RNA–Protein interactions for RNA: ENST00000519656.1

EFR3A-202, Transcript of EFR3 homolog A, humanhuman

TSL 1 (best) BASIC

Gene EFR3A, Length 5,247 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3A-202ENST00000519656 TGFBR3LH3BV60 316 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 C19orf84I3L1E1 186 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 MAGEB3O15480 346 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 MPZL1O95297 269 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 HPNP05981 417 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 LIPFP07098 398 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 PRPS2P11908 318 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 PGAM1P18669 254 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 ACHEP22303 614 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 CFPP27918 469 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 BTCP35070 178 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 COILP38432 576 aaPredicted RBP2.56□□□□□ -2
EFR3A-202ENST00000519656 PCBD1P61457 104 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 TRIM25Q14258 630 aaKnown RBP2.56□□□□□ -2
EFR3A-202ENST00000519656 HLXQ14774 488 aaPredicted RBP2.56□□□□□ -2
EFR3A-202ENST00000519656 TRIP13Q15645 432 aaPredicted RBP2.56□□□□□ -2
EFR3A-202ENST00000519656 CPSF6Q16630 551 aaKnown RBP eCLIP2.56□□□□□ -2
EFR3A-202ENST00000519656 EIPR1Q53HC9 387 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 HSP90B2PQ58FF3 399 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 ACSBG2Q5FVE4 666 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 LIPJQ5W064 366 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 FRMPD2BQ6IN97 320 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 CYHR1Q6ZMK1 362 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 SLC22A9Q8IVM8 553 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 PHC2Q8IXK0 858 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 C17orf47Q8NEP4 570 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 UTP15Q8TED0 518 aaKnown RBP2.56□□□□□ -2
EFR3A-202ENST00000519656 PPCDCQ96CD2 204 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 WFIKKN1Q96NZ8 548 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 RBP7Q96R05 134 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 SNX18Q96RF0 628 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 SH3GL1Q99961 368 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 SH3GL3Q99963 347 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 CITED2Q99967 270 aaPredicted RBP2.56□□□□□ -2
EFR3A-202ENST00000519656 LMF2Q9BU23 707 aaKnown RBP2.56□□□□□ -2
EFR3A-202ENST00000519656 NPFFR1Q9GZQ6 430 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 WWTR1Q9GZV5 400 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 NOX4Q9NPH5 578 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 KRT84Q9NSB2 600 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 H2AFY2Q9P0M6 372 aaPredicted RBP2.56□□□□□ -2
EFR3A-202ENST00000519656 IFNKQ9P0W0 207 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 SPATA2Q9UM82 520 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 SLC22A14Q9Y267 594 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 CARD8Q9Y2G2 431 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 MTO1Q9Y2Z2 717 aaKnown RBP2.56□□□□□ -2
EFR3A-202ENST00000519656 DNAH3Q8TD57 4116 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 NBEAL1Q6ZS30 2694 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 PPP1R2P9O14990 202 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 MSMBP08118 114 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 CCL3P10147 92 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 CD79AP11912 226 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 HOXB4P17483 251 aaPredicted RBP2.56□□□□□ -2
EFR3A-202ENST00000519656 PRTN3P24158 256 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 CNTFP26441 200 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 ELK4P28324 431 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 ECHS1P30084 290 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 CCR7P32248 378 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 SLC7A2P52569 658 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 GFRA1P56159 465 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 VBP1P61758 197 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 REEP5Q00765 189 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 SYT16Q17RD7 645 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 C6orf52Q5T4I8 152 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 HHATQ5VTY9 493 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 ZCCHC12Q6PEW1 402 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 LRIG3Q6UXM1 1119 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 JAZF1Q86VZ6 243 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 PAPD5Q8NDF8 572 aaKnown RBP2.56□□□□□ -2
EFR3A-202ENST00000519656 OR52N5Q8NH56 324 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 VANGL1Q8TAA9 524 aaPredicted RBP2.56□□□□□ -2
EFR3A-202ENST00000519656 EXOSC8Q96B26 276 aaKnown RBP2.56□□□□□ -2
EFR3A-202ENST00000519656 TUBA1CQ9BQE3 449 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 HCAR1Q9BXC0 346 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 HINT3Q9NQE9 182 aaKnown RBP2.56□□□□□ -2
EFR3A-202ENST00000519656 HDGFL3Q9Y3E1 203 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 KLK4Q9Y5K2 254 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 ANKRD12Q6UB98 2062 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 hCG_1818297A0A087WSY0 165 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 ELOA3DA6NLF2 546 aaPredicted RBP2.56□□□□□ -2
EFR3A-202ENST00000519656 SNTNA6NMZ2 147 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 CCRL2O00421 344 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 PLOD3O60568 738 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 EIF4E2O60573 245 aaKnown RBP2.56□□□□□ -2
EFR3A-202ENST00000519656 PNPP00491 289 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 TGFB1P01137 390 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 CELA3BP08861 270 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 FBP1P09467 338 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 CD33P20138 364 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 SSTR4P31391 388 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 NAA10P41227 235 aaPredicted RBP2.56□□□□□ -2
EFR3A-202ENST00000519656 ZNF140P52738 457 aaPredicted RBP2.56□□□□□ -2
EFR3A-202ENST00000519656 CDKL1Q00532 357 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 C2orf80Q0P641 193 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 ZP4Q12836 540 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 NAB1Q13506 487 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 ADRM1Q16186 407 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 NTRK2Q16620 822 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 ELOA3BQ3SY89 546 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 NHLRC1Q6VVB1 395 aa2.56□□□□□ -2
EFR3A-202ENST00000519656 ZNF620Q6ZNG0 422 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms