RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 HDDC2Q7Z4H3 204 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 DCXRQ7Z4W1 244 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 ABHD12BQ7Z5M8 362 aaPredicted RBP3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 KMT5CQ86Y97 462 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 ZNF100Q8IYN0 542 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 PLPPR1Q8TBJ4 325 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 ACOT11Q8WXI4 607 aaPredicted RBP3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 NR4A3Q92570 626 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 DLX4Q92988 240 aaPredicted RBP3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 PPP1R14BQ96C90 147 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 ECHDC3Q96DC8 303 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 CXorf40BQ96DE9 158 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 SDSLQ96GA7 329 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 CPB2Q96IY4 423 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 RNF170Q96K19 258 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 CLCC1Q96S66 551 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 TMEM121Q9BTD3 319 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 ANGPTL4Q9BY76 406 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 POTEKPQ9BYX7 375 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 SAV1Q9H4B6 383 aaPredicted RBP3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 APOBEC3GQ9HC16 384 aaKnown RBP3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 ANKHQ9HCJ1 492 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 MRM2Q9UI43 246 aaKnown RBP3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 INSL6Q9Y581 213 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 PUS1Q9Y606 427 aaKnown RBP eCLIP3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 URGCP-MRPS24S4R325 110 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 LRPPRCP42704 1394 aaKnown RBP3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 A0A1W2PQ72 361 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 A0A1W2PRD5 423 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 CCDC182A6NF36 153 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 MGAT4DA6NG13 374 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 TMEM210A6NLX4 147 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 TCP10L2B9ZVM9 353 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 ANHXE9PGG2 379 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 LMO7DNF2Z398 122 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 F5H6K3 240 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 TFECO14948 347 aaPredicted RBP3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 PPIHO43447 177 aaKnown RBP3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 SNAI2O43623 268 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 SLC19A2O60779 497 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 HSBP1O75506 76 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 CDC123O75794 336 aaPredicted RBP3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 AP2A2O94973 939 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 FARS2O95363 451 aaKnown RBP3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 FGF19O95750 216 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 AP2A1O95782 977 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 RPN2P04844 631 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 STSP08842 583 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 RPSAP08865 295 aaKnown RBP3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 HBQ1P09105 142 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 OCMP0CE72 109 aaPredicted RBP3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 IGHV4-31P0DP07 118 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 MED14OSP0DP75 135 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 HOXB2P14652 356 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 ABOP16442 354 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 ZNF43P17038 809 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 ITGA2P17301 1181 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 POLR2EP19388 210 aaKnown RBP3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 GABRR2P28476 465 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 C21orf33P30042 268 aaPredicted RBP3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 HOXA9P31269 272 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 CX3CR1P49238 355 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 MRPL19P49406 292 aaKnown RBP3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 RARRES1P49788 294 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 HSPA2P54652 639 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 UCNP55089 124 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 GP2P55259 537 aaKnown RBP3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 TMEM50BP56557 158 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 MLF1P58340 268 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 DSTNP60981 165 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 B2MP61769 119 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 TUBA4AP68366 448 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 IL9RQ01113 521 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 SLAMF1Q13291 335 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 ZNF77Q15935 545 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 HAGHQ16775 308 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 MS4A18Q3C1V0 323 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 TMEM52BQ4KMG9 183 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 XKR6Q5GH73 641 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 SAMD4BQ5PRF9 694 aaKnown RBP3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 SUMO4Q6EEV6 95 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 MBOAT1Q6ZNC8 495 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 PLEKHG7Q6ZR37 379 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 ZNF621Q6ZSS3 439 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 APTXQ7Z2E3 356 aaKnown RBP3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 HSD11B1LQ7Z5J1 315 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 SLC26A11Q86WA9 606 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 SPAG16Q8N0X2 631 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 LINC01561Q8N1V8 128 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 PGBD5Q8N414 524 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 ARFGAP1Q8N6T3 406 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 ZSCAN4Q8NAM6 433 aaPredicted RBP3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 NEXN-AS1Q8NBZ9 246 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 KBTBD8Q8NFY9 601 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 OR2T12Q8NG77 320 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 IL17DQ8TAD2 202 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 C8orf46Q8TAG6 207 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 NUBPLQ8TB37 319 aa3.46□□□□□ -1.86
RNU4-60P-201ENST00000517239 UBA3Q8TBC4 463 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms