RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 CNBD2Q96M20 576 aa7.59□□□□□ -1.19
CCL28-204ENST00000514421 GNRHR2Q96P88 292 aa7.59□□□□□ -1.19
CCL28-204ENST00000514421 EPYCQ99645 322 aa7.59□□□□□ -1.19
CCL28-204ENST00000514421 YIPF4Q9BSR8 244 aa7.59□□□□□ -1.19
CCL28-204ENST00000514421 G6PC3Q9BUM1 346 aa7.59□□□□□ -1.19
CCL28-204ENST00000514421 BTBD2Q9BX70 525 aa7.59□□□□□ -1.19
CCL28-204ENST00000514421 MRPS26Q9BYN8 205 aaKnown RBP7.59□□□□□ -1.19
CCL28-204ENST00000514421 ACKR4Q9NPB9 350 aa7.59□□□□□ -1.19
CCL28-204ENST00000514421 SDHAF3Q9NRP4 125 aa7.59□□□□□ -1.19
CCL28-204ENST00000514421 KLRF1Q9NZS2 232 aa7.59□□□□□ -1.19
CCL28-204ENST00000514421 B4GALT7Q9UBV7 327 aa7.59□□□□□ -1.19
CCL28-204ENST00000514421 TMEFF2Q9UIK5 374 aaPredicted RBP7.59□□□□□ -1.19
CCL28-204ENST00000514421 ZNF835Q9Y2P0 537 aa7.59□□□□□ -1.19
CCL28-204ENST00000514421 DNAJC13O75165 2243 aa7.59□□□□□ -1.19
CCL28-204ENST00000514421 DIDO1Q9BTC0 2240 aaKnown RBP7.59□□□□□ -1.19
CCL28-204ENST00000514421 GTF3C1Q12789 2109 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 ZNF407Q9C0G0 2248 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 A0A1B0GTH9 108 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 A0A1B0GUH1 482 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 A0A1B0GVC2 190 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 C2orf72A6NCS6 295 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 HMGN4O00479 90 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 GNB5O14775 395 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 SLC16A6O15403 523 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 SUSD5O60279 629 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 CDC40O60508 579 aaKnown RBP eCLIP7.58□□□□□ -1.2
CCL28-204ENST00000514421 HCN1O60741 890 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 TRAPPC6AO75865 159 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 PDE9AO76083 593 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 KCNK2O95069 426 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 UTS2O95399 124 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 SNAP29O95721 258 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 ZNF682O95780 498 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 IGKV1D-16P01601 117 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 IGHG3P01860 377 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 TFAP2AP05549 437 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 STSP08842 583 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 GNAO1P09471 354 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 LINGO3P0C6S8 592 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 RFPL3SP0C7P2 107 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 PABPC4LP0CB38 370 aaKnown RBP7.58□□□□□ -1.2
CCL28-204ENST00000514421 THRBP10828 461 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 FPR1P21462 350 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 DNAJA1P31689 397 aaKnown RBP7.58□□□□□ -1.2
CCL28-204ENST00000514421 PTGS2P35354 604 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 SOAT1P35610 550 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 CHI3L1P36222 383 aaPredicted RBP7.58□□□□□ -1.2
CCL28-204ENST00000514421 MAGEA5P43359 124 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 LIMS1P48059 325 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 RFX3P48380 749 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 MAN2A2P49641 1150 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 CASP6P55212 293 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 TUBA4AP68366 448 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 IL18R1Q13478 541 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.58□□□□□ -1.2
CCL28-204ENST00000514421 LRRC23Q53EV4 343 aaPredicted RBP7.58□□□□□ -1.2
CCL28-204ENST00000514421 FNDC7Q5VTL7 733 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 KDM4DQ6B0I6 523 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 ARHGAP11AQ6P4F7 1023 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 FAHD1Q6P587 224 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 ANGPTL8Q6UXH0 198 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 TRILQ7L0X0 811 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 VTCN1Q7Z7D3 282 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 STK32CQ86UX6 486 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 PLCZ1Q86YW0 608 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 ARMC8Q8IUR7 673 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 FAM26EQ8N5C1 309 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 COX18Q8N8Q8 333 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 WDSUB1Q8N9V3 476 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 OR1J4Q8NGS1 313 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 OR5AK3PQ8NH89 298 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 MAGEE2Q8TD90 523 aaPredicted RBP7.58□□□□□ -1.2
CCL28-204ENST00000514421 SLC38A5Q8WUX1 472 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 RNF138Q8WVD3 245 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 RELTQ969Z4 430 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 TAMM41Q96BW9 452 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 SDCCAG3Q96C92 435 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 RMND5BQ96G75 393 aaPredicted RBP7.58□□□□□ -1.2
CCL28-204ENST00000514421 OR7D2Q96RA2 312 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 ZNF347Q96SE7 839 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 MBOAT4Q96T53 435 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 HOXD1Q9GZZ0 328 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 SERHL2Q9H4I8 314 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 LDAHQ9H6V9 325 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 HHATLQ9HCP6 504 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 BCL2L10Q9HD36 194 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 VNN3Q9NY84 501 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 NDUFAF4Q9P032 175 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 NDUFA13Q9P0J0 144 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 ABCG2Q9UNQ0 655 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 ANGPT4Q9Y264 503 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 SLC5A6Q9Y289 635 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 V9GYQ6 96 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 LRRK2Q5S007 2527 aa7.58□□□□□ -1.2
CCL28-204ENST00000514421 SPTBN1Q01082 2364 aaKnown RBP7.57□□□□□ -1.2
CCL28-204ENST00000514421 PCNX1Q96RV3 2341 aa7.57□□□□□ -1.2
CCL28-204ENST00000514421 BAHCC1Q9P281 2608 aa7.57□□□□□ -1.2
CCL28-204ENST00000514421 FLNCQ14315 2725 aa7.57□□□□□ -1.2
CCL28-204ENST00000514421 TRGV5A0A0B4J1U4 118 aa7.57□□□□□ -1.2
CCL28-204ENST00000514421 TRGV8A0A0C4DH27 118 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms