RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 ASPHQ12797 758 aa-1.26□□□□□ -2.61
RNU6-557P-201ENST00000516842 CETN1Q12798 172 aa-1.26□□□□□ -2.61
RNU6-557P-201ENST00000516842 CIRBPQ14011 172 aaKnown RBP-1.26□□□□□ -2.61
RNU6-557P-201ENST00000516842 MEF2DQ14814 521 aa-1.26□□□□□ -2.61
RNU6-557P-201ENST00000516842 SPHARQ15513 63 aa-1.26□□□□□ -2.61
RNU6-557P-201ENST00000516842 DEFB115Q30KQ5 88 aa-1.26□□□□□ -2.61
RNU6-557P-201ENST00000516842 TWISTNBQ3B726 338 aaPredicted RBP-1.26□□□□□ -2.61
RNU6-557P-201ENST00000516842 AGKQ53H12 422 aa-1.26□□□□□ -2.61
RNU6-557P-201ENST00000516842 XKR7Q5GH72 579 aa-1.26□□□□□ -2.61
RNU6-557P-201ENST00000516842 IL23RQ5VWK5 629 aa-1.26□□□□□ -2.61
RNU6-557P-201ENST00000516842 ZNF660Q6AZW8 331 aaPredicted RBP-1.26□□□□□ -2.61
RNU6-557P-201ENST00000516842 ATRAIDQ6UW56 229 aa-1.26□□□□□ -2.61
RNU6-557P-201ENST00000516842 TMPPEQ6ZT21 453 aa-1.26□□□□□ -2.61
RNU6-557P-201ENST00000516842 ARCQ7LC44 396 aa-1.26□□□□□ -2.61
RNU6-557P-201ENST00000516842 CENPVQ7Z7K6 275 aaPredicted RBP-1.26□□□□□ -2.61
RNU6-557P-201ENST00000516842 BIVMQ86UB2 503 aa-1.26□□□□□ -2.61
RNU6-557P-201ENST00000516842 SGPP2Q8IWX5 399 aa-1.26□□□□□ -2.61
RNU6-557P-201ENST00000516842 NKAPQ8N5F7 415 aaKnown RBP-1.26□□□□□ -2.61
RNU6-557P-201ENST00000516842 CCDC54Q8NEL0 328 aa-1.26□□□□□ -2.61
RNU6-557P-201ENST00000516842 NCOA7Q8NI08 942 aa-1.26□□□□□ -2.61
RNU6-557P-201ENST00000516842 AMDHD1Q96NU7 426 aa-1.26□□□□□ -2.61
RNU6-557P-201ENST00000516842 FERMT1Q9BQL6 677 aa-1.26□□□□□ -2.61
RNU6-557P-201ENST00000516842 SRXN1Q9BYN0 137 aa-1.26□□□□□ -2.61
RNU6-557P-201ENST00000516842 RAB34Q9BZG1 259 aa-1.26□□□□□ -2.61
RNU6-557P-201ENST00000516842 SMARCAD1Q9H4L7 1026 aa-1.26□□□□□ -2.61
RNU6-557P-201ENST00000516842 TAS2R1Q9NYW7 299 aa-1.26□□□□□ -2.61
RNU6-557P-201ENST00000516842 ZNF492Q9P255 531 aa-1.26□□□□□ -2.61
RNU6-557P-201ENST00000516842 SUCLA2Q9P2R7 463 aaPredicted RBP-1.26□□□□□ -2.61
RNU6-557P-201ENST00000516842 TUBGCP4Q9UGJ1 667 aa-1.26□□□□□ -2.61
RNU6-557P-201ENST00000516842 PCYOX1Q9UHG3 505 aa-1.26□□□□□ -2.61
RNU6-557P-201ENST00000516842 RIMS3Q9UJD0 308 aa-1.26□□□□□ -2.61
RNU6-557P-201ENST00000516842 C22orf24Q9Y442 160 aa-1.26□□□□□ -2.61
RNU6-557P-201ENST00000516842 KIF7Q2M1P5 1343 aa-1.26□□□□□ -2.61
RNU6-557P-201ENST00000516842 BRD4O60885 1362 aaPredicted RBP-1.26□□□□□ -2.61
RNU6-557P-201ENST00000516842 METP08581 1390 aa-1.26□□□□□ -2.61
RNU6-557P-201ENST00000516842 A0A0J9YVX5 310 aa-1.27□□□□□ -2.61
RNU6-557P-201ENST00000516842 IGHV5-10-1A0A0J9YXX1 117 aa-1.27□□□□□ -2.61
RNU6-557P-201ENST00000516842 BTNL10A8MVZ5 291 aa-1.27□□□□□ -2.61
RNU6-557P-201ENST00000516842 E9PBE3 544 aa-1.27□□□□□ -2.61
RNU6-557P-201ENST00000516842 FLRT2O43155 660 aa-1.27□□□□□ -2.61
RNU6-557P-201ENST00000516842 SYT7O43581 403 aa-1.27□□□□□ -2.61
RNU6-557P-201ENST00000516842 H6PDO95479 791 aa-1.27□□□□□ -2.61
RNU6-557P-201ENST00000516842 TSPAN13O95857 204 aa-1.27□□□□□ -2.61
RNU6-557P-201ENST00000516842 PYGLP06737 847 aa-1.27□□□□□ -2.61
RNU6-557P-201ENST00000516842 IGHV1-8P0DP01 117 aa-1.27□□□□□ -2.61
RNU6-557P-201ENST00000516842 XBP1P17861 261 aa-1.27□□□□□ -2.61
RNU6-557P-201ENST00000516842 ALOX12P18054 663 aa-1.27□□□□□ -2.61
RNU6-557P-201ENST00000516842 PSMB4P28070 264 aa-1.27□□□□□ -2.61
RNU6-557P-201ENST00000516842 GMPSP49915 693 aaPredicted RBP-1.27□□□□□ -2.61
RNU6-557P-201ENST00000516842 STAT2P52630 851 aa-1.27□□□□□ -2.61
RNU6-557P-201ENST00000516842 LIMK1P53667 647 aa-1.27□□□□□ -2.61
RNU6-557P-201ENST00000516842 KLF3P57682 345 aaPredicted RBP-1.27□□□□□ -2.61
RNU6-557P-201ENST00000516842 RPS6P62753 249 aaKnown RBP-1.27□□□□□ -2.61
RNU6-557P-201ENST00000516842 RBPJQ06330 500 aa-1.27□□□□□ -2.61
RNU6-557P-201ENST00000516842 DDX10Q13206 875 aaKnown RBP-1.27□□□□□ -2.61
RNU6-557P-201ENST00000516842 KLF5Q13887 457 aaPredicted RBP-1.27□□□□□ -2.61
RNU6-557P-201ENST00000516842 TEX44Q53QW1 395 aa-1.27□□□□□ -2.61
RNU6-557P-201ENST00000516842 ACSM5Q6NUN0 579 aa-1.27□□□□□ -2.61
RNU6-557P-201ENST00000516842 C11orf57Q6ZUT1 292 aaPredicted RBP-1.27□□□□□ -2.61
RNU6-557P-201ENST00000516842 CYP4V2Q6ZWL3 525 aaPredicted RBP-1.27□□□□□ -2.61
RNU6-557P-201ENST00000516842 TCF24Q7RTU0 167 aa-1.27□□□□□ -2.61
RNU6-557P-201ENST00000516842 CAMKMTQ7Z624 323 aa-1.27□□□□□ -2.61
RNU6-557P-201ENST00000516842 ANKRD18AQ8IVF6 992 aa-1.27□□□□□ -2.61
RNU6-557P-201ENST00000516842 C1orf131Q8NDD1 294 aaKnown RBP-1.27□□□□□ -2.61
RNU6-557P-201ENST00000516842 TSKUQ8WUA8 353 aa-1.27□□□□□ -2.61
RNU6-557P-201ENST00000516842 FAM46BQ96A09 425 aa-1.27□□□□□ -2.61
RNU6-557P-201ENST00000516842 DNAJC19Q96DA6 116 aa-1.27□□□□□ -2.61
RNU6-557P-201ENST00000516842 TMCO6Q96DC7 493 aa-1.27□□□□□ -2.61
RNU6-557P-201ENST00000516842 WDR34Q96EX3 536 aa-1.27□□□□□ -2.61
RNU6-557P-201ENST00000516842 CAMK2N2Q96S95 79 aa-1.27□□□□□ -2.61
RNU6-557P-201ENST00000516842 ZNF382Q96SR6 550 aa-1.27□□□□□ -2.61
RNU6-557P-201ENST00000516842 SSX3Q99909 188 aa-1.27□□□□□ -2.61
RNU6-557P-201ENST00000516842 FN3KQ9H479 309 aa-1.27□□□□□ -2.61
RNU6-557P-201ENST00000516842 SLCO1B3Q9NPD5 702 aa-1.27□□□□□ -2.61
RNU6-557P-201ENST00000516842 SEPT11Q9NVA2 429 aaKnown RBP-1.27□□□□□ -2.61
RNU6-557P-201ENST00000516842 RBM28Q9NW13 759 aaKnown RBP-1.27□□□□□ -2.61
RNU6-557P-201ENST00000516842 PAK1IP1Q9NWT1 392 aaPredicted RBP-1.27□□□□□ -2.61
RNU6-557P-201ENST00000516842 TREM2Q9NZC2 230 aa-1.27□□□□□ -2.61
RNU6-557P-201ENST00000516842 KIF25Q9UIL4 384 aa-1.27□□□□□ -2.61
RNU6-557P-201ENST00000516842 ADGRA3Q8IWK6 1321 aa-1.27□□□□□ -2.61
RNU6-557P-201ENST00000516842 FGD5Q6ZNL6 1462 aa-1.27□□□□□ -2.61
RNU6-557P-201ENST00000516842 HERC1Q15751 4861 aa-1.27□□□□□ -2.61
RNU6-557P-201ENST00000516842 COL1A1P02452 1464 aaPredicted RBP-1.28□□□□□ -2.61
RNU6-557P-201ENST00000516842 LOC100509620A0A075B734 347 aa-1.28□□□□□ -2.61
RNU6-557P-201ENST00000516842 NPIPA5A0A0B4J1W7 369 aa-1.28□□□□□ -2.61
RNU6-557P-201ENST00000516842 A0A1W2PQ09 198 aa-1.28□□□□□ -2.61
RNU6-557P-201ENST00000516842 SIGLEC16A6NMB1 481 aa-1.28□□□□□ -2.61
RNU6-557P-201ENST00000516842 NPIPA5E9PKD4 350 aa-1.28□□□□□ -2.61
RNU6-557P-201ENST00000516842 PDLIM1O00151 329 aa-1.28□□□□□ -2.61
RNU6-557P-201ENST00000516842 SH2D1BO14796 132 aa-1.28□□□□□ -2.61
RNU6-557P-201ENST00000516842 HLA-DQA1P01909 254 aa-1.28□□□□□ -2.61
RNU6-557P-201ENST00000516842 IGFBP1P08833 259 aaPredicted RBP-1.28□□□□□ -2.61
RNU6-557P-201ENST00000516842 ZNF735P0CB33 412 aa-1.28□□□□□ -2.61
RNU6-557P-201ENST00000516842 EEF1B2P24534 225 aaKnown RBP-1.28□□□□□ -2.61
RNU6-557P-201ENST00000516842 PSMA4P25789 261 aaKnown RBP-1.28□□□□□ -2.61
RNU6-557P-201ENST00000516842 SLC26A3P40879 764 aa-1.28□□□□□ -2.61
RNU6-557P-201ENST00000516842 ASMTP46597 345 aa-1.28□□□□□ -2.61
RNU6-557P-201ENST00000516842 CXCL12P48061 93 aa-1.28□□□□□ -2.61
RNU6-557P-201ENST00000516842 TPMTP51580 245 aa-1.28□□□□□ -2.61
RNU6-557P-201ENST00000516842 EIF2B1Q14232 305 aaKnown RBP-1.28□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms