RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 C2orf92A0A1B0GVN3 265 aa13.4□□□□□ -0.26
DDX41-208ENST00000507955 A0A1W2PPC4 97 aa13.4□□□□□ -0.26
DDX41-208ENST00000507955 SHISA3A0PJX4 238 aa13.4□□□□□ -0.26
DDX41-208ENST00000507955 UNC119BA6NIH7 251 aa13.4□□□□□ -0.26
DDX41-208ENST00000507955 FOXS1O43638 330 aa13.4□□□□□ -0.26
DDX41-208ENST00000507955 ZNF24P17028 368 aa13.4□□□□□ -0.26
DDX41-208ENST00000507955 TBXA2RP21731 343 aa13.4□□□□□ -0.26
DDX41-208ENST00000507955 RPS4Y1P22090 263 aaKnown RBP13.4□□□□□ -0.26
DDX41-208ENST00000507955 NOS3P29474 1203 aa13.4□□□□□ -0.26
DDX41-208ENST00000507955 MAP3K8P41279 467 aa13.4□□□□□ -0.26
DDX41-208ENST00000507955 DAB2P98082 770 aa13.4□□□□□ -0.26
DDX41-208ENST00000507955 RUNX1T1Q06455 604 aa13.4□□□□□ -0.26
DDX41-208ENST00000507955 ZNF267Q14586 743 aaPredicted RBP13.4□□□□□ -0.26
DDX41-208ENST00000507955 TBRG1Q3YBR2 411 aa13.4□□□□□ -0.26
DDX41-208ENST00000507955 CXXC5Q7LFL8 322 aaKnown RBP13.4□□□□□ -0.26
DDX41-208ENST00000507955 KLBQ86Z14 1044 aa13.4□□□□□ -0.26
DDX41-208ENST00000507955 GJD3Q8N144 294 aa13.4□□□□□ -0.26
DDX41-208ENST00000507955 SPRYD4Q8WW59 207 aaPredicted RBP13.4□□□□□ -0.26
DDX41-208ENST00000507955 CLIP3Q96DZ5 547 aa13.4□□□□□ -0.26
DDX41-208ENST00000507955 ARHGAP9Q9BRR9 750 aa13.4□□□□□ -0.26
DDX41-208ENST00000507955 OR2B2Q9GZK3 357 aa13.4□□□□□ -0.26
DDX41-208ENST00000507955 SEMA6CQ9H3T2 930 aa13.4□□□□□ -0.26
DDX41-208ENST00000507955 TRPV5Q9NQA5 729 aa13.4□□□□□ -0.26
DDX41-208ENST00000507955 CLCA3PQ9Y6N3 262 aa13.4□□□□□ -0.26
DDX41-208ENST00000507955 MAU2Q9Y6X3 613 aa13.4□□□□□ -0.26
DDX41-208ENST00000507955 ALPK2Q86TB3 2170 aa13.4□□□□□ -0.26
DDX41-208ENST00000507955 A0A087WV62 115 aa13.4□□□□□ -0.26
DDX41-208ENST00000507955 TTC36A6NLP5 189 aa13.4□□□□□ -0.26
DDX41-208ENST00000507955 HRO43593 1189 aa13.4□□□□□ -0.26
DDX41-208ENST00000507955 CSF2P04141 144 aa13.4□□□□□ -0.26
DDX41-208ENST00000507955 THBS1P07996 1170 aa13.4□□□□□ -0.26
DDX41-208ENST00000507955 KCNAB1Q14722 419 aa13.4□□□□□ -0.26
DDX41-208ENST00000507955 GXYLT1Q4G148 440 aa13.4□□□□□ -0.26
DDX41-208ENST00000507955 EXOSC6Q5RKV6 272 aaKnown RBP13.4□□□□□ -0.26
DDX41-208ENST00000507955 ARHGEF39Q8N4T4 335 aa13.4□□□□□ -0.26
DDX41-208ENST00000507955 ZNF485Q8NCK3 441 aa13.4□□□□□ -0.26
DDX41-208ENST00000507955 BPIFA2Q96DR5 249 aa13.4□□□□□ -0.26
DDX41-208ENST00000507955 TTYH2Q9BSA4 534 aa13.4□□□□□ -0.26
DDX41-208ENST00000507955 OR51V1Q9H2C8 321 aa13.4□□□□□ -0.26
DDX41-208ENST00000507955 ANKRD19PQ9H560 264 aa13.4□□□□□ -0.26
DDX41-208ENST00000507955 THADAQ6YHU6 1953 aa13.4□□□□□ -0.27
DDX41-208ENST00000507955 HEATR5AQ86XA9 2040 aa13.39□□□□□ -0.27
DDX41-208ENST00000507955 SPAG17Q6Q759 2223 aa13.39□□□□□ -0.27
DDX41-208ENST00000507955 CD8B2A6NJW9 211 aa13.39□□□□□ -0.27
DDX41-208ENST00000507955 C10orf142B7Z368 130 aa13.39□□□□□ -0.27
DDX41-208ENST00000507955 IL1AP01583 271 aa13.39□□□□□ -0.27
DDX41-208ENST00000507955 CD8BP10966 210 aa13.39□□□□□ -0.27
DDX41-208ENST00000507955 DDOSTP39656 456 aa13.39□□□□□ -0.27
DDX41-208ENST00000507955 SLC9A3P48764 834 aa13.39□□□□□ -0.27
DDX41-208ENST00000507955 RAB38P57729 211 aa13.39□□□□□ -0.27
DDX41-208ENST00000507955 BNC1Q01954 994 aa13.39□□□□□ -0.27
DDX41-208ENST00000507955 STX4Q12846 297 aa13.39□□□□□ -0.27
DDX41-208ENST00000507955 EIPR1Q53HC9 387 aa13.39□□□□□ -0.27
DDX41-208ENST00000507955 PRAMEF17Q5VTA0 474 aa13.39□□□□□ -0.27
DDX41-208ENST00000507955 CADM2Q8N3J6 435 aa13.39□□□□□ -0.27
DDX41-208ENST00000507955 ARL14Q8N4G2 192 aa13.39□□□□□ -0.27
DDX41-208ENST00000507955 LMX1AQ8TE12 382 aa13.39□□□□□ -0.27
DDX41-208ENST00000507955 RIT1Q92963 219 aa13.39□□□□□ -0.27
DDX41-208ENST00000507955 RBM18Q96H35 190 aaKnown RBP13.39□□□□□ -0.27
DDX41-208ENST00000507955 CD180Q99467 661 aa13.39□□□□□ -0.27
DDX41-208ENST00000507955 KATNB1Q9BVA0 655 aa13.39□□□□□ -0.27
DDX41-208ENST00000507955 IFT27Q9BW83 186 aa13.39□□□□□ -0.27
DDX41-208ENST00000507955 BEX2Q9BXY8 128 aa13.39□□□□□ -0.27
DDX41-208ENST00000507955 MRPS18AQ9NVS2 196 aaKnown RBP13.39□□□□□ -0.27
DDX41-208ENST00000507955 H2AFY2Q9P0M6 372 aaPredicted RBP13.39□□□□□ -0.27
DDX41-208ENST00000507955 SIRT4Q9Y6E7 314 aaPredicted RBP13.39□□□□□ -0.27
DDX41-208ENST00000507955 TMEM129A0AVI4 362 aa13.39□□□□□ -0.27
DDX41-208ENST00000507955 PLA2G10O15496 165 aa13.39□□□□□ -0.27
DDX41-208ENST00000507955 CHRNB1P11230 501 aa13.39□□□□□ -0.27
DDX41-208ENST00000507955 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.39□□□□□ -0.271e-5■□□□□ 9.3
DDX41-208ENST00000507955 DEFB133Q30KQ1 61 aa13.39□□□□□ -0.27
DDX41-208ENST00000507955 PLK5Q496M5 336 aa13.39□□□□□ -0.27
DDX41-208ENST00000507955 ZFP69Q49AA0 526 aa13.39□□□□□ -0.27
DDX41-208ENST00000507955 NPSR1Q6W5P4 371 aa13.39□□□□□ -0.27
DDX41-208ENST00000507955 TMEM99Q8N816 258 aa13.39□□□□□ -0.27
DDX41-208ENST00000507955 RCBTB1Q8NDN9 531 aa13.39□□□□□ -0.27
DDX41-208ENST00000507955 PTP4A1Q93096 173 aa13.39□□□□□ -0.27
DDX41-208ENST00000507955 TGM7Q96PF1 710 aa13.39□□□□□ -0.27
DDX41-208ENST00000507955 FYTTD1Q96QD9 318 aaKnown RBP13.39□□□□□ -0.27
DDX41-208ENST00000507955 SMAD5Q99717 465 aaKnown RBP13.39□□□□□ -0.27
DDX41-208ENST00000507955 LMAN1LQ9HAT1 526 aa13.39□□□□□ -0.27
DDX41-208ENST00000507955 FOLH1BQ9HBA9 442 aa13.39□□□□□ -0.27
DDX41-208ENST00000507955 LRIT1Q9P2V4 623 aa13.39□□□□□ -0.27
DDX41-208ENST00000507955 NUFIP1Q9UHK0 495 aaKnown RBP13.39□□□□□ -0.27
DDX41-208ENST00000507955 FABP12A6NFH5 140 aa13.38□□□□□ -0.27
DDX41-208ENST00000507955 BHLHE40O14503 412 aa13.38□□□□□ -0.27
DDX41-208ENST00000507955 SLC35E2P0CK97 266 aa13.38□□□□□ -0.27
DDX41-208ENST00000507955 MYF5P13349 255 aa13.38□□□□□ -0.27
DDX41-208ENST00000507955 IL9P15248 144 aa13.38□□□□□ -0.27
DDX41-208ENST00000507955 HCCSP53701 268 aa13.38□□□□□ -0.27
DDX41-208ENST00000507955 RPS7P62081 194 aaKnown RBP13.38□□□□□ -0.27
DDX41-208ENST00000507955 ASAH1Q13510 395 aa13.38□□□□□ -0.27
DDX41-208ENST00000507955 NDUFA5Q16718 116 aa13.38□□□□□ -0.27
DDX41-208ENST00000507955 GLCCI1Q86VQ1 547 aa13.38□□□□□ -0.27
DDX41-208ENST00000507955 LRRC17Q8N6Y2 441 aa13.38□□□□□ -0.27
DDX41-208ENST00000507955 GATSQ8NAP1 163 aa13.38□□□□□ -0.27
DDX41-208ENST00000507955 UFD1Q92890 307 aa13.38□□□□□ -0.27
DDX41-208ENST00000507955 MMABQ96EY8 250 aaPredicted RBP13.38□□□□□ -0.27
DDX41-208ENST00000507955 DIRAS2Q96HU8 199 aa13.38□□□□□ -0.27
DDX41-208ENST00000507955 RNF170Q96K19 258 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms