RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	SERINC1	Q9NRX5	453 aa		21.71	■■□□□ 1.07
CNOT7-204	ENST00000518885	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	21.71	■■□□□ 1.07
CNOT7-204	ENST00000518885	THUMPD1	Q9NXG2	353 aa	Known RBP	21.71	■■□□□ 1.07
CNOT7-204	ENST00000518885	PROCR	Q9UNN8	238 aa		21.71	■■□□□ 1.07
CNOT7-204	ENST00000518885	FAM234B	A2RU67	622 aa		21.7	■■□□□ 1.06
CNOT7-204	ENST00000518885	TMEM247	A6NEH6	219 aa		21.7	■■□□□ 1.06
CNOT7-204	ENST00000518885		A6NNC1	897 aa		21.7	■■□□□ 1.06
CNOT7-204	ENST00000518885		C9JVG2	144 aa		21.7	■■□□□ 1.06
CNOT7-204	ENST00000518885	HMGN4	O00479	90 aa		21.7	■■□□□ 1.06
CNOT7-204	ENST00000518885	TNFSF11	O14788	317 aa		21.7	■■□□□ 1.06
CNOT7-204	ENST00000518885	CXCL13	O43927	109 aa		21.7	■■□□□ 1.06
CNOT7-204	ENST00000518885	CTAG2	O75638	210 aa		21.7	■■□□□ 1.06
CNOT7-204	ENST00000518885	SLC7A1	P30825	629 aa		21.7	■■□□□ 1.06
CNOT7-204	ENST00000518885	RNF144A	P50876	292 aa	Predicted RBP	21.7	■■□□□ 1.06
CNOT7-204	ENST00000518885	PPP2R2A	P63151	447 aa		21.7	■■□□□ 1.06
CNOT7-204	ENST00000518885	SKP2	Q13309	424 aa		21.7	■■□□□ 1.06
CNOT7-204	ENST00000518885	DAZAP2	Q15038	168 aa	Predicted RBP	21.7	■■□□□ 1.06
CNOT7-204	ENST00000518885	QPRT	Q15274	297 aa		21.7	■■□□□ 1.06
CNOT7-204	ENST00000518885	SLC25A53	Q5H9E4	307 aa		21.7	■■□□□ 1.06
CNOT7-204	ENST00000518885	TYW3	Q6IPR3	259 aa	Known RBP	21.7	■■□□□ 1.06
CNOT7-204	ENST00000518885	MAVS	Q7Z434	540 aa		21.7	■■□□□ 1.06
CNOT7-204	ENST00000518885	CMIP	Q8IY22	773 aa		21.7	■■□□□ 1.06
CNOT7-204	ENST00000518885	ADGRG7	Q96K78	797 aa		21.7	■■□□□ 1.06
CNOT7-204	ENST00000518885	INPP5K	Q9BT40	448 aa		21.7	■■□□□ 1.06
CNOT7-204	ENST00000518885	CLEC4M	Q9H2X3	399 aa	Predicted RBP	21.7	■■□□□ 1.06
CNOT7-204	ENST00000518885	CALML5	Q9NZT1	146 aa		21.7	■■□□□ 1.06
CNOT7-204	ENST00000518885	SPIN1	Q9Y657	262 aa	Predicted RBP	21.7	■■□□□ 1.06
CNOT7-204	ENST00000518885	CASK	O14936	926 aa		21.69	■■□□□ 1.06
CNOT7-204	ENST00000518885	GSN	P06396	782 aa		21.69	■■□□□ 1.06
CNOT7-204	ENST00000518885	UBTFL6	P0CB48	400 aa	Predicted RBP	21.69	■■□□□ 1.06
CNOT7-204	ENST00000518885	ZCCHC18	P0CG32	403 aa		21.69	■■□□□ 1.06
CNOT7-204	ENST00000518885	H2AFX	P16104	143 aa	Predicted RBP	21.69	■■□□□ 1.06
CNOT7-204	ENST00000518885	SFTPD	P35247	375 aa		21.69	■■□□□ 1.06
CNOT7-204	ENST00000518885	KIR2DL2	P43627	348 aa	Predicted RBP	21.69	■■□□□ 1.06
CNOT7-204	ENST00000518885	SLC6A8	P48029	635 aa		21.69	■■□□□ 1.06
CNOT7-204	ENST00000518885	KCNJ5	P48544	419 aa		21.69	■■□□□ 1.06
CNOT7-204	ENST00000518885	KRTAP10-9	P60411	292 aa		21.69	■■□□□ 1.06
CNOT7-204	ENST00000518885	SNTB1	Q13884	538 aa	Known RBP	21.69	■■□□□ 1.06
CNOT7-204	ENST00000518885	CTU2	Q2VPK5	515 aa	Known RBP	21.69	■■□□□ 1.06
CNOT7-204	ENST00000518885	C3orf33	Q6P1S2	294 aa		21.69	■■□□□ 1.06
CNOT7-204	ENST00000518885	OR6K3	Q8NGY3	331 aa		21.69	■■□□□ 1.06
CNOT7-204	ENST00000518885	OSTF1	Q92882	214 aa		21.69	■■□□□ 1.06
CNOT7-204	ENST00000518885	CCDC28B	Q9BUN5	200 aa		21.69	■■□□□ 1.06
CNOT7-204	ENST00000518885	THUMPD3	Q9BV44	507 aa	Known RBP	21.69	■■□□□ 1.06
CNOT7-204	ENST00000518885	CACYBP	Q9HB71	228 aa	Known RBP	21.69	■■□□□ 1.06
CNOT7-204	ENST00000518885	PDZD2	O15018	2839 aa		21.69	■■□□□ 1.06
CNOT7-204	ENST00000518885	NUP214	P35658	2090 aa	Predicted RBP	21.68	■■□□□ 1.06
CNOT7-204	ENST00000518885	ETV2	O00321	342 aa	Predicted RBP	21.68	■■□□□ 1.06
CNOT7-204	ENST00000518885	OIP5	O43482	229 aa		21.68	■■□□□ 1.06
CNOT7-204	ENST00000518885	H6PD	O95479	791 aa		21.68	■■□□□ 1.06
CNOT7-204	ENST00000518885	NR2F1	P10589	423 aa		21.68	■■□□□ 1.06
CNOT7-204	ENST00000518885	RNPS1	Q15287	305 aa	Known RBP	21.68	■■□□□ 1.06
CNOT7-204	ENST00000518885	NDUFAF6	Q330K2	333 aa		21.68	■■□□□ 1.06
CNOT7-204	ENST00000518885	TIGD2	Q4W5G0	525 aa		21.68	■■□□□ 1.06
CNOT7-204	ENST00000518885	C6orf10	Q5SRN2	563 aa		21.68	■■□□□ 1.06
CNOT7-204	ENST00000518885	VWA1	Q6PCB0	445 aa		21.68	■■□□□ 1.06
CNOT7-204	ENST00000518885	FRRS1	Q6ZNA5	592 aa		21.68	■■□□□ 1.06
CNOT7-204	ENST00000518885	LRRC74B	Q6ZQY2	392 aa		21.68	■■□□□ 1.06
CNOT7-204	ENST00000518885	BTLA	Q7Z6A9	289 aa		21.68	■■□□□ 1.06
CNOT7-204	ENST00000518885	STK32C	Q86UX6	486 aa		21.68	■■□□□ 1.06
CNOT7-204	ENST00000518885	LURAP1L	Q8IV03	231 aa		21.68	■■□□□ 1.06
CNOT7-204	ENST00000518885	RAD21L1	Q9H4I0	556 aa		21.68	■■□□□ 1.06
CNOT7-204	ENST00000518885	MTHFD2L	Q9H903	347 aa	Predicted RBP	21.68	■■□□□ 1.06
CNOT7-204	ENST00000518885	EXOSC3	Q9NQT5	275 aa	Known RBP	21.68	■■□□□ 1.06
CNOT7-204	ENST00000518885	RASSF1	Q9NS23	344 aa		21.68	■■□□□ 1.06
CNOT7-204	ENST00000518885	P2RX2	Q9UBL9	471 aa		21.68	■■□□□ 1.06
CNOT7-204	ENST00000518885		A0A0J9YW62	118 aa		21.67	■■□□□ 1.06
CNOT7-204	ENST00000518885	SH3D21	A4FU49	640 aa		21.67	■■□□□ 1.06
CNOT7-204	ENST00000518885	SS18L1	O75177	396 aa	Predicted RBP	21.67	■■□□□ 1.06
CNOT7-204	ENST00000518885	AQP8	O94778	261 aa		21.67	■■□□□ 1.06
CNOT7-204	ENST00000518885	OPN1LW	P04000	364 aa		21.67	■■□□□ 1.06
CNOT7-204	ENST00000518885	POU2F1	P14859	743 aa		21.67	■■□□□ 1.06
CNOT7-204	ENST00000518885	UQCRB	P14927	111 aa		21.67	■■□□□ 1.06
CNOT7-204	ENST00000518885	FKBP2	P26885	142 aa	Known RBP	21.67	■■□□□ 1.06
CNOT7-204	ENST00000518885	CD79B	P40259	229 aa		21.67	■■□□□ 1.06
CNOT7-204	ENST00000518885	CDKN2C	P42773	168 aa		21.67	■■□□□ 1.06
CNOT7-204	ENST00000518885	MRPL19	P49406	292 aa	Known RBP	21.67	■■□□□ 1.06
CNOT7-204	ENST00000518885	ARFGAP2	Q8N6H7	521 aa		21.67	■■□□□ 1.06
CNOT7-204	ENST00000518885	ZNF563	Q8TA94	476 aa		21.67	■■□□□ 1.06
CNOT7-204	ENST00000518885	ZFP90	Q8TF47	636 aa		21.67	■■□□□ 1.06
CNOT7-204	ENST00000518885	SLC25A43	Q8WUT9	341 aa	Predicted RBP	21.67	■■□□□ 1.06
CNOT7-204	ENST00000518885	NPAS1	Q99742	590 aa		21.67	■■□□□ 1.06
CNOT7-204	ENST00000518885	TACO1	Q9BSH4	297 aa	Known RBP	21.67	■■□□□ 1.06
CNOT7-204	ENST00000518885	SLCO1B3	Q9NPD5	702 aa		21.67	■■□□□ 1.06
CNOT7-204	ENST00000518885	TMEM45A	Q9NWC5	275 aa		21.67	■■□□□ 1.06
CNOT7-204	ENST00000518885	KCNE5	Q9UJ90	142 aa		21.67	■■□□□ 1.06
CNOT7-204	ENST00000518885	PRDM4	Q9UKN5	801 aa		21.67	■■□□□ 1.06
CNOT7-204	ENST00000518885	CSMD2	Q7Z408	3487 aa		21.67	■■□□□ 1.06
CNOT7-204	ENST00000518885	DNAJA2	O60884	412 aa		21.66	■■□□□ 1.06
CNOT7-204	ENST00000518885	NTN1	O95631	604 aa		21.66	■■□□□ 1.06
CNOT7-204	ENST00000518885	CRAT	P43155	626 aa		21.66	■■□□□ 1.06
CNOT7-204	ENST00000518885	AQP5	P55064	265 aa		21.66	■■□□□ 1.06
CNOT7-204	ENST00000518885	KCNJ10	P78508	379 aa		21.66	■■□□□ 1.06
CNOT7-204	ENST00000518885	CHRNE	Q04844	493 aa		21.66	■■□□□ 1.06
CNOT7-204	ENST00000518885	GUSBP1	Q15486	140 aa		21.66	■■□□□ 1.06
CNOT7-204	ENST00000518885	TOMM34	Q15785	309 aa	Predicted RBP	21.66	■■□□□ 1.06
CNOT7-204	ENST00000518885	TMEM176B	Q3YBM2	270 aa	Predicted RBP	21.66	■■□□□ 1.06
CNOT7-204	ENST00000518885	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	21.66	■■□□□ 1.06
CNOT7-204	ENST00000518885	PEX5L	Q8IYB4	626 aa		21.66	■■□□□ 1.06
CNOT7-204	ENST00000518885	SLC43A2	Q8N370	569 aa		21.66	■■□□□ 1.06

Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms