RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 ADSSP30520 456 aa3.16□□□□□ -1.9
SQLE-202ENST00000518604 EPHX2P34913 555 aa3.16□□□□□ -1.9
SQLE-202ENST00000518604 BTDP43251 543 aa3.16□□□□□ -1.9
SQLE-202ENST00000518604 STX17P56962 302 aa3.16□□□□□ -1.9
SQLE-202ENST00000518604 CHRNB3Q05901 458 aa3.16□□□□□ -1.9
SQLE-202ENST00000518604 KLHL30Q0D2K2 578 aa3.16□□□□□ -1.9
SQLE-202ENST00000518604 ELP6Q0PNE2 266 aa3.16□□□□□ -1.9
SQLE-202ENST00000518604 PJVKQ0ZLH3 352 aa3.16□□□□□ -1.9
SQLE-202ENST00000518604 SYPL1Q16563 259 aa3.16□□□□□ -1.9
SQLE-202ENST00000518604 NADK2Q4G0N4 442 aa3.16□□□□□ -1.9
SQLE-202ENST00000518604 SPATA46Q5T0L3 261 aa3.16□□□□□ -1.9
SQLE-202ENST00000518604 GET4Q7L5D6 327 aaPredicted RBP3.16□□□□□ -1.9
SQLE-202ENST00000518604 HSD17B13Q7Z5P4 300 aaPredicted RBP3.16□□□□□ -1.9
SQLE-202ENST00000518604 TMEM179BQ7Z7N9 219 aa3.16□□□□□ -1.9
SQLE-202ENST00000518604 ZDHHC21Q8IVQ6 265 aa3.16□□□□□ -1.9
SQLE-202ENST00000518604 MTURNQ8N3F0 131 aa3.16□□□□□ -1.9
SQLE-202ENST00000518604 DHRSXQ8N5I4 330 aa3.16□□□□□ -1.9
SQLE-202ENST00000518604 SYT14Q8NB59 555 aa3.16□□□□□ -1.9
SQLE-202ENST00000518604 DENND6BQ8NEG7 585 aa3.16□□□□□ -1.9
SQLE-202ENST00000518604 BBS1Q8NFJ9 593 aa3.16□□□□□ -1.9
SQLE-202ENST00000518604 OR2L5Q8NG80 312 aa3.16□□□□□ -1.9
SQLE-202ENST00000518604 OR10H4Q8NGA5 316 aa3.16□□□□□ -1.9
SQLE-202ENST00000518604 SETD7Q8WTS6 366 aaKnown RBP3.16□□□□□ -1.9
SQLE-202ENST00000518604 TCTEX1D2Q8WW35 142 aa3.16□□□□□ -1.9
SQLE-202ENST00000518604 OSTF1Q92882 214 aa3.16□□□□□ -1.9
SQLE-202ENST00000518604 C12orf66Q96MD2 445 aa3.16□□□□□ -1.9
SQLE-202ENST00000518604 TSGA13Q96PP4 275 aa3.16□□□□□ -1.9
SQLE-202ENST00000518604 TUBGCP2Q9BSJ2 902 aa3.16□□□□□ -1.9
SQLE-202ENST00000518604 CHIAQ9BZP6 476 aa3.16□□□□□ -1.9
SQLE-202ENST00000518604 TMEM117Q9H0C3 514 aa3.16□□□□□ -1.9
SQLE-202ENST00000518604 PTGES2Q9H7Z7 377 aa3.16□□□□□ -1.9
SQLE-202ENST00000518604 TBK1Q9UHD2 729 aa3.16□□□□□ -1.9
SQLE-202ENST00000518604 XPO7Q9UIA9 1087 aaKnown RBP3.16□□□□□ -1.9
SQLE-202ENST00000518604 ANGPTL2Q9UKU9 493 aa3.16□□□□□ -1.9
SQLE-202ENST00000518604 ISY1Q9ULR0 285 aaKnown RBP3.16□□□□□ -1.9
SQLE-202ENST00000518604 ALG6Q9Y672 507 aa3.16□□□□□ -1.9
SQLE-202ENST00000518604 KDRP35968 1356 aa3.15□□□□□ -1.9
SQLE-202ENST00000518604 HCN1O60741 890 aa3.15□□□□□ -1.91
SQLE-202ENST00000518604 NEBLO76041 1014 aa3.15□□□□□ -1.91
SQLE-202ENST00000518604 OR8U8P0C7N1 319 aa3.15□□□□□ -1.91
SQLE-202ENST00000518604 DUX4L4P0CJ87 422 aa3.15□□□□□ -1.91
SQLE-202ENST00000518604 CPN1P15169 458 aa3.15□□□□□ -1.91
SQLE-202ENST00000518604 ZNF19P17023 458 aa3.15□□□□□ -1.91
SQLE-202ENST00000518604 HPDP32754 393 aaPredicted RBP3.15□□□□□ -1.91
SQLE-202ENST00000518604 PPT1P50897 306 aa3.15□□□□□ -1.91
SQLE-202ENST00000518604 CNTN2Q02246 1040 aa3.15□□□□□ -1.91
SQLE-202ENST00000518604 EGFEM1PQ0D2K5 195 aa3.15□□□□□ -1.91
SQLE-202ENST00000518604 SNTB2Q13425 540 aaKnown RBP3.15□□□□□ -1.91
SQLE-202ENST00000518604 SELPLGQ14242 412 aa3.15□□□□□ -1.91
SQLE-202ENST00000518604 TAF7Q15545 349 aaPredicted RBP3.15□□□□□ -1.91
SQLE-202ENST00000518604 OTPQ5XKR4 325 aa3.15□□□□□ -1.91
SQLE-202ENST00000518604 WSCD1Q658N2 575 aa3.15□□□□□ -1.91
SQLE-202ENST00000518604 FAM199XQ6PEV8 388 aaPredicted RBP3.15□□□□□ -1.91
SQLE-202ENST00000518604 ACOT1Q86TX2 421 aa3.15□□□□□ -1.91
SQLE-202ENST00000518604 LCA5Q86VQ0 697 aa3.15□□□□□ -1.91
SQLE-202ENST00000518604 TPRA1Q86W33 373 aa3.15□□□□□ -1.91
SQLE-202ENST00000518604 LRRC43Q8N309 656 aa3.15□□□□□ -1.91
SQLE-202ENST00000518604 SVOPLQ8N434 492 aa3.15□□□□□ -1.91
SQLE-202ENST00000518604 RLN3Q8WXF3 142 aa3.15□□□□□ -1.91
SQLE-202ENST00000518604 FAM3CQ92520 227 aa3.15□□□□□ -1.91
SQLE-202ENST00000518604 MRPS31Q92665 395 aaKnown RBP3.15□□□□□ -1.91
SQLE-202ENST00000518604 SH3YL1Q96HL8 342 aaPredicted RBP3.15□□□□□ -1.91
SQLE-202ENST00000518604 CYYR1Q96J86 154 aa3.15□□□□□ -1.91
SQLE-202ENST00000518604 TECTBQ96PL2 329 aa3.15□□□□□ -1.91
SQLE-202ENST00000518604 ALG12Q9BV10 488 aa3.15□□□□□ -1.91
SQLE-202ENST00000518604 MEAF6Q9HAF1 191 aa3.15□□□□□ -1.91
SQLE-202ENST00000518604 PDFQ9HBH1 243 aa3.15□□□□□ -1.91
SQLE-202ENST00000518604 MARCH5Q9NX47 278 aa3.15□□□□□ -1.91
SQLE-202ENST00000518604 CELA1Q9UNI1 258 aa3.15□□□□□ -1.91
SQLE-202ENST00000518604 SCML2Q9UQR0 700 aa3.15□□□□□ -1.91
SQLE-202ENST00000518604 MRPS7Q9Y2R9 242 aaKnown RBP3.15□□□□□ -1.91
SQLE-202ENST00000518604 ARHGAP23Q9P227 1491 aa3.15□□□□□ -1.91
SQLE-202ENST00000518604 MBLAC1A4D2B0 266 aaPredicted RBP3.14□□□□□ -1.91
SQLE-202ENST00000518604 TUBAL3A6NHL2 446 aa3.14□□□□□ -1.91
SQLE-202ENST00000518604 BTN3A3O00478 584 aa3.14□□□□□ -1.91
SQLE-202ENST00000518604 BBOX1O75936 387 aa3.14□□□□□ -1.91
SQLE-202ENST00000518604 ATP6V1C1P21283 382 aa3.14□□□□□ -1.91
SQLE-202ENST00000518604 GABRR1P24046 479 aa3.14□□□□□ -1.91
SQLE-202ENST00000518604 YWHABP31946 246 aaKnown RBP3.14□□□□□ -1.91
SQLE-202ENST00000518604 CA8P35219 290 aa3.14□□□□□ -1.91
SQLE-202ENST00000518604 ORC2Q13416 577 aaPredicted RBP3.14□□□□□ -1.91
SQLE-202ENST00000518604 PDK4Q16654 411 aa3.14□□□□□ -1.91
SQLE-202ENST00000518604 USH1GQ495M9 461 aa3.14□□□□□ -1.91
SQLE-202ENST00000518604 SLC25A24Q6NUK1 477 aa3.14□□□□□ -1.91
SQLE-202ENST00000518604 ZNF544Q6NX49 715 aa3.14□□□□□ -1.91
SQLE-202ENST00000518604 ARMCX2Q7L311 632 aa3.14□□□□□ -1.91
SQLE-202ENST00000518604 KIAA1328Q86T90 577 aa3.14□□□□□ -1.91
SQLE-202ENST00000518604 MOB3BQ86TA1 216 aa3.14□□□□□ -1.91
SQLE-202ENST00000518604 ZNF589Q86UQ0 364 aaPredicted RBP3.14□□□□□ -1.91
SQLE-202ENST00000518604 NRMQ8IXM6 262 aa3.14□□□□□ -1.91
SQLE-202ENST00000518604 ZNF100Q8IYN0 542 aa3.14□□□□□ -1.91
SQLE-202ENST00000518604 KIR3DL3Q8N743 410 aa3.14□□□□□ -1.91
SQLE-202ENST00000518604 OR2AP1Q8NGE2 309 aa3.14□□□□□ -1.91
SQLE-202ENST00000518604 FRAT1Q92837 279 aaPredicted RBP3.14□□□□□ -1.91
SQLE-202ENST00000518604 RAB7BQ96AH8 199 aa3.14□□□□□ -1.91
SQLE-202ENST00000518604 MS4A14Q96JA4 679 aa3.14□□□□□ -1.91
SQLE-202ENST00000518604 SENP8Q96LD8 212 aa3.14□□□□□ -1.91
SQLE-202ENST00000518604 RIT2Q99578 217 aa3.14□□□□□ -1.91
SQLE-202ENST00000518604 SLC35A5Q9BS91 424 aa3.14□□□□□ -1.91
SQLE-202ENST00000518604 GLIPR2Q9H4G4 154 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms