RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 KRTAP13-3Q3SY46 172 aa5.36□□□□□ -1.55
USP53-206ENST00000510737 BCL7AQ4VC05 210 aa5.36□□□□□ -1.55
USP53-206ENST00000510737 NDUFAF5Q5TEU4 345 aa5.36□□□□□ -1.55
USP53-206ENST00000510737 FIGLAQ6QHK4 219 aa5.36□□□□□ -1.55
USP53-206ENST00000510737 TMCO3Q6UWJ1 677 aa5.36□□□□□ -1.55
USP53-206ENST00000510737 FAM151BQ6UXP7 276 aa5.36□□□□□ -1.55
USP53-206ENST00000510737 SDCCAG8Q86SQ7 713 aaPredicted RBP5.36□□□□□ -1.55
USP53-206ENST00000510737 NT5DC3Q86UY8 548 aa5.36□□□□□ -1.55
USP53-206ENST00000510737 RPS19BP1Q86WX3 136 aaKnown RBP5.36□□□□□ -1.55
USP53-206ENST00000510737 MEX3DQ86XN8 651 aaKnown RBP5.36□□□□□ -1.55
USP53-206ENST00000510737 C2orf73Q8N5S3 287 aaPredicted RBP5.36□□□□□ -1.55
USP53-206ENST00000510737 ARIH2OSQ8N7S6 290 aa5.36□□□□□ -1.55
USP53-206ENST00000510737 OR2T12Q8NG77 320 aa5.36□□□□□ -1.55
USP53-206ENST00000510737 MMABQ96EY8 250 aaPredicted RBP5.36□□□□□ -1.55
USP53-206ENST00000510737 ZBED6CLQ96FA7 236 aaPredicted RBP5.36□□□□□ -1.55
USP53-206ENST00000510737 SLC47A1Q96FL8 570 aa5.36□□□□□ -1.55
USP53-206ENST00000510737 EGLN2Q96KS0 407 aa5.36□□□□□ -1.55
USP53-206ENST00000510737 UBXN10Q96LJ8 280 aa5.36□□□□□ -1.55
USP53-206ENST00000510737 GSDMAQ96QA5 445 aa5.36□□□□□ -1.55
USP53-206ENST00000510737 GOLPH3LQ9H4A5 285 aa5.36□□□□□ -1.55
USP53-206ENST00000510737 MAGIXQ9H6Y5 334 aa5.36□□□□□ -1.55
USP53-206ENST00000510737 ZDHHC11Q9H8X9 412 aa5.36□□□□□ -1.55
USP53-206ENST00000510737 SCPEP1Q9HB40 452 aa5.36□□□□□ -1.55
USP53-206ENST00000510737 DEPPQ9NTK1 212 aa5.36□□□□□ -1.55
USP53-206ENST00000510737 OR6C2Q9NZP2 312 aa5.36□□□□□ -1.55
USP53-206ENST00000510737 ZNF629Q9UEG4 869 aaPredicted RBP5.36□□□□□ -1.55
USP53-206ENST00000510737 PLAGL1Q9UM63 463 aa5.36□□□□□ -1.55
USP53-206ENST00000510737 KLF13Q9Y2Y9 288 aaPredicted RBP5.36□□□□□ -1.55
USP53-206ENST00000510737 LIPGQ9Y5X9 500 aa5.36□□□□□ -1.55
USP53-206ENST00000510737 USF3Q68DE3 2245 aa5.35□□□□□ -1.55
USP53-206ENST00000510737 FEZF1A0PJY2 475 aa5.35□□□□□ -1.55
USP53-206ENST00000510737 DEFB108AA8MXU0 73 aa5.35□□□□□ -1.55
USP53-206ENST00000510737 IFRD1O00458 451 aaPredicted RBP5.35□□□□□ -1.55
USP53-206ENST00000510737 CASKO14936 926 aa5.35□□□□□ -1.55
USP53-206ENST00000510737 TRMUO75648 421 aaKnown RBP5.35□□□□□ -1.55
USP53-206ENST00000510737 IGHG3P01860 377 aa5.35□□□□□ -1.55
USP53-206ENST00000510737 EIF2S1P05198 315 aaKnown RBP5.35□□□□□ -1.55
USP53-206ENST00000510737 MIPP30301 263 aa5.35□□□□□ -1.55
USP53-206ENST00000510737 ZNF136P52737 540 aa5.35□□□□□ -1.55
USP53-206ENST00000510737 MAT1AQ00266 395 aaKnown RBP5.35□□□□□ -1.55
USP53-206ENST00000510737 PTPRCAPQ14761 206 aa5.35□□□□□ -1.55
USP53-206ENST00000510737 PNLIPRP3Q17RR3 467 aa5.35□□□□□ -1.55
USP53-206ENST00000510737 C6orf52Q5T4I8 152 aa5.35□□□□□ -1.55
USP53-206ENST00000510737 KLHL10Q6JEL2 608 aa5.35□□□□□ -1.55
USP53-206ENST00000510737 ANKRD37Q7Z713 158 aa5.35□□□□□ -1.55
USP53-206ENST00000510737 PTOV1Q86YD1 416 aa5.35□□□□□ -1.55
USP53-206ENST00000510737 PHF13Q86YI8 300 aaPredicted RBP5.35□□□□□ -1.55
USP53-206ENST00000510737 LIX1Q8N485 282 aa5.35□□□□□ -1.55
USP53-206ENST00000510737 KIF2BQ8N4N8 673 aa5.35□□□□□ -1.55
USP53-206ENST00000510737 ZNF611Q8N823 705 aa5.35□□□□□ -1.55
USP53-206ENST00000510737 LINC01555Q8NAE3 123 aa5.35□□□□□ -1.55
USP53-206ENST00000510737 SLC22A8Q8TCC7 542 aa5.35□□□□□ -1.55
USP53-206ENST00000510737 NELFBQ8WX92 580 aa5.35□□□□□ -1.55
USP53-206ENST00000510737 METTL21AQ8WXB1 218 aa5.35□□□□□ -1.55
USP53-206ENST00000510737 CAPZA3Q96KX2 299 aa5.35□□□□□ -1.55
USP53-206ENST00000510737 CSPG4P5Q96PW8 444 aa5.35□□□□□ -1.55
USP53-206ENST00000510737 ZNF300Q96RE9 604 aaPredicted RBP5.35□□□□□ -1.55
USP53-206ENST00000510737 VN1R1Q9GZP7 353 aa5.35□□□□□ -1.55
USP53-206ENST00000510737 ASB8Q9H765 288 aa5.35□□□□□ -1.55
USP53-206ENST00000510737 COG4Q9H9E3 785 aa5.35□□□□□ -1.55
USP53-206ENST00000510737 C14orf105Q9NVL8 296 aa5.35□□□□□ -1.55
USP53-206ENST00000510737 MTRF1LQ9UGC7 380 aaKnown RBP5.35□□□□□ -1.55
USP53-206ENST00000510737 AMACRQ9UHK6 382 aa5.35□□□□□ -1.55
USP53-206ENST00000510737 EIF3LQ9Y262 564 aaKnown RBP5.35□□□□□ -1.55
USP53-206ENST00000510737 B3GALT5Q9Y2C3 310 aa5.35□□□□□ -1.55
USP53-206ENST00000510737 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.34□□□□□ -1.55
USP53-206ENST00000510737 ABCA1O95477 2261 aa5.34□□□□□ -1.55
USP53-206ENST00000510737 A0A0J9YVX5 310 aa5.34□□□□□ -1.55
USP53-206ENST00000510737 GLYATL1P3A0A0U1RQE8 302 aa5.34□□□□□ -1.55
USP53-206ENST00000510737 FAM166BA8MTA8 275 aa5.34□□□□□ -1.55
USP53-206ENST00000510737 PLPP2O43688 288 aa5.34□□□□□ -1.55
USP53-206ENST00000510737 SELLP14151 372 aa5.34□□□□□ -1.55
USP53-206ENST00000510737 TCF4P15884 667 aa5.34□□□□□ -1.55
USP53-206ENST00000510737 CCNCP24863 283 aa5.34□□□□□ -1.55
USP53-206ENST00000510737 ABCD3P28288 659 aa5.34□□□□□ -1.55
USP53-206ENST00000510737 ACADLP28330 430 aa5.34□□□□□ -1.55
USP53-206ENST00000510737 NKX2-1P43699 371 aaPredicted RBP5.34□□□□□ -1.55
USP53-206ENST00000510737 F2RL1P55085 397 aa5.34□□□□□ -1.55
USP53-206ENST00000510737 ATP5J2P56134 94 aa5.34□□□□□ -1.55
USP53-206ENST00000510737 MLF1P58340 268 aa5.34□□□□□ -1.55
USP53-206ENST00000510737 CD81P60033 236 aa5.34□□□□□ -1.55
USP53-206ENST00000510737 VAMP2P63027 116 aa5.34□□□□□ -1.55
USP53-206ENST00000510737 VEZF1Q14119 521 aa5.34□□□□□ -1.55
USP53-206ENST00000510737 EXT1Q16394 746 aa5.34□□□□□ -1.55
USP53-206ENST00000510737 LIPNQ5VXI9 398 aa5.34□□□□□ -1.55
USP53-206ENST00000510737 ATL3Q6DD88 541 aa5.34□□□□□ -1.55
USP53-206ENST00000510737 DNAJC24Q6P3W2 148 aa5.34□□□□□ -1.55
USP53-206ENST00000510737 ISCA2Q86U28 154 aa5.34□□□□□ -1.55
USP53-206ENST00000510737 ZNF677Q86XU0 584 aa5.34□□□□□ -1.55
USP53-206ENST00000510737 CREBRFQ8IUR6 639 aa5.34□□□□□ -1.55
USP53-206ENST00000510737 LRRC49Q8IUZ0 686 aa5.34□□□□□ -1.55
USP53-206ENST00000510737 PSTKQ8IV42 348 aaKnown RBP5.34□□□□□ -1.55
USP53-206ENST00000510737 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.34□□□□□ -1.55
USP53-206ENST00000510737 MRGPRDQ8TDS7 321 aa5.34□□□□□ -1.55
USP53-206ENST00000510737 ZNRF4Q8WWF5 429 aa5.34□□□□□ -1.55
USP53-206ENST00000510737 ZUFSPQ96AP4 578 aa5.34□□□□□ -1.55
USP53-206ENST00000510737 TADA1Q96BN2 335 aa5.34□□□□□ -1.55
USP53-206ENST00000510737 TSGA13Q96PP4 275 aa5.34□□□□□ -1.55
USP53-206ENST00000510737 PIGQQ9BRB3 760 aa5.34□□□□□ -1.55
USP53-206ENST00000510737 LAT2Q9GZY6 243 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms