RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 OCLNQ16625 522 aa7.99□□□□□ -1.13
NUP54-211ENST00000512151 HIST2H2ACQ16777 129 aaPredicted RBP7.99□□□□□ -1.13
NUP54-211ENST00000512151 CT45A2Q5DJT8 189 aa7.99□□□□□ -1.13
NUP54-211ENST00000512151 ARL13AQ5H913 290 aaPredicted RBP7.99□□□□□ -1.13
NUP54-211ENST00000512151 TCHHL1Q5QJ38 904 aaPredicted RBP7.99□□□□□ -1.13
NUP54-211ENST00000512151 HIST2H2AA3Q6FI13 130 aa7.99□□□□□ -1.13
NUP54-211ENST00000512151 L3MBTL4Q8NA19 623 aa7.99□□□□□ -1.13
NUP54-211ENST00000512151 OR4N2Q8NGD1 307 aa7.99□□□□□ -1.13
NUP54-211ENST00000512151 OR4K14Q8NGD5 310 aa7.99□□□□□ -1.13
NUP54-211ENST00000512151 OR2V1Q8NHB1 315 aa7.99□□□□□ -1.13
NUP54-211ENST00000512151 HUS1BQ8NHY5 278 aa7.99□□□□□ -1.13
NUP54-211ENST00000512151 HPS1Q92902 700 aa7.99□□□□□ -1.13
NUP54-211ENST00000512151 SORT1Q99523 831 aa7.99□□□□□ -1.13
NUP54-211ENST00000512151 TRMOQ9BU70 441 aa7.99□□□□□ -1.13
NUP54-211ENST00000512151 C1QTNF5Q9BXJ0 243 aa7.99□□□□□ -1.13
NUP54-211ENST00000512151 KRTAP17-1Q9BYP8 105 aa7.99□□□□□ -1.13
NUP54-211ENST00000512151 DDX31Q9H8H2 851 aaKnown RBP7.99□□□□□ -1.13
NUP54-211ENST00000512151 UNKLQ9H9P5 680 aaKnown RBP7.99□□□□□ -1.13
NUP54-211ENST00000512151 PRM3Q9NNZ6 103 aa7.99□□□□□ -1.13
NUP54-211ENST00000512151 MID1IP1Q9NPA3 183 aa7.99□□□□□ -1.13
NUP54-211ENST00000512151 ZDHHC2Q9UIJ5 367 aa7.99□□□□□ -1.13
NUP54-211ENST00000512151 MGAT4BQ9UQ53 548 aa7.99□□□□□ -1.13
NUP54-211ENST00000512151 CFL2Q9Y281 166 aa7.99□□□□□ -1.13
NUP54-211ENST00000512151 RRP15Q9Y3B9 282 aaKnown RBP7.99□□□□□ -1.13
NUP54-211ENST00000512151 TIMM22Q9Y584 194 aa7.99□□□□□ -1.13
NUP54-211ENST00000512151 PTGDR2Q9Y5Y4 395 aa7.99□□□□□ -1.13
NUP54-211ENST00000512151 FKBP7Q9Y680 259 aa7.99□□□□□ -1.13
NUP54-211ENST00000512151 SNNO75324 88 aaPredicted RBP7.98□□□□□ -1.13
NUP54-211ENST00000512151 PGM3O95394 542 aa7.98□□□□□ -1.13
NUP54-211ENST00000512151 AVPP01185 164 aa7.98□□□□□ -1.13
NUP54-211ENST00000512151 NEFHP12036 1026 aa7.98□□□□□ -1.13
NUP54-211ENST00000512151 EPHA1P21709 976 aa7.98□□□□□ -1.13
NUP54-211ENST00000512151 DRD4P21917 467 aa7.98□□□□□ -1.13
NUP54-211ENST00000512151 IGHV1-2P23083 117 aa7.98□□□□□ -1.13
NUP54-211ENST00000512151 GIFP27352 417 aa7.98□□□□□ -1.13
NUP54-211ENST00000512151 SHC1P29353 583 aa7.98□□□□□ -1.13
NUP54-211ENST00000512151 SLC1A6P48664 564 aa7.98□□□□□ -1.13
NUP54-211ENST00000512151 CCNG1P51959 295 aa7.98□□□□□ -1.13
NUP54-211ENST00000512151 UBA52P62987 128 aaKnown RBP7.98□□□□□ -1.13
NUP54-211ENST00000512151 CHRNB3Q05901 458 aa7.98□□□□□ -1.13
NUP54-211ENST00000512151 FOXL1Q12952 345 aa7.98□□□□□ -1.13
NUP54-211ENST00000512151 LCP2Q13094 533 aa7.98□□□□□ -1.13
NUP54-211ENST00000512151 GLYR1Q49A26 553 aaPredicted RBP7.98□□□□□ -1.13
NUP54-211ENST00000512151 PAGE2BQ5JRK9 111 aa7.98□□□□□ -1.13
NUP54-211ENST00000512151 CFAP157Q5JU67 520 aa7.98□□□□□ -1.13
NUP54-211ENST00000512151 TMEM201Q5SNT2 666 aa7.98□□□□□ -1.13
NUP54-211ENST00000512151 TIMM23BQ5SRD1 257 aa7.98□□□□□ -1.13
NUP54-211ENST00000512151 C6orf163Q5TEZ5 329 aa7.98□□□□□ -1.13
NUP54-211ENST00000512151 LIPJQ5W064 366 aa7.98□□□□□ -1.13
NUP54-211ENST00000512151 GRHL2Q6ISB3 625 aa7.98□□□□□ -1.13
NUP54-211ENST00000512151 MED27Q6P2C8 311 aa7.98□□□□□ -1.13
NUP54-211ENST00000512151 TMEM108Q6UXF1 575 aa7.98□□□□□ -1.13
NUP54-211ENST00000512151 RNF128Q8TEB7 428 aa7.98□□□□□ -1.13
NUP54-211ENST00000512151 TAF15Q92804 592 aaKnown RBP eCLIP7.98□□□□□ -1.13
NUP54-211ENST00000512151 ATP6V1E2Q96A05 226 aa7.98□□□□□ -1.13
NUP54-211ENST00000512151 MUCL1Q96DR8 90 aa7.98□□□□□ -1.13
NUP54-211ENST00000512151 FBXO17Q96EF6 278 aa7.98□□□□□ -1.13
NUP54-211ENST00000512151 CHMP6Q96FZ7 201 aa7.98□□□□□ -1.13
NUP54-211ENST00000512151 MAGEB18Q96M61 343 aa7.98□□□□□ -1.13
NUP54-211ENST00000512151 ZNF317Q96PQ6 595 aaPredicted RBP7.98□□□□□ -1.13
NUP54-211ENST00000512151 ZNF382Q96SR6 550 aa7.98□□□□□ -1.13
NUP54-211ENST00000512151 MTERF1Q99551 399 aaKnown RBP7.98□□□□□ -1.13
NUP54-211ENST00000512151 SLC6A7Q99884 636 aa7.98□□□□□ -1.13
NUP54-211ENST00000512151 USB1Q9BQ65 265 aaKnown RBP7.98□□□□□ -1.13
NUP54-211ENST00000512151 KLHDC3Q9BQ90 382 aa7.98□□□□□ -1.13
NUP54-211ENST00000512151 INPP5KQ9BT40 448 aa7.98□□□□□ -1.13
NUP54-211ENST00000512151 SRXN1Q9BYN0 137 aa7.98□□□□□ -1.13
NUP54-211ENST00000512151 RABEP2Q9H5N1 569 aa7.98□□□□□ -1.13
NUP54-211ENST00000512151 TMEM185BQ9H7F4 350 aa7.98□□□□□ -1.13
NUP54-211ENST00000512151 WDR41Q9HAD4 459 aa7.98□□□□□ -1.13
NUP54-211ENST00000512151 FARSBQ9NSD9 589 aaKnown RBP7.98□□□□□ -1.13
NUP54-211ENST00000512151 PNPOQ9NVS9 261 aa7.98□□□□□ -1.13
NUP54-211ENST00000512151 KLHL13Q9P2N7 655 aa7.98□□□□□ -1.13
NUP54-211ENST00000512151 CES1P1Q9UKY3 287 aa7.98□□□□□ -1.13
NUP54-211ENST00000512151 USP22Q9UPT9 525 aa7.98□□□□□ -1.13
NUP54-211ENST00000512151 ATP23Q9Y6H3 246 aa7.98□□□□□ -1.13
NUP54-211ENST00000512151 OR5H1A6NKK0 313 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 TMEM114B3SHH9 223 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 TMEM233B4DJY2 109 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 KLF11O14901 512 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 UGDHO60701 494 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 ESRRBO95718 433 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 OTCP00480 354 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 COX5AP20674 150 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 PTAFRP25105 342 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 PSMA4P25789 261 aaKnown RBP7.97□□□□□ -1.13
NUP54-211ENST00000512151 IL12BP29460 328 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 FEN1P39748 380 aaKnown RBP7.97□□□□□ -1.13
NUP54-211ENST00000512151 HTR6P50406 440 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 PNLIPRP2P54317 469 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 PKNOX1P55347 436 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 MRPS35P82673 323 aaKnown RBP7.97□□□□□ -1.13
NUP54-211ENST00000512151 GALNT1Q10472 559 aaPredicted RBP7.97□□□□□ -1.13
NUP54-211ENST00000512151 ZNF239Q16600 458 aaKnown RBP7.97□□□□□ -1.13
NUP54-211ENST00000512151 CPSF6Q16630 551 aaKnown RBP eCLIP7.97□□□□□ -1.13
NUP54-211ENST00000512151 UGT3A2Q3SY77 523 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 GGTA1PQ4G0N0 100 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 HBMQ6B0K9 141 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 CLEC6AQ6EIG7 209 aa7.97□□□□□ -1.13
NUP54-211ENST00000512151 FAM180BQ6P0A1 224 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms