RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 RBM24Q9BX46 236 aaKnown RBP3.53□□□□□ -1.84
HTT-210ENST00000512909 PINK1Q9BXM7 581 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 ZYG11BQ9C0D3 744 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 GANQ9H2C0 597 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 DHX35Q9H5Z1 703 aaKnown RBP3.53□□□□□ -1.84
HTT-210ENST00000512909 HAUS4Q9H6D7 363 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 MOB1AQ9H8S9 216 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 SGK2Q9HBY8 427 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 GDF3Q9NR23 364 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 ZNHIT6Q9NWK9 470 aaKnown RBP3.53□□□□□ -1.84
HTT-210ENST00000512909 GPATCH2LQ9NWQ4 482 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 IFNKQ9P0W0 207 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 PILRAQ9UKJ1 303 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 FOXA2Q9Y261 457 aaPredicted RBP3.53□□□□□ -1.84
HTT-210ENST00000512909 RNF215Q9Y6U7 377 aa3.53□□□□□ -1.84
HTT-210ENST00000512909 LAMA2P24043 3122 aaKnown RBP3.53□□□□□ -1.84
HTT-210ENST00000512909 TICRRQ7Z2Z1 1910 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 MYH15Q9Y2K3 1946 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 LAMA3Q16787 3333 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 A0A087X002 238 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 A0A0D9SEW6 157 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 TRBV2A0A0J9YWF9 115 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 ARHGAP42A6NI28 874 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 SIGLEC16A6NMB1 481 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 MPTX1A8MV57 137 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 A8MX80 341 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 LMO7DNF2Z398 122 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 DFFAO00273 331 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 SLC28A1O00337 649 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 ZBTB14O43829 449 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 PRPSAP2O60256 369 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 SORBS2O94875 1100 aaKnown RBP3.52□□□□□ -1.85
HTT-210ENST00000512909 ANGPTL1O95841 491 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 IGLV3-27P01718 113 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 TPM3P06753 285 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 NUDT17P0C025 328 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 CHRNA3P32297 505 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 VEGFCP49767 419 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 CRYBA2P53672 197 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 CCZ1BP86790 482 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 CCZ1P86791 482 aaPredicted RBP3.52□□□□□ -1.85
HTT-210ENST00000512909 GNA12Q03113 381 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 CALCOCO2Q13137 446 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 FASTKQ14296 549 aaKnown RBP3.52□□□□□ -1.85
HTT-210ENST00000512909 HNRNPA1L2Q32P51 320 aaKnown RBP3.52□□□□□ -1.85
HTT-210ENST00000512909 CARD16Q5EG05 197 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 CCDC122Q5T0U0 273 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 C9orf64Q5T6V5 341 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 CAPN13Q6MZZ7 669 aaPredicted RBP3.52□□□□□ -1.85
HTT-210ENST00000512909 GDPGP1Q6ZNW5 385 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 C17orf64Q86WR6 236 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 MCOLN2Q8IZK6 566 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 BATF2Q8N1L9 274 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 PYROXD2Q8N2H3 581 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 Q8NBF4 154 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 SIDT2Q8NBJ9 832 aaKnown RBP3.52□□□□□ -1.85
HTT-210ENST00000512909 OR6K2Q8NGY2 324 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 SPATA3Q8NHX4 192 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 C8orf46Q8TAG6 207 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 LIPHQ8WWY8 451 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 BCL2L2Q92843 193 aaPredicted RBP3.52□□□□□ -1.85
HTT-210ENST00000512909 BIRC7Q96CA5 298 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 TBC1D31Q96DN5 1066 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 MOCOSQ96EN8 888 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 C16orf58Q96GQ5 468 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 PDLIM5Q96HC4 596 aaKnown RBP3.52□□□□□ -1.85
HTT-210ENST00000512909 PRICKLE1Q96MT3 831 aaPredicted RBP3.52□□□□□ -1.85
HTT-210ENST00000512909 ZNF599Q96NL3 588 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 MCEEQ96PE7 176 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 ALKBH3Q96Q83 286 aaPredicted RBP3.52□□□□□ -1.85
HTT-210ENST00000512909 RUFY1Q96T51 708 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 S1PR3Q99500 378 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 ANP32EQ9BTT0 268 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 FUNDC2Q9BWH2 189 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 CALN1Q9BXU9 219 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 TSPYL1Q9H0U9 437 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 TMEM245Q9H330 911 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 TSPY26PQ9H489 355 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 ZDHHC6Q9H6R6 413 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 HOMER3Q9NSC5 361 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 ACOXLQ9NUZ1 547 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 PARVAQ9NVD7 372 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 DNAJC11Q9NVH1 559 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 UBQLN2Q9UHD9 624 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 PSORS1C1Q9UIG5 152 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 STOML2Q9UJZ1 356 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 SCML1Q9UN30 329 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 SLC9A8Q9Y2E8 581 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 KIF26BQ2KJY2 2108 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 ANK1P16157 1881 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 PDCD11Q14690 1871 aaKnown RBP3.52□□□□□ -1.85
HTT-210ENST00000512909 DENND4AQ7Z401 1863 aa3.52□□□□□ -1.85
HTT-210ENST00000512909 E9PQ18 207 aa3.51□□□□□ -1.85
HTT-210ENST00000512909 RNF103O00237 685 aa3.51□□□□□ -1.85
HTT-210ENST00000512909 CDX4O14627 284 aaPredicted RBP3.51□□□□□ -1.85
HTT-210ENST00000512909 MCF2LO15068 1137 aa3.51□□□□□ -1.85
HTT-210ENST00000512909 ZNF749O43361 778 aa3.51□□□□□ -1.85
HTT-210ENST00000512909 LDOC1O95751 146 aaPredicted RBP3.51□□□□□ -1.85
HTT-210ENST00000512909 PPP2R1BP30154 601 aa3.51□□□□□ -1.85
HTT-210ENST00000512909 CASP14P31944 242 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms