RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 ZNF385BQ569K4 471 aa16.66■□□□□ 0.26
HMGCS1-206ENST00000511774 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.66■□□□□ 0.26
HMGCS1-206ENST00000511774 BHLHB9Q6PI77 547 aa16.66■□□□□ 0.26
HMGCS1-206ENST00000511774 MISPQ8IVT2 679 aa16.66■□□□□ 0.26
HMGCS1-206ENST00000511774 ANKS4BQ8N8V4 417 aa16.66■□□□□ 0.26
HMGCS1-206ENST00000511774 WDR31Q8NA23 367 aa16.66■□□□□ 0.26
HMGCS1-206ENST00000511774 GPR119Q8TDV5 335 aa16.66■□□□□ 0.26
HMGCS1-206ENST00000511774 MRGPRX4Q96LA9 322 aa16.66■□□□□ 0.26
HMGCS1-206ENST00000511774 BPESC1Q9GZL8 116 aa16.66■□□□□ 0.26
HMGCS1-206ENST00000511774 NTMQ9P121 344 aa16.66■□□□□ 0.26
HMGCS1-206ENST00000511774 CARD8Q9Y2G2 431 aa16.66■□□□□ 0.26
HMGCS1-206ENST00000511774 NUP214P35658 2090 aaPredicted RBP16.66■□□□□ 0.26
HMGCS1-206ENST00000511774 ZNF724A8MTY0 619 aa16.65■□□□□ 0.26
HMGCS1-206ENST00000511774 SCDO00767 359 aa16.65■□□□□ 0.26
HMGCS1-206ENST00000511774 SUPT7LO94864 414 aa16.65■□□□□ 0.26
HMGCS1-206ENST00000511774 IFI6P09912 130 aa16.65■□□□□ 0.26
HMGCS1-206ENST00000511774 GSTM5P46439 218 aa16.65■□□□□ 0.26
HMGCS1-206ENST00000511774 CARTPTQ16568 116 aa16.65■□□□□ 0.26
HMGCS1-206ENST00000511774 TSNAXIP1Q2TAA8 658 aa16.65■□□□□ 0.26
HMGCS1-206ENST00000511774 ZNF100Q8IYN0 542 aa16.65■□□□□ 0.26
HMGCS1-206ENST00000511774 MMGT1Q8N4V1 131 aa16.65■□□□□ 0.26
HMGCS1-206ENST00000511774 CDRT4Q8N9R6 151 aa16.65■□□□□ 0.26
HMGCS1-206ENST00000511774 NUP43Q8NFH3 380 aa16.65■□□□□ 0.26
HMGCS1-206ENST00000511774 SEMA6DQ8NFY4 1073 aa16.65■□□□□ 0.26
HMGCS1-206ENST00000511774 OR6Y1Q8NGX8 325 aa16.65■□□□□ 0.26
HMGCS1-206ENST00000511774 PHOSPHO1Q8TCT1 267 aa16.65■□□□□ 0.26
HMGCS1-206ENST00000511774 FBXO17Q96EF6 278 aa16.65■□□□□ 0.26
HMGCS1-206ENST00000511774 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.65■□□□□ 0.269e-7■■□□□ 12.9
HMGCS1-206ENST00000511774 GJE1A6NN92 205 aa16.64■□□□□ 0.25
HMGCS1-206ENST00000511774 ATP6V1G2-DDX39BF2Z307 99 aa16.64■□□□□ 0.25
HMGCS1-206ENST00000511774 NDUFS8O00217 210 aa16.64■□□□□ 0.25
HMGCS1-206ENST00000511774 ITGA5P08648 1049 aa16.64■□□□□ 0.25
HMGCS1-206ENST00000511774 APOBEC3AP31941 199 aaPredicted RBP16.64■□□□□ 0.25
HMGCS1-206ENST00000511774 PAFAH1B1P43034 410 aa16.64■□□□□ 0.25
HMGCS1-206ENST00000511774 CHRNB3Q05901 458 aa16.64■□□□□ 0.25
HMGCS1-206ENST00000511774 C2orf54Q08AI8 447 aa16.64■□□□□ 0.25
HMGCS1-206ENST00000511774 GABRA6Q16445 453 aa16.64■□□□□ 0.25
HMGCS1-206ENST00000511774 SPDYAQ5MJ70 313 aa16.64■□□□□ 0.25
HMGCS1-206ENST00000511774 FBXW9Q5XUX1 488 aa16.64■□□□□ 0.25
HMGCS1-206ENST00000511774 KLHL17Q6TDP4 642 aa16.64■□□□□ 0.25
HMGCS1-206ENST00000511774 SSX8Q7RTT4 187 aa16.64■□□□□ 0.25
HMGCS1-206ENST00000511774 GALNT5Q7Z7M9 940 aa16.64■□□□□ 0.25
HMGCS1-206ENST00000511774 ACSS3Q9H6R3 686 aa16.64■□□□□ 0.25
HMGCS1-206ENST00000511774 GIN1Q9NXP7 522 aa16.64■□□□□ 0.25
HMGCS1-206ENST00000511774 NFU1Q9UMS0 254 aa16.64■□□□□ 0.25
HMGCS1-206ENST00000511774 ACTL7BQ9Y614 415 aa16.64■□□□□ 0.25
HMGCS1-206ENST00000511774 GPC6Q9Y625 555 aaPredicted RBP16.64■□□□□ 0.25
HMGCS1-206ENST00000511774 PMF1-BGLAPU3KQ54 211 aa16.64■□□□□ 0.25
HMGCS1-206ENST00000511774 CIB4A0PJX0 185 aa16.63■□□□□ 0.25
HMGCS1-206ENST00000511774 SERTM1A2A2V5 107 aa16.63■□□□□ 0.25
HMGCS1-206ENST00000511774 CCT8L1PA6NM43 557 aa16.63■□□□□ 0.25
HMGCS1-206ENST00000511774 ESPNB1AK53 854 aa16.63■□□□□ 0.25
HMGCS1-206ENST00000511774 KIF2AO00139 706 aaPredicted RBP16.63■□□□□ 0.25
HMGCS1-206ENST00000511774 SLU7O95391 586 aaKnown RBP16.63■□□□□ 0.25
HMGCS1-206ENST00000511774 NUDT14O95848 222 aa16.63■□□□□ 0.25
HMGCS1-206ENST00000511774 HPGDP15428 266 aa16.63■□□□□ 0.25
HMGCS1-206ENST00000511774 SLC7A1P30825 629 aa16.63■□□□□ 0.25
HMGCS1-206ENST00000511774 P2RX1P51575 399 aa16.63■□□□□ 0.25
HMGCS1-206ENST00000511774 SELENBP1Q13228 472 aa16.63■□□□□ 0.25
HMGCS1-206ENST00000511774 ZSWIM7Q19AV6 140 aa16.63■□□□□ 0.25
HMGCS1-206ENST00000511774 VPS26BQ4G0F5 336 aa16.63■□□□□ 0.25
HMGCS1-206ENST00000511774 IQCCQ4KMZ1 466 aa16.63■□□□□ 0.25
HMGCS1-206ENST00000511774 KLHL26Q53HC5 615 aa16.63■□□□□ 0.25
HMGCS1-206ENST00000511774 SLC25A53Q5H9E4 307 aa16.63■□□□□ 0.25
HMGCS1-206ENST00000511774 ABLIM2Q6H8Q1 611 aa16.63■□□□□ 0.25
HMGCS1-206ENST00000511774 MUS81Q96NY9 551 aa16.63■□□□□ 0.25
HMGCS1-206ENST00000511774 OR5B2Q96R09 309 aa16.63■□□□□ 0.25
HMGCS1-206ENST00000511774 QRSL1Q9H0R6 528 aaKnown RBP16.63■□□□□ 0.25
HMGCS1-206ENST00000511774 HHATLQ9HCP6 504 aa16.63■□□□□ 0.25
HMGCS1-206ENST00000511774 LOC390937A0A1W2PQ73 354 aa16.62■□□□□ 0.25
HMGCS1-206ENST00000511774 PDPK1O15530 556 aa16.62■□□□□ 0.25
HMGCS1-206ENST00000511774 ZSCAN12O43309 604 aa16.62■□□□□ 0.25
HMGCS1-206ENST00000511774 EFNA1P20827 205 aaPredicted RBP16.62■□□□□ 0.25
HMGCS1-206ENST00000511774 PHC1P78364 1004 aa16.62■□□□□ 0.25
HMGCS1-206ENST00000511774 TEX35Q5T0J7 233 aa16.62■□□□□ 0.25
HMGCS1-206ENST00000511774 LRIG3Q6UXM1 1119 aa16.62■□□□□ 0.25
HMGCS1-206ENST00000511774 SZRD1Q7Z422 152 aa16.62■□□□□ 0.25
HMGCS1-206ENST00000511774 UBE2J2Q8N2K1 259 aa16.62■□□□□ 0.25
HMGCS1-206ENST00000511774 COX18Q8N8Q8 333 aa16.62■□□□□ 0.25
HMGCS1-206ENST00000511774 MS4A4EQ96PG1 132 aa16.62■□□□□ 0.25
HMGCS1-206ENST00000511774 NAPGQ99747 312 aaPredicted RBP16.62■□□□□ 0.25
HMGCS1-206ENST00000511774 TRMOQ9BU70 441 aa16.62■□□□□ 0.25
HMGCS1-206ENST00000511774 KCNF1Q9H3M0 494 aa16.62■□□□□ 0.25
HMGCS1-206ENST00000511774 NINJ2Q9NZG7 142 aa16.62■□□□□ 0.25
HMGCS1-206ENST00000511774 TMEFF2Q9UIK5 374 aaPredicted RBP16.62■□□□□ 0.25
HMGCS1-206ENST00000511774 IGKV3D-15A0A087WSY6 115 aa16.61■□□□□ 0.25
HMGCS1-206ENST00000511774 ZNF716A6NP11 495 aa16.61■□□□□ 0.25
HMGCS1-206ENST00000511774 NPIPB8E9PQR5 432 aa16.61■□□□□ 0.25
HMGCS1-206ENST00000511774 PDLIM1O00151 329 aa16.61■□□□□ 0.25
HMGCS1-206ENST00000511774 ETV2O00321 342 aaPredicted RBP16.61■□□□□ 0.25
HMGCS1-206ENST00000511774 LCN1P31025 176 aa16.61■□□□□ 0.25
HMGCS1-206ENST00000511774 GPC1P35052 558 aa16.61■□□□□ 0.25
HMGCS1-206ENST00000511774 SRP14P37108 136 aaKnown RBP16.61■□□□□ 0.25
HMGCS1-206ENST00000511774 GNG11P61952 73 aa16.61■□□□□ 0.25
HMGCS1-206ENST00000511774 C9orf135Q5VTT2 229 aa16.61■□□□□ 0.25
HMGCS1-206ENST00000511774 NOXRED1Q6NXP6 359 aa16.61■□□□□ 0.25
HMGCS1-206ENST00000511774 SPATA4Q8NEY3 305 aa16.61■□□□□ 0.25
HMGCS1-206ENST00000511774 OR52E4Q8NGH9 312 aa16.61■□□□□ 0.25
HMGCS1-206ENST00000511774 CEP70Q8NHQ1 597 aa16.61■□□□□ 0.25
HMGCS1-206ENST00000511774 CDS1Q92903 461 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms