RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 ZNF527Q8NB42 609 aa10.08□□□□□ -0.8
TRAPPC9-203ENST00000517667 SPATA4Q8NEY3 305 aa10.08□□□□□ -0.8
TRAPPC9-203ENST00000517667 OR52N5Q8NH56 324 aa10.08□□□□□ -0.8
TRAPPC9-203ENST00000517667 FAM76AQ8TAV0 307 aa10.08□□□□□ -0.8
TRAPPC9-203ENST00000517667 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.08□□□□□ -0.8
TRAPPC9-203ENST00000517667 ZFAND2BQ8WV99 257 aa10.08□□□□□ -0.8
TRAPPC9-203ENST00000517667 ARL8AQ96BM9 186 aa10.08□□□□□ -0.8
TRAPPC9-203ENST00000517667 C3orf49Q96BT1 292 aa10.08□□□□□ -0.8
TRAPPC9-203ENST00000517667 MRGPRX4Q96LA9 322 aa10.08□□□□□ -0.8
TRAPPC9-203ENST00000517667 MS4A4EQ96PG1 132 aa10.08□□□□□ -0.8
TRAPPC9-203ENST00000517667 RAB17Q9H0T7 212 aa10.08□□□□□ -0.8
TRAPPC9-203ENST00000517667 ACSS3Q9H6R3 686 aa10.08□□□□□ -0.8
TRAPPC9-203ENST00000517667 EMC3Q9P0I2 261 aa10.08□□□□□ -0.8
TRAPPC9-203ENST00000517667 SLC25A15Q9Y619 301 aa10.08□□□□□ -0.8
TRAPPC9-203ENST00000517667 CCT8L1PA6NM43 557 aa10.07□□□□□ -0.8
TRAPPC9-203ENST00000517667 H3BNH8 94 aa10.07□□□□□ -0.8
TRAPPC9-203ENST00000517667 M0R1B8 84 aa10.07□□□□□ -0.8
TRAPPC9-203ENST00000517667 SMAD9O15198 467 aaKnown RBP10.07□□□□□ -0.8
TRAPPC9-203ENST00000517667 RAD51CO43502 376 aa10.07□□□□□ -0.8
TRAPPC9-203ENST00000517667 EFNA2O43921 213 aa10.07□□□□□ -0.8
TRAPPC9-203ENST00000517667 LY6HO94772 140 aa10.07□□□□□ -0.8
TRAPPC9-203ENST00000517667 INHBAP08476 426 aa10.07□□□□□ -0.8
TRAPPC9-203ENST00000517667 ZNF23P17027 643 aa10.07□□□□□ -0.8
TRAPPC9-203ENST00000517667 HTR6P50406 440 aa10.07□□□□□ -0.8
TRAPPC9-203ENST00000517667 P2RX1P51575 399 aa10.07□□□□□ -0.8
TRAPPC9-203ENST00000517667 CHRNEQ04844 493 aa10.07□□□□□ -0.8
TRAPPC9-203ENST00000517667 LCP2Q13094 533 aa10.07□□□□□ -0.8
TRAPPC9-203ENST00000517667 IQCCQ4KMZ1 466 aa10.07□□□□□ -0.8
TRAPPC9-203ENST00000517667 ZNF678Q5SXM1 525 aa10.07□□□□□ -0.8
TRAPPC9-203ENST00000517667 C1QTNF12Q5T7M4 302 aa10.07□□□□□ -0.8
TRAPPC9-203ENST00000517667 FAM219BQ5XKK7 198 aa10.07□□□□□ -0.8
TRAPPC9-203ENST00000517667 OR7E24Q6IFN5 339 aa10.07□□□□□ -0.8
TRAPPC9-203ENST00000517667 ZCCHC12Q6PEW1 402 aa10.07□□□□□ -0.8
TRAPPC9-203ENST00000517667 SZRD1Q7Z422 152 aa10.07□□□□□ -0.8
TRAPPC9-203ENST00000517667 UBE2J2Q8N2K1 259 aa10.07□□□□□ -0.8
TRAPPC9-203ENST00000517667 COX18Q8N8Q8 333 aa10.07□□□□□ -0.8
TRAPPC9-203ENST00000517667 NUP43Q8NFH3 380 aa10.07□□□□□ -0.8
TRAPPC9-203ENST00000517667 SGMS2Q8NHU3 365 aa10.07□□□□□ -0.8
TRAPPC9-203ENST00000517667 ZFP28Q8NHY6 868 aa10.07□□□□□ -0.8
TRAPPC9-203ENST00000517667 PHOSPHO1Q8TCT1 267 aa10.07□□□□□ -0.8
TRAPPC9-203ENST00000517667 ZNF300Q96RE9 604 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC9-203ENST00000517667 TAS2R16Q9NYV7 291 aa10.07□□□□□ -0.8
TRAPPC9-203ENST00000517667 NTMQ9P121 344 aa10.07□□□□□ -0.8
TRAPPC9-203ENST00000517667 ICAM5Q9UMF0 924 aa10.07□□□□□ -0.8
TRAPPC9-203ENST00000517667 ATP23Q9Y6H3 246 aa10.07□□□□□ -0.8
TRAPPC9-203ENST00000517667 HEATR1Q9H583 2144 aaKnown RBP10.07□□□□□ -0.8
TRAPPC9-203ENST00000517667 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.06□□□□□ -0.8
TRAPPC9-203ENST00000517667 A0A0A6YYJ9 748 aa10.06□□□□□ -0.8
TRAPPC9-203ENST00000517667 IGHV4-61A0A0C4DH41 118 aa10.06□□□□□ -0.8
TRAPPC9-203ENST00000517667 SLCO1B7G3V0H7 640 aa10.06□□□□□ -0.8
TRAPPC9-203ENST00000517667 PDPK1O15530 556 aa10.06□□□□□ -0.8
TRAPPC9-203ENST00000517667 ALOX5P09917 674 aa10.06□□□□□ -0.8
TRAPPC9-203ENST00000517667 SBK3P0C264 359 aa10.06□□□□□ -0.8
TRAPPC9-203ENST00000517667 ACP2P11117 423 aa10.06□□□□□ -0.8
TRAPPC9-203ENST00000517667 PRKCAP17252 672 aa10.06□□□□□ -0.8
TRAPPC9-203ENST00000517667 EDNRAP25101 427 aa10.06□□□□□ -0.8
TRAPPC9-203ENST00000517667 SRP14P37108 136 aaKnown RBP10.06□□□□□ -0.8
TRAPPC9-203ENST00000517667 SERPINB9P50453 376 aa10.06□□□□□ -0.8
TRAPPC9-203ENST00000517667 PRKAG1P54619 331 aa10.06□□□□□ -0.8
TRAPPC9-203ENST00000517667 PKNOX1P55347 436 aa10.06□□□□□ -0.8
TRAPPC9-203ENST00000517667 SNRPD2P62316 118 aaKnown RBP10.06□□□□□ -0.8
TRAPPC9-203ENST00000517667 PHC1P78364 1004 aa10.06□□□□□ -0.8
TRAPPC9-203ENST00000517667 TRADDQ15628 312 aa10.06□□□□□ -0.8
TRAPPC9-203ENST00000517667 DUSP5Q16690 384 aa10.06□□□□□ -0.8
TRAPPC9-203ENST00000517667 IMPG1Q17R60 797 aa10.06□□□□□ -0.8
TRAPPC9-203ENST00000517667 C3orf33Q6P1S2 294 aa10.06□□□□□ -0.8
TRAPPC9-203ENST00000517667 ZNF551Q7Z340 670 aaPredicted RBP10.06□□□□□ -0.8
TRAPPC9-203ENST00000517667 ZAR1Q86SH2 424 aa10.06□□□□□ -0.8
TRAPPC9-203ENST00000517667 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.06□□□□□ -0.8
TRAPPC9-203ENST00000517667 SLC16A11Q8NCK7 471 aa10.06□□□□□ -0.8
TRAPPC9-203ENST00000517667 ATP6V1C2Q8NEY4 427 aa10.06□□□□□ -0.8
TRAPPC9-203ENST00000517667 FBXO30Q8TB52 745 aa10.06□□□□□ -0.8
TRAPPC9-203ENST00000517667 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.06□□□□□ -0.8
TRAPPC9-203ENST00000517667 ZNF75CPQ92670 426 aaPredicted RBP10.06□□□□□ -0.8
TRAPPC9-203ENST00000517667 APH1AQ96BI3 265 aa10.06□□□□□ -0.8
TRAPPC9-203ENST00000517667 GIMAP5Q96F15 307 aa10.06□□□□□ -0.8
TRAPPC9-203ENST00000517667 ZNF764Q96H86 408 aaPredicted RBP10.06□□□□□ -0.8
TRAPPC9-203ENST00000517667 C1orf159Q96HA4 380 aa10.06□□□□□ -0.8
TRAPPC9-203ENST00000517667 KLHDC3Q9BQ90 382 aa10.06□□□□□ -0.8
TRAPPC9-203ENST00000517667 HOXD1Q9GZZ0 328 aa10.06□□□□□ -0.8
TRAPPC9-203ENST00000517667 ASB6Q9NWX5 421 aa10.06□□□□□ -0.8
TRAPPC9-203ENST00000517667 MALT1Q9UDY8 824 aa10.06□□□□□ -0.8
TRAPPC9-203ENST00000517667 ARFGEF3Q5TH69 2177 aa10.06□□□□□ -0.8
TRAPPC9-203ENST00000517667 IGKV3D-15A0A087WSY6 115 aa10.05□□□□□ -0.8
TRAPPC9-203ENST00000517667 A0A1W2PNR3 127 aa10.05□□□□□ -0.8
TRAPPC9-203ENST00000517667 C9JVG2 144 aa10.05□□□□□ -0.8
TRAPPC9-203ENST00000517667 IMPDH1P20839 514 aa10.05□□□□□ -0.8
TRAPPC9-203ENST00000517667 ATP6V1C1P21283 382 aa10.05□□□□□ -0.8
TRAPPC9-203ENST00000517667 PCMT1P22061 227 aa10.05□□□□□ -0.8
TRAPPC9-203ENST00000517667 CSNK2A1P68400 391 aaPredicted RBP10.05□□□□□ -0.8
TRAPPC9-203ENST00000517667 POU6F2P78424 691 aaPredicted RBP10.05□□□□□ -0.8
TRAPPC9-203ENST00000517667 SCGB2A2Q13296 93 aa10.05□□□□□ -0.8
TRAPPC9-203ENST00000517667 PDK3Q15120 406 aa10.05□□□□□ -0.8
TRAPPC9-203ENST00000517667 CARTPTQ16568 116 aa10.05□□□□□ -0.8
TRAPPC9-203ENST00000517667 SWI5Q1ZZU3 235 aa10.05□□□□□ -0.8
TRAPPC9-203ENST00000517667 UNC50Q53HI1 259 aa10.05□□□□□ -0.8
TRAPPC9-203ENST00000517667 SLC25A53Q5H9E4 307 aa10.05□□□□□ -0.8
TRAPPC9-203ENST00000517667 CBLN3Q6UW01 205 aa10.05□□□□□ -0.8
TRAPPC9-203ENST00000517667 UGT2A3Q6UWM9 527 aa10.05□□□□□ -0.8
TRAPPC9-203ENST00000517667 ZDHHC24Q6UX98 284 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms