RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 MFRPQ9BY79 579 aa15.88■□□□□ 0.13
SQSTM1-211ENST00000506690 NOX3Q9HBY0 568 aa15.88■□□□□ 0.13
SQSTM1-211ENST00000506690 CREBL2O60519 120 aaPredicted RBP15.88■□□□□ 0.13
SQSTM1-211ENST00000506690 SDC3O75056 442 aa15.88■□□□□ 0.13
SQSTM1-211ENST00000506690 REM1O75628 298 aa15.88■□□□□ 0.13
SQSTM1-211ENST00000506690 APOC3P02656 99 aa15.88■□□□□ 0.13
SQSTM1-211ENST00000506690 ATP1B1P05026 303 aa15.88■□□□□ 0.13
SQSTM1-211ENST00000506690 HOXB1P14653 301 aaPredicted RBP15.88■□□□□ 0.13
SQSTM1-211ENST00000506690 PRKAG1P54619 331 aa15.88■□□□□ 0.13
SQSTM1-211ENST00000506690 GK2Q14410 553 aaPredicted RBP15.88■□□□□ 0.13
SQSTM1-211ENST00000506690 LASP1Q14847 261 aaKnown RBP15.88■□□□□ 0.13
SQSTM1-211ENST00000506690 TXNDC8Q6A555 127 aa15.88■□□□□ 0.13
SQSTM1-211ENST00000506690 Q6ZVU0 165 aa15.88■□□□□ 0.13
SQSTM1-211ENST00000506690 NUDT13Q86X67 352 aa15.88■□□□□ 0.13
SQSTM1-211ENST00000506690 CMTM4Q8IZR5 234 aa15.88■□□□□ 0.13
SQSTM1-211ENST00000506690 KCT2Q8NC54 265 aa15.88■□□□□ 0.13
SQSTM1-211ENST00000506690 OR5T2Q8NGG2 359 aa15.88■□□□□ 0.13
SQSTM1-211ENST00000506690 OR5M9Q8NGP3 310 aa15.88■□□□□ 0.13
SQSTM1-211ENST00000506690 TMEM255BQ8WV15 326 aa15.88■□□□□ 0.13
SQSTM1-211ENST00000506690 SLC38A3Q99624 504 aa15.88■□□□□ 0.13
SQSTM1-211ENST00000506690 EXOSC3Q9NQT5 275 aaKnown RBP15.88■□□□□ 0.13
SQSTM1-211ENST00000506690 SLC13A4Q9UKG4 626 aa15.88■□□□□ 0.13
SQSTM1-211ENST00000506690 NTNG1Q9Y2I2 539 aa15.88■□□□□ 0.13
SQSTM1-211ENST00000506690 KCNE3Q9Y6H6 103 aa15.88■□□□□ 0.13
SQSTM1-211ENST00000506690 SNRPGP15A8MWD9 76 aa15.87■□□□□ 0.13
SQSTM1-211ENST00000506690 ARPC5O15511 151 aa15.87■□□□□ 0.13
SQSTM1-211ENST00000506690 FLRT2O43155 660 aa15.87■□□□□ 0.13
SQSTM1-211ENST00000506690 HMGN2P05204 90 aaKnown RBP15.87■□□□□ 0.13
SQSTM1-211ENST00000506690 ADRB1P08588 477 aa15.87■□□□□ 0.13
SQSTM1-211ENST00000506690 ANXA11P50995 505 aaKnown RBP15.87■□□□□ 0.13
SQSTM1-211ENST00000506690 MECP2P51608 486 aaKnown RBP15.87■□□□□ 0.13
SQSTM1-211ENST00000506690 APOOLQ6UXV4 268 aa15.87■□□□□ 0.13
SQSTM1-211ENST00000506690 NHLRC1Q6VVB1 395 aa15.87■□□□□ 0.13
SQSTM1-211ENST00000506690 LINGO2Q7L985 606 aa15.87■□□□□ 0.13
SQSTM1-211ENST00000506690 GDF7Q7Z4P5 450 aa15.87■□□□□ 0.13
SQSTM1-211ENST00000506690 MCATQ8IVS2 390 aaKnown RBP15.87■□□□□ 0.13
SQSTM1-211ENST00000506690 LGALS14Q8TCE9 139 aa15.87■□□□□ 0.13
SQSTM1-211ENST00000506690 BRIX1Q8TDN6 353 aaKnown RBP15.87■□□□□ 0.13
SQSTM1-211ENST00000506690 SLC38A1Q9H2H9 487 aa15.87■□□□□ 0.13
SQSTM1-211ENST00000506690 EVA1AQ9H8M9 152 aa15.87■□□□□ 0.13
SQSTM1-211ENST00000506690 SCPEP1Q9HB40 452 aa15.87■□□□□ 0.13
SQSTM1-211ENST00000506690 GABARAPH6UMI1 98 aa15.87■□□□□ 0.13
SQSTM1-211ENST00000506690 J3QLW9 94 aa15.87■□□□□ 0.13
SQSTM1-211ENST00000506690 HPP00738 406 aa15.87■□□□□ 0.13
SQSTM1-211ENST00000506690 PLATP00750 562 aa15.87■□□□□ 0.13
SQSTM1-211ENST00000506690 IL5P05113 134 aa15.87■□□□□ 0.13
SQSTM1-211ENST00000506690 ZNF19P17023 458 aa15.87■□□□□ 0.13
SQSTM1-211ENST00000506690 OR12D2P58182 307 aa15.87■□□□□ 0.13
SQSTM1-211ENST00000506690 AP3S2P59780 193 aa15.87■□□□□ 0.13
SQSTM1-211ENST00000506690 ZNF85Q03923 595 aa15.87■□□□□ 0.13
SQSTM1-211ENST00000506690 PABPC1L2AQ5JQF8 200 aa15.87■□□□□ 0.13
SQSTM1-211ENST00000506690 GSG1LQ6UXU4 331 aa15.87■□□□□ 0.13
SQSTM1-211ENST00000506690 TMEM64Q6YI46 380 aa15.87■□□□□ 0.13
SQSTM1-211ENST00000506690 OR52I2Q8NH67 350 aa15.87■□□□□ 0.13
SQSTM1-211ENST00000506690 IL17FQ96PD4 163 aa15.87■□□□□ 0.13
SQSTM1-211ENST00000506690 C1QTNF2Q9BXJ5 285 aa15.87■□□□□ 0.13
SQSTM1-211ENST00000506690 SAV1Q9H4B6 383 aaPredicted RBP15.87■□□□□ 0.13
SQSTM1-211ENST00000506690 EPHX3Q9H6B9 360 aa15.87■□□□□ 0.13
SQSTM1-211ENST00000506690 IFT22Q9H7X7 185 aa15.87■□□□□ 0.13
SQSTM1-211ENST00000506690 OR5K4A6NMS3 321 aa15.86■□□□□ 0.13
SQSTM1-211ENST00000506690 NCBP2P52298 156 aaKnown RBP eCLIP15.86■□□□□ 0.13
SQSTM1-211ENST00000506690 UBXN2BQ14CS0 331 aa15.86■□□□□ 0.13
SQSTM1-211ENST00000506690 OLFML2AQ68BL7 652 aa15.86■□□□□ 0.13
SQSTM1-211ENST00000506690 CDH26Q8IXH8 852 aa15.86■□□□□ 0.13
SQSTM1-211ENST00000506690 AMER3Q8N944 861 aa15.86■□□□□ 0.13
SQSTM1-211ENST00000506690 OR5J2Q8NH18 312 aa15.86■□□□□ 0.13
SQSTM1-211ENST00000506690 ZNF461Q8TAF7 563 aa15.86■□□□□ 0.13
SQSTM1-211ENST00000506690 GCDHQ92947 438 aaPredicted RBP15.86■□□□□ 0.13
SQSTM1-211ENST00000506690 PNPLA2Q96AD5 504 aa15.86■□□□□ 0.13
SQSTM1-211ENST00000506690 ARL6Q9H0F7 186 aa15.86■□□□□ 0.13
SQSTM1-211ENST00000506690 GPN1Q9HCN4 374 aaPredicted RBP15.86■□□□□ 0.13
SQSTM1-211ENST00000506690 LSM7Q9UK45 103 aaKnown RBP15.86■□□□□ 0.13
SQSTM1-211ENST00000506690 PCDHGA5Q9Y5G8 931 aa15.86■□□□□ 0.13
SQSTM1-211ENST00000506690 DENND4CQ5VZ89 1909 aa15.86■□□□□ 0.13
SQSTM1-211ENST00000506690 A0A1W2PPK0 400 aa15.86■□□□□ 0.13
SQSTM1-211ENST00000506690 CDHR4A6H8M9 788 aa15.86■□□□□ 0.13
SQSTM1-211ENST00000506690 ANKRD61A6NGH8 418 aa15.86■□□□□ 0.13
SQSTM1-211ENST00000506690 BHLHE40O14503 412 aa15.86■□□□□ 0.13
SQSTM1-211ENST00000506690 KIAA0355O15063 1070 aa15.86■□□□□ 0.13
SQSTM1-211ENST00000506690 LILRB5O75023 590 aa15.86■□□□□ 0.13
SQSTM1-211ENST00000506690 ABLIM3O94929 683 aa15.86■□□□□ 0.13
SQSTM1-211ENST00000506690 CBX7O95931 251 aa15.86■□□□□ 0.13
SQSTM1-211ENST00000506690 ANXA7P20073 488 aaKnown RBP15.86■□□□□ 0.13
SQSTM1-211ENST00000506690 NT5EP21589 574 aa15.86■□□□□ 0.13
SQSTM1-211ENST00000506690 MAT2AP31153 395 aaKnown RBP15.86■□□□□ 0.13
SQSTM1-211ENST00000506690 FXYD6P3P58550 94 aa15.86■□□□□ 0.13
SQSTM1-211ENST00000506690 TAS2R38P59533 333 aa15.86■□□□□ 0.13
SQSTM1-211ENST00000506690 GPNMBQ14956 572 aa15.86■□□□□ 0.13
SQSTM1-211ENST00000506690 ZNF660Q6AZW8 331 aaPredicted RBP15.86■□□□□ 0.13
SQSTM1-211ENST00000506690 C2orf73Q8N5S3 287 aaPredicted RBP15.86■□□□□ 0.13
SQSTM1-211ENST00000506690 EID2Q8N6I1 236 aa15.86■□□□□ 0.13
SQSTM1-211ENST00000506690 OR2A12Q8NGT7 310 aa15.86■□□□□ 0.13
SQSTM1-211ENST00000506690 SLC41A3Q96GZ6 507 aa15.86■□□□□ 0.13
SQSTM1-211ENST00000506690 TEAD3Q99594 435 aa15.86■□□□□ 0.13
SQSTM1-211ENST00000506690 OR52D1Q9H346 318 aa15.86■□□□□ 0.13
SQSTM1-211ENST00000506690 SLC35C2Q9NQQ7 365 aa15.86■□□□□ 0.13
SQSTM1-211ENST00000506690 MED11Q9P086 117 aa15.86■□□□□ 0.13
SQSTM1-211ENST00000506690 CPNE7Q9UBL6 633 aa15.86■□□□□ 0.13
SQSTM1-211ENST00000506690 OPN4Q9UHM6 478 aa15.86■□□□□ 0.13
SQSTM1-211ENST00000506690 ST6GALNAC2Q9UJ37 374 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms