RNA–Protein interactions for RNA: ENST00000513240.5

DDR1-271, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 2,882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-271ENST00000513240 HDAC8Q9BY41 377 aa13.65□□□□□ -0.22
DDR1-271ENST00000513240 REG4Q9BYZ8 158 aa13.65□□□□□ -0.22
DDR1-271ENST00000513240 TCEAL2Q9H3H9 227 aaPredicted RBP13.65□□□□□ -0.22
DDR1-271ENST00000513240 PELI2Q9HAT8 420 aa13.65□□□□□ -0.22
DDR1-271ENST00000513240 CLEC4AQ9UMR7 237 aa13.65□□□□□ -0.22
DDR1-271ENST00000513240 ZNF670-ZNF695F2Z2N8 137 aa13.65□□□□□ -0.22
DDR1-271ENST00000513240 FAAHO00519 579 aa13.65□□□□□ -0.22
DDR1-271ENST00000513240 HPGDSO60760 199 aa13.65□□□□□ -0.22
DDR1-271ENST00000513240 CTSVO60911 334 aa13.65□□□□□ -0.22
DDR1-271ENST00000513240 THY1P04216 161 aa13.65□□□□□ -0.22
DDR1-271ENST00000513240 RPN2P04844 631 aa13.65□□□□□ -0.22
DDR1-271ENST00000513240 MRPL3P09001 348 aaKnown RBP13.65□□□□□ -0.22
DDR1-271ENST00000513240 TGM3Q08188 693 aa13.65□□□□□ -0.22
DDR1-271ENST00000513240 IL18Q14116 193 aa13.65□□□□□ -0.22
DDR1-271ENST00000513240 CNIH2Q6PI25 160 aa13.65□□□□□ -0.22
DDR1-271ENST00000513240 MTSS1LQ765P7 747 aa13.65□□□□□ -0.22
DDR1-271ENST00000513240 DEFB119Q8N690 84 aa13.65□□□□□ -0.22
DDR1-271ENST00000513240 GAS2L1Q99501 681 aaPredicted RBP13.65□□□□□ -0.22
DDR1-271ENST00000513240 APOOQ9BUR5 198 aa13.65□□□□□ -0.22
DDR1-271ENST00000513240 CCDC86Q9H6F5 360 aaKnown RBP13.65□□□□□ -0.22
DDR1-271ENST00000513240 PLEKHB1Q9UF11 243 aaPredicted RBP13.65□□□□□ -0.22
DDR1-271ENST00000513240 MGAT4BQ9UQ53 548 aa13.65□□□□□ -0.22
DDR1-271ENST00000513240 SLC9A8Q9Y2E8 581 aa13.65□□□□□ -0.22
DDR1-271ENST00000513240 MAB21L2Q9Y586 359 aa13.65□□□□□ -0.22
DDR1-271ENST00000513240 A0A1W2PPK0 400 aa13.65□□□□□ -0.22
DDR1-271ENST00000513240 CDC42EP2O14613 210 aa13.65□□□□□ -0.22
DDR1-271ENST00000513240 GMFGO60234 142 aa13.65□□□□□ -0.22
DDR1-271ENST00000513240 CELA2BP08218 269 aaPredicted RBP13.65□□□□□ -0.22
DDR1-271ENST00000513240 TYRP1P17643 537 aa13.65□□□□□ -0.22
DDR1-271ENST00000513240 PSMA1P25786 263 aaKnown RBP13.65□□□□□ -0.22
DDR1-271ENST00000513240 MAPK9P45984 424 aa13.65□□□□□ -0.22
DDR1-271ENST00000513240 LBX1P52954 281 aa13.65□□□□□ -0.22
DDR1-271ENST00000513240 DSG2Q14126 1118 aa13.65□□□□□ -0.22
DDR1-271ENST00000513240 TMEM196Q5HYL7 178 aa13.65□□□□□ -0.22
DDR1-271ENST00000513240 CDCA4Q9BXL8 241 aa13.65□□□□□ -0.22
DDR1-271ENST00000513240 SLC38A1Q9H2H9 487 aa13.65□□□□□ -0.22
DDR1-271ENST00000513240 SLCO1C1Q9NYB5 712 aa13.65□□□□□ -0.22
DDR1-271ENST00000513240 HCN3Q9P1Z3 774 aa13.65□□□□□ -0.22
DDR1-271ENST00000513240 ADAM30Q9UKF2 790 aa13.65□□□□□ -0.22
DDR1-271ENST00000513240 LIPT1Q9Y234 373 aa13.65□□□□□ -0.22
DDR1-271ENST00000513240 ASCC3Q8N3C0 2202 aaKnown RBP13.64□□□□□ -0.23
DDR1-271ENST00000513240 A0A0B4J203 849 aa13.64□□□□□ -0.23
DDR1-271ENST00000513240 K7EQS6 105 aa13.64□□□□□ -0.23
DDR1-271ENST00000513240 PEX12O00623 359 aa13.64□□□□□ -0.23
DDR1-271ENST00000513240 RGS11O94810 467 aa13.64□□□□□ -0.23
DDR1-271ENST00000513240 APODP05090 189 aa13.64□□□□□ -0.23
DDR1-271ENST00000513240 GYPBP06028 91 aa13.64□□□□□ -0.23
DDR1-271ENST00000513240 CENPAP49450 140 aa13.64□□□□□ -0.23
DDR1-271ENST00000513240 RGS8P57771 180 aaPredicted RBP13.64□□□□□ -0.23
DDR1-271ENST00000513240 MAPK14Q16539 360 aa13.64□□□□□ -0.23
DDR1-271ENST00000513240 ENTPD8Q5MY95 495 aa13.64□□□□□ -0.23
DDR1-271ENST00000513240 FIP1L1Q6UN15 594 aaKnown RBP13.64□□□□□ -0.23
DDR1-271ENST00000513240 ZNF704Q6ZNC4 412 aaPredicted RBP13.64□□□□□ -0.23
DDR1-271ENST00000513240 MORN4Q8NDC4 146 aa13.64□□□□□ -0.23
DDR1-271ENST00000513240 SP7Q8TDD2 431 aaPredicted RBP13.64□□□□□ -0.23
DDR1-271ENST00000513240 ADAMTS15Q8TE58 950 aa13.64□□□□□ -0.23
DDR1-271ENST00000513240 ELP4Q96EB1 424 aa13.64□□□□□ -0.23
DDR1-271ENST00000513240 WSB2Q9NYS7 404 aaPredicted RBP13.64□□□□□ -0.23
DDR1-271ENST00000513240 DSPPQ9NZW4 1301 aa13.64□□□□□ -0.23
DDR1-271ENST00000513240 FAM74A7A6NL05 159 aa13.64□□□□□ -0.23
DDR1-271ENST00000513240 REM1O75628 298 aa13.64□□□□□ -0.23
DDR1-271ENST00000513240 HOXB6P17509 224 aaKnown RBP13.64□□□□□ -0.23
DDR1-271ENST00000513240 CSNK2A2P19784 350 aaPredicted RBP13.64□□□□□ -0.23
DDR1-271ENST00000513240 TRIM23P36406 574 aa13.64□□□□□ -0.23
DDR1-271ENST00000513240 FLI1Q01543 452 aaPredicted RBP13.64□□□□□ -0.23
DDR1-271ENST00000513240 HSF2Q03933 536 aa13.64□□□□□ -0.23
DDR1-271ENST00000513240 ERV3-1Q14264 604 aa13.64□□□□□ -0.23
DDR1-271ENST00000513240 EIF4HQ15056 248 aaKnown RBP13.64□□□□□ -0.23
DDR1-271ENST00000513240 FAM74A3Q4VXF1 159 aa13.64□□□□□ -0.23
DDR1-271ENST00000513240 HSD17B12Q53GQ0 312 aa13.64□□□□□ -0.23
DDR1-271ENST00000513240 PRRT3Q5FWE3 981 aa13.64□□□□□ -0.23
DDR1-271ENST00000513240 IL20RBQ6UXL0 311 aa13.64□□□□□ -0.23
DDR1-271ENST00000513240 VN1R4Q7Z5H5 301 aa13.64□□□□□ -0.23
DDR1-271ENST00000513240 CYB561A3Q8NBI2 242 aa13.64□□□□□ -0.23
DDR1-271ENST00000513240 CLRN3Q8NCR9 226 aa13.64□□□□□ -0.23
DDR1-271ENST00000513240 TMEM52Q8NDY8 209 aa13.64□□□□□ -0.23
DDR1-271ENST00000513240 OR4Q3Q8NH05 313 aa13.64□□□□□ -0.23
DDR1-271ENST00000513240 GRHL3Q8TE85 626 aa13.64□□□□□ -0.23
DDR1-271ENST00000513240 SLC25A46Q96AG3 418 aa13.64□□□□□ -0.23
DDR1-271ENST00000513240 ZC3HAV1LQ96H79 300 aaKnown RBP13.64□□□□□ -0.23
DDR1-271ENST00000513240 NELL2Q99435 816 aa13.64□□□□□ -0.23
DDR1-271ENST00000513240 FAIM2Q9BWQ8 316 aa13.64□□□□□ -0.23
DDR1-271ENST00000513240 TINAGL1Q9GZM7 467 aaPredicted RBP13.64□□□□□ -0.23
DDR1-271ENST00000513240 ESRP2Q9H6T0 727 aaKnown RBP13.64□□□□□ -0.23
DDR1-271ENST00000513240 COPZ2Q9P299 210 aa13.64□□□□□ -0.23
DDR1-271ENST00000513240 ZNF624Q9P2J8 865 aaPredicted RBP13.64□□□□□ -0.23
DDR1-271ENST00000513240 CDH10Q9Y6N8 788 aa13.64□□□□□ -0.23
DDR1-271ENST00000513240 DPM1O60762 260 aa13.63□□□□□ -0.23
DDR1-271ENST00000513240 LDOC1O95751 146 aaPredicted RBP13.63□□□□□ -0.23
DDR1-271ENST00000513240 LGI1O95970 557 aa13.63□□□□□ -0.23
DDR1-271ENST00000513240 HMGN1P05114 100 aa13.63□□□□□ -0.23
DDR1-271ENST00000513240 CLUP10909 449 aa13.63□□□□□ -0.23
DDR1-271ENST00000513240 CELP19835 753 aa13.63□□□□□ -0.23
DDR1-271ENST00000513240 CAPZA2P47755 286 aa13.63□□□□□ -0.23
DDR1-271ENST00000513240 HCCSP53701 268 aa13.63□□□□□ -0.23
DDR1-271ENST00000513240 IKZF1Q13422 519 aa13.63□□□□□ -0.23
DDR1-271ENST00000513240 RNASE12Q5GAN4 147 aaKnown RBP13.63□□□□□ -0.23
DDR1-271ENST00000513240 FAM27D1Q5T7N8 215 aa13.63□□□□□ -0.23
DDR1-271ENST00000513240 ASB18Q6ZVZ8 466 aa13.63□□□□□ -0.23
DDR1-271ENST00000513240 METTL27Q8N6F8 245 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms