RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 GEMP55040 296 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 SRSF1Q07955 248 aaKnown RBP eCLIP5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 ARL6IP1Q15041 203 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 IMPG1Q17R60 797 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 COX19Q49B96 90 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 SFT2D3Q587I9 215 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 FAM71F2Q6NXP2 309 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 ZNF836Q6ZNA1 936 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 MON1BQ7L1V2 547 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 ACOT1Q86TX2 421 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 RANBP3LQ86VV4 465 aaPredicted RBP5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 HIPK1Q86Z02 1210 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 ACBD4Q8NC06 268 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 OR7G2Q8NG99 324 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 OR4K2Q8NGD2 314 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 OR5T2Q8NGG2 359 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 SORCS1Q8WY21 1168 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 NAT6Q93015 286 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 SMIM10Q96HG1 83 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 HOPXQ9BPY8 73 aaPredicted RBP5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 FUCA2Q9BTY2 467 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 CAB39LQ9H9S4 337 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 C1orf123Q9NWV4 160 aa5.7□□□□□ -1.5
TRAPPC11-209ENST00000512476 LRP5O75197 1615 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 ZNF609O15014 1411 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 COL24A1Q17RW2 1714 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 TRBV7-9A0A0J9YWB2 115 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 CXorf65A6NEN9 183 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 TMEM202A6NGA9 273 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 DYNC1I1O14576 645 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 CASKO14936 926 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 PCDH7O60245 1069 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 SLC19A2O60779 497 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 TGFB1P01137 390 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 C9P02748 559 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 TCRBP04435 133 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 ADH4P08319 380 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 AMPD1P23109 780 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 CD1CP29017 333 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 HTR5AP47898 357 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 IDH2P48735 452 aaKnown RBP5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 E2F1Q01094 437 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 MBTD1Q05BQ5 628 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 GABPAQ06546 454 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 PIGFQ07326 219 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 NFATC4Q14934 902 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 NDUFA5Q16718 116 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 GTDC1Q4AE62 458 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 H3F3CQ6NXT2 135 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 AADACL2Q6P093 401 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 CENPUQ71F23 418 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 LIMS2Q7Z4I7 341 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 CPEB2Q7Z5Q1 589 aaKnown RBP5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 DPPA2Q7Z7J5 298 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 SFR1Q86XK3 245 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 ERI1Q8IV48 349 aaKnown RBP5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 ARHGEF19Q8IW93 802 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 GPC2Q8N158 579 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 SYT14Q8NB59 555 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 CCDC112Q8NEF3 446 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 OR13C5Q8NGS8 318 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 OR14K1Q8NGZ2 314 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 WDR36Q8NI36 951 aaKnown RBP5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 PPP4R1Q8TF05 950 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 AKAP1Q92667 903 aaKnown RBP eCLIP5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 SLC30A2Q9BRI3 323 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 RSG1Q9BU20 258 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 IFT46Q9NQC8 304 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 C2orf42Q9NWW7 574 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 MIOXQ9UGB7 285 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 HYOU1Q9Y4L1 999 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 TIMM10BQ9Y5J6 103 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 MMP24Q9Y5R2 645 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 UBR3Q6ZT12 1888 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 GRID2IPA4D2P6 1211 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 FAM157AC9JC47 383 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 IFNW1P05000 195 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 CD63P08962 238 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 ENGP17813 658 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 LHCGRP22888 699 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 RGS6P49758 472 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 NKX2-5P52952 324 aaPredicted RBP5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 TPTEP56180 551 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 TMEM33P57088 247 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 PSPHP78330 225 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 PRR5P85299 388 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 ZNF844Q08AG5 666 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 KRT81Q14533 505 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 NR1D2Q14995 579 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 CYTH1Q15438 398 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 VAMP3Q15836 100 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 CDKN3Q16667 212 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 SYT14P1Q58G82 188 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 RALGPS2Q86X27 583 aaPredicted RBP5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 LAS2Q8IYD9 372 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 FAM109AQ8N4B1 249 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 OR2L5Q8NG80 312 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 RNASEH2CQ8TDP1 164 aaKnown RBP5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 SLC35F5Q8WV83 523 aa5.69□□□□□ -1.5
TRAPPC11-209ENST00000512476 TMEM170AQ8WVE7 144 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms