RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 HDHD2Q9H0R4 259 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 TDRD3Q9H7E2 651 aaKnown RBP2.78□□□□□ -1.96
VPS13B-207ENST00000518569 TMEM165Q9HC07 324 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 IL26Q9NPH9 171 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 FKBP14Q9NWM8 211 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 SLC39A1Q9NY26 324 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 PURGQ9UJV8 347 aaKnown RBP2.78□□□□□ -1.96
VPS13B-207ENST00000518569 KIAA1257Q9ULG3 409 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 CHMP2BQ9UQN3 213 aa2.78□□□□□ -1.96
VPS13B-207ENST00000518569 EPRSP07814 1512 aaKnown RBP2.78□□□□□ -1.97
VPS13B-207ENST00000518569 ABCA10Q8WWZ4 1543 aa2.78□□□□□ -1.97
VPS13B-207ENST00000518569 KIAA0586Q9BVV6 1533 aa2.78□□□□□ -1.97
VPS13B-207ENST00000518569 SRCAPQ6ZRS2 3230 aa2.78□□□□□ -1.97
VPS13B-207ENST00000518569 UBE4BO95155 1302 aa2.77□□□□□ -1.97
VPS13B-207ENST00000518569 A0A0U1RRA0 63 aa2.77□□□□□ -1.97
VPS13B-207ENST00000518569 TTC26A0AVF1 554 aa2.77□□□□□ -1.97
VPS13B-207ENST00000518569 NPIPA2E9PIF3 369 aa2.77□□□□□ -1.97
VPS13B-207ENST00000518569 PSMD11O00231 422 aa2.77□□□□□ -1.97
VPS13B-207ENST00000518569 XPO1O14980 1071 aaKnown RBP2.77□□□□□ -1.97
VPS13B-207ENST00000518569 CYTH3O43739 400 aa2.77□□□□□ -1.97
VPS13B-207ENST00000518569 B4GALT2O60909 372 aa2.77□□□□□ -1.97
VPS13B-207ENST00000518569 STK17BO94768 372 aa2.77□□□□□ -1.97
VPS13B-207ENST00000518569 PTBP3O95758 552 aaKnown RBP2.77□□□□□ -1.97
VPS13B-207ENST00000518569 CSTAP01040 98 aa2.77□□□□□ -1.97
VPS13B-207ENST00000518569 IGKV3-15P01624 115 aa2.77□□□□□ -1.97
VPS13B-207ENST00000518569 ASNSP08243 561 aa2.77□□□□□ -1.97
VPS13B-207ENST00000518569 IGFBP1P08833 259 aaPredicted RBP2.77□□□□□ -1.97
VPS13B-207ENST00000518569 PVRP15151 417 aa2.77□□□□□ -1.97
VPS13B-207ENST00000518569 GNSP15586 552 aa2.77□□□□□ -1.97
VPS13B-207ENST00000518569 MSR1P21757 451 aa2.77□□□□□ -1.97
VPS13B-207ENST00000518569 KRTAP5-9P26371 169 aa2.77□□□□□ -1.97
VPS13B-207ENST00000518569 PTPN4P29074 926 aa2.77□□□□□ -1.97
VPS13B-207ENST00000518569 FNTAP49354 379 aa2.77□□□□□ -1.97
VPS13B-207ENST00000518569 GTF2A1P52655 376 aaPredicted RBP2.77□□□□□ -1.97
VPS13B-207ENST00000518569 SUCLG1P53597 346 aaKnown RBP2.77□□□□□ -1.97
VPS13B-207ENST00000518569 DSTNP60981 165 aa2.77□□□□□ -1.97
VPS13B-207ENST00000518569 YWHAGP61981 247 aaKnown RBP eCLIP2.77□□□□□ -1.97
VPS13B-207ENST00000518569 OTUD4Q01804 1114 aaKnown RBP2.77□□□□□ -1.97
VPS13B-207ENST00000518569 ZNF85Q03923 595 aa2.77□□□□□ -1.97
VPS13B-207ENST00000518569 PPIDQ08752 370 aaKnown RBP2.77□□□□□ -1.97
VPS13B-207ENST00000518569 PPIL2Q13356 520 aa2.77□□□□□ -1.97
VPS13B-207ENST00000518569 SNTB2Q13425 540 aaKnown RBP2.77□□□□□ -1.97
VPS13B-207ENST00000518569 PDIA5Q14554 519 aa2.77□□□□□ -1.97
VPS13B-207ENST00000518569 CARTPTQ16568 116 aa2.77□□□□□ -1.97
VPS13B-207ENST00000518569 RGS21Q2M5E4 152 aa2.77□□□□□ -1.97
VPS13B-207ENST00000518569 NKAIN1Q4KMZ8 207 aa2.77□□□□□ -1.97
VPS13B-207ENST00000518569 SPANXN2Q5MJ10 180 aa2.77□□□□□ -1.97
VPS13B-207ENST00000518569 HHATQ5VTY9 493 aa2.77□□□□□ -1.97
VPS13B-207ENST00000518569 ATL3Q6DD88 541 aa2.77□□□□□ -1.97
VPS13B-207ENST00000518569 OR6B2Q6IFH4 312 aa2.77□□□□□ -1.97
VPS13B-207ENST00000518569 BLOC1S2Q6QNY1 142 aa2.77□□□□□ -1.97
VPS13B-207ENST00000518569 SASS6Q6UVJ0 657 aa2.77□□□□□ -1.97
VPS13B-207ENST00000518569 FAM159AQ6UWV7 190 aa2.77□□□□□ -1.97
VPS13B-207ENST00000518569 BZW1Q7L1Q6 419 aaKnown RBP2.77□□□□□ -1.97
VPS13B-207ENST00000518569 GOLGA7Q7Z5G4 137 aa2.77□□□□□ -1.97
VPS13B-207ENST00000518569 CENPLQ8N0S6 344 aaPredicted RBP2.77□□□□□ -1.97
VPS13B-207ENST00000518569 UBE2J2Q8N2K1 259 aa2.77□□□□□ -1.97
VPS13B-207ENST00000518569 MRAPQ8TCY5 172 aa2.77□□□□□ -1.97
VPS13B-207ENST00000518569 TFB1MQ8WVM0 346 aaKnown RBP2.77□□□□□ -1.97
VPS13B-207ENST00000518569 KIFAP3Q92845 792 aa2.77□□□□□ -1.97
VPS13B-207ENST00000518569 CIDECQ96AQ7 238 aaPredicted RBP2.77□□□□□ -1.97
VPS13B-207ENST00000518569 MRPL38Q96DV4 380 aaKnown RBP2.77□□□□□ -1.97
VPS13B-207ENST00000518569 RANBP9Q96S59 729 aa2.77□□□□□ -1.97
VPS13B-207ENST00000518569 SECISBP2Q96T21 854 aaKnown RBP2.77□□□□□ -1.97
VPS13B-207ENST00000518569 CYTH2Q99418 400 aa2.77□□□□□ -1.97
VPS13B-207ENST00000518569 NDUFAF3Q9BU61 184 aa2.77□□□□□ -1.97
VPS13B-207ENST00000518569 FICDQ9BVA6 458 aa2.77□□□□□ -1.97
VPS13B-207ENST00000518569 MRPL37Q9BZE1 423 aaKnown RBP2.77□□□□□ -1.97
VPS13B-207ENST00000518569 SIRPDQ9H106 197 aa2.77□□□□□ -1.97
VPS13B-207ENST00000518569 COG4Q9H9E3 785 aa2.77□□□□□ -1.97
VPS13B-207ENST00000518569 UCK1Q9HA47 277 aa2.77□□□□□ -1.97
VPS13B-207ENST00000518569 ADGRL4Q9HBW9 690 aa2.77□□□□□ -1.97
VPS13B-207ENST00000518569 ESM1Q9NQ30 184 aa2.77□□□□□ -1.97
VPS13B-207ENST00000518569 HYPKQ9NX55 129 aa2.77□□□□□ -1.97
VPS13B-207ENST00000518569 NDUFA13Q9P0J0 144 aa2.77□□□□□ -1.97
VPS13B-207ENST00000518569 RNF115Q9Y4L5 304 aa2.77□□□□□ -1.97
VPS13B-207ENST00000518569 AP4B1Q9Y6B7 739 aa2.77□□□□□ -1.97
VPS13B-207ENST00000518569 MAD1L1Q9Y6D9 718 aa2.77□□□□□ -1.97
VPS13B-207ENST00000518569 BZW2Q9Y6E2 419 aaKnown RBP2.77□□□□□ -1.97
VPS13B-207ENST00000518569 PLB1Q6P1J6 1458 aa2.77□□□□□ -1.97
VPS13B-207ENST00000518569 TMEM89A2RUT3 159 aa2.76□□□□□ -1.97
VPS13B-207ENST00000518569 GOLGA6L4A6NEF3 574 aa2.76□□□□□ -1.97
VPS13B-207ENST00000518569 TRABD2BA6NFA1 517 aa2.76□□□□□ -1.97
VPS13B-207ENST00000518569 E9PMD0 336 aa2.76□□□□□ -1.97
VPS13B-207ENST00000518569 CTAG2O75638 210 aa2.76□□□□□ -1.97
VPS13B-207ENST00000518569 GJB5O95377 273 aa2.76□□□□□ -1.97
VPS13B-207ENST00000518569 UMPSP11172 480 aa2.76□□□□□ -1.97
VPS13B-207ENST00000518569 RPA2P15927 270 aa2.76□□□□□ -1.97
VPS13B-207ENST00000518569 CYP2B6P20813 491 aa2.76□□□□□ -1.97
VPS13B-207ENST00000518569 CPN2P22792 545 aa2.76□□□□□ -1.97
VPS13B-207ENST00000518569 TAGLN2P37802 199 aaKnown RBP2.76□□□□□ -1.97
VPS13B-207ENST00000518569 CDKN1BP46527 198 aa2.76□□□□□ -1.97
VPS13B-207ENST00000518569 MNAT1P51948 309 aa2.76□□□□□ -1.97
VPS13B-207ENST00000518569 ARHGDIBP52566 201 aa2.76□□□□□ -1.97
VPS13B-207ENST00000518569 METAP1P53582 386 aa2.76□□□□□ -1.97
VPS13B-207ENST00000518569 AIF1P55008 147 aa2.76□□□□□ -1.97
VPS13B-207ENST00000518569 KRTAP10-3P60369 221 aa2.76□□□□□ -1.97
VPS13B-207ENST00000518569 TSPAN5P62079 268 aa2.76□□□□□ -1.97
VPS13B-207ENST00000518569 YWHAEP62258 255 aaKnown RBP2.76□□□□□ -1.97
VPS13B-207ENST00000518569 RPL23AP62750 156 aaKnown RBP2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms