RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 HSPB2Q16082 182 aa12.18□□□□□ -0.46
SNF8-206ENST00000509989 ZNF836Q6ZNA1 936 aa12.18□□□□□ -0.46
SNF8-206ENST00000509989 LRRC74BQ6ZQY2 392 aa12.18□□□□□ -0.46
SNF8-206ENST00000509989 GRAMD2AQ8IUY3 354 aa12.18□□□□□ -0.46
SNF8-206ENST00000509989 MISPQ8IVT2 679 aa12.18□□□□□ -0.46
SNF8-206ENST00000509989 LILRA2Q8N149 483 aa12.18□□□□□ -0.46
SNF8-206ENST00000509989 CLIP4Q8N3C7 705 aa12.18□□□□□ -0.46
SNF8-206ENST00000509989 OR5W2Q8NH69 310 aa12.18□□□□□ -0.46
SNF8-206ENST00000509989 OR10D3Q8NH80 312 aa12.18□□□□□ -0.46
SNF8-206ENST00000509989 STON2Q8WXE9 905 aa12.18□□□□□ -0.46
SNF8-206ENST00000509989 ZBTB8AQ96BR9 441 aa12.18□□□□□ -0.46
SNF8-206ENST00000509989 UCN2Q96RP3 112 aa12.18□□□□□ -0.46
SNF8-206ENST00000509989 TREX2Q9BQ50 279 aaPredicted RBP12.18□□□□□ -0.46
SNF8-206ENST00000509989 CCDC134Q9H6E4 229 aa12.18□□□□□ -0.46
SNF8-206ENST00000509989 COQ10BQ9H8M1 238 aa12.18□□□□□ -0.46
SNF8-206ENST00000509989 DNAJB12Q9NXW2 375 aaKnown RBP12.18□□□□□ -0.46
SNF8-206ENST00000509989 CLEC4AQ9UMR7 237 aa12.18□□□□□ -0.46
SNF8-206ENST00000509989 AP4B1Q9Y6B7 739 aa12.18□□□□□ -0.46
SNF8-206ENST00000509989 DSPPQ9NZW4 1301 aa12.17□□□□□ -0.46
SNF8-206ENST00000509989 POLQO75417 2590 aa12.17□□□□□ -0.46
SNF8-206ENST00000509989 A0A087WZY1 265 aa12.17□□□□□ -0.46
SNF8-206ENST00000509989 A0A1W2PNR3 127 aa12.17□□□□□ -0.46
SNF8-206ENST00000509989 A0A1W2PP18 115 aa12.17□□□□□ -0.46
SNF8-206ENST00000509989 SLC22A20A6NK97 555 aa12.17□□□□□ -0.46
SNF8-206ENST00000509989 EIF4E2O60573 245 aaKnown RBP12.17□□□□□ -0.46
SNF8-206ENST00000509989 RCBTB2O95199 551 aa12.17□□□□□ -0.46
SNF8-206ENST00000509989 AGR2O95994 175 aa12.17□□□□□ -0.46
SNF8-206ENST00000509989 GUSBP08236 651 aa12.17□□□□□ -0.46
SNF8-206ENST00000509989 GKN3PP0CG01 181 aa12.17□□□□□ -0.46
SNF8-206ENST00000509989 PRG2P13727 222 aa12.17□□□□□ -0.46
SNF8-206ENST00000509989 NID1P14543 1247 aa12.17□□□□□ -0.46
SNF8-206ENST00000509989 CTSSP25774 331 aa12.17□□□□□ -0.46
SNF8-206ENST00000509989 EIF1AXP47813 144 aaKnown RBP12.17□□□□□ -0.46
SNF8-206ENST00000509989 ARFIP2P53365 341 aa12.17□□□□□ -0.46
SNF8-206ENST00000509989 SIRPAP78324 504 aa12.17□□□□□ -0.46
SNF8-206ENST00000509989 LRRC74AQ0VAA2 488 aa12.17□□□□□ -0.46
SNF8-206ENST00000509989 CAPRIN1Q14444 709 aaKnown RBP12.17□□□□□ -0.46
SNF8-206ENST00000509989 HSP90B2PQ58FF3 399 aa12.17□□□□□ -0.46
SNF8-206ENST00000509989 MCEMP1Q8IX19 187 aa12.17□□□□□ -0.46
SNF8-206ENST00000509989 MEIOBQ8N635 442 aa12.17□□□□□ -0.46
SNF8-206ENST00000509989 METTL25Q8N6Q8 603 aa12.17□□□□□ -0.46
SNF8-206ENST00000509989 C10orf82Q8WW14 230 aa12.17□□□□□ -0.46
SNF8-206ENST00000509989 ROBO4Q8WZ75 1007 aa12.17□□□□□ -0.46
SNF8-206ENST00000509989 WNT2BQ93097 391 aa12.17□□□□□ -0.46
SNF8-206ENST00000509989 CPPED1Q9BRF8 314 aaPredicted RBP12.17□□□□□ -0.46
SNF8-206ENST00000509989 SLC39A3Q9BRY0 314 aa12.17□□□□□ -0.46
SNF8-206ENST00000509989 MED4Q9NPJ6 270 aa12.17□□□□□ -0.46
SNF8-206ENST00000509989 POLE3Q9NRF9 147 aa12.17□□□□□ -0.46
SNF8-206ENST00000509989 TACC2O95359 2948 aa12.16□□□□□ -0.46
SNF8-206ENST00000509989 IGHV3-15A0A0B4J1V0 119 aa12.16□□□□□ -0.46
SNF8-206ENST00000509989 A0A1W2PNV4 684 aa12.16□□□□□ -0.46
SNF8-206ENST00000509989 H3BNH8 94 aa12.16□□□□□ -0.46
SNF8-206ENST00000509989 ETV2O00321 342 aaPredicted RBP12.16□□□□□ -0.46
SNF8-206ENST00000509989 HNRNPRO43390 633 aaKnown RBP12.16□□□□□ -0.46
SNF8-206ENST00000509989 FRS3O43559 492 aa12.16□□□□□ -0.46
SNF8-206ENST00000509989 SOX30O94993 753 aa12.16□□□□□ -0.46
SNF8-206ENST00000509989 BMP2P12643 396 aa12.16□□□□□ -0.46
SNF8-206ENST00000509989 COX6B1P14854 86 aa12.16□□□□□ -0.46
SNF8-206ENST00000509989 KIR2DL2P43627 348 aaPredicted RBP12.16□□□□□ -0.46
SNF8-206ENST00000509989 SEC24CP53992 1094 aa12.16□□□□□ -0.46
SNF8-206ENST00000509989 RAC1P63000 192 aa12.16□□□□□ -0.46
SNF8-206ENST00000509989 HOXC5Q00444 222 aa12.16□□□□□ -0.46
SNF8-206ENST00000509989 ADRM1Q16186 407 aa12.16□□□□□ -0.46
SNF8-206ENST00000509989 TMEM176BQ3YBM2 270 aaPredicted RBP12.16□□□□□ -0.46
SNF8-206ENST00000509989 RUNDC3AQ59EK9 446 aa12.16□□□□□ -0.46
SNF8-206ENST00000509989 SLC25A53Q5H9E4 307 aa12.16□□□□□ -0.46
SNF8-206ENST00000509989 MRPL2Q5T653 305 aaKnown RBP12.16□□□□□ -0.46
SNF8-206ENST00000509989 PPP4R4Q6NUP7 873 aa12.16□□□□□ -0.46
SNF8-206ENST00000509989 EIF3MQ7L2H7 374 aaKnown RBP12.16□□□□□ -0.46
SNF8-206ENST00000509989 BTLAQ7Z6A9 289 aa12.16□□□□□ -0.46
SNF8-206ENST00000509989 LUZP2Q86TE4 346 aa12.16□□□□□ -0.46
SNF8-206ENST00000509989 ARFGAP2Q8N6H7 521 aa12.16□□□□□ -0.46
SNF8-206ENST00000509989 OR52P1PQ8NH57 321 aa12.16□□□□□ -0.46
SNF8-206ENST00000509989 NFKBIDQ8NI38 313 aa12.16□□□□□ -0.46
SNF8-206ENST00000509989 WDR60Q8WVS4 1066 aa12.16□□□□□ -0.46
SNF8-206ENST00000509989 STARD4Q96DR4 205 aa12.16□□□□□ -0.46
SNF8-206ENST00000509989 WFDC6Q9BQY6 131 aa12.16□□□□□ -0.46
SNF8-206ENST00000509989 CHST11Q9NPF2 352 aa12.16□□□□□ -0.46
SNF8-206ENST00000509989 SAR1AQ9NR31 198 aa12.16□□□□□ -0.46
SNF8-206ENST00000509989 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.16□□□□□ -0.46
SNF8-206ENST00000509989 JKAMPQ9P055 326 aa12.16□□□□□ -0.46
SNF8-206ENST00000509989 P2RX2Q9UBL9 471 aa12.16□□□□□ -0.46
SNF8-206ENST00000509989 USP22Q9UPT9 525 aa12.16□□□□□ -0.46
SNF8-206ENST00000509989 LIPT1Q9Y234 373 aa12.16□□□□□ -0.46
SNF8-206ENST00000509989 EEF1E1-BLOC1S5C9J1V9 151 aa12.15□□□□□ -0.46
SNF8-206ENST00000509989 ADAMDEC1O15204 470 aa12.15□□□□□ -0.46
SNF8-206ENST00000509989 EEF1E1O43324 174 aaKnown RBP12.15□□□□□ -0.46
SNF8-206ENST00000509989 ATP8B1O43520 1251 aa12.15□□□□□ -0.46
SNF8-206ENST00000509989 TPST1O60507 370 aa12.15□□□□□ -0.46
SNF8-206ENST00000509989 ARAFP10398 606 aa12.15□□□□□ -0.46
SNF8-206ENST00000509989 CCNA2P20248 432 aa12.15□□□□□ -0.46
SNF8-206ENST00000509989 UQCRC1P31930 480 aa12.15□□□□□ -0.46
SNF8-206ENST00000509989 SUMO3P55854 103 aaPredicted RBP12.15□□□□□ -0.46
SNF8-206ENST00000509989 MTPNP58546 118 aa12.15□□□□□ -0.46
SNF8-206ENST00000509989 EEF1A1P68104 462 aaKnown RBP12.15□□□□□ -0.46
SNF8-206ENST00000509989 HPCAP84074 193 aa12.15□□□□□ -0.46
SNF8-206ENST00000509989 KLF10Q13118 480 aa12.15□□□□□ -0.46
SNF8-206ENST00000509989 CBFBQ13951 182 aa12.15□□□□□ -0.46
SNF8-206ENST00000509989 GUSBP1Q15486 140 aa12.15□□□□□ -0.46
SNF8-206ENST00000509989 SLC25A35Q3KQZ1 300 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms