-212ENST00000519661 ZNF136P52737 540 aa10.36□□□□□ -0.75
SPIDR-212ENST00000519661 SESN3P58005 492 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms