RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 TRIB1Q96RU8 372 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 SH3GL1Q99961 368 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 THUMPD3Q9BV44 507 aaKnown RBP6.57□□□□□ -1.36
GYPB-206ENST00000506516 SLC38A1Q9H2H9 487 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 CLEC4MQ9H2X3 399 aaPredicted RBP6.57□□□□□ -1.36
GYPB-206ENST00000506516 ARMC7Q9H6L4 198 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 SAR1AQ9NR31 198 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 SERINC1Q9NRX5 453 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 MED17Q9NVC6 651 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 GID8Q9NWU2 228 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 VAPAQ9P0L0 249 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 SLAMF8Q9P0V8 285 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 KCNE5Q9UJ90 142 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 PRDM4Q9UKN5 801 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 ICAM5Q9UMF0 924 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 IFT52Q9Y366 437 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 ZNF337Q9Y3M9 751 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 GMEB1Q9Y692 573 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 A1L4Q6 167 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 C7orf72A4D263 438 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 AGAP5A6NIR3 686 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 CD8B2A6NJW9 211 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 HSPB2A8KAH6 182 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 BBIP1A8MTZ0 92 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 B4DXG7 233 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 H3BML4 177 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 CLDN14O95500 239 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 BCHEP06276 602 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 CHRM4P08173 479 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 LINGO3P0C6S8 592 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 UBTFL6P0CB48 400 aaPredicted RBP6.56□□□□□ -1.36
GYPB-206ENST00000506516 GLI4P10075 376 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 UQCRBP14927 111 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 ZNF708P17019 499 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 GPX2P18283 190 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 EPHA1P21709 976 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 ME2P23368 584 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 SLC6A2P23975 617 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 CHRNB4P30926 498 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 PGM1P36871 562 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 LHX2P50458 406 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 CCR4P51679 360 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 GYS2P54840 703 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 NUP107P57740 925 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 B3GALT5-AS1P59052 145 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 RPS3AP61247 264 aaKnown RBP6.56□□□□□ -1.36
GYPB-206ENST00000506516 RAC1P63000 192 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 EEF1A1P68104 462 aaKnown RBP6.56□□□□□ -1.36
GYPB-206ENST00000506516 ADORA2A-AS1P86434 159 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 FUT5Q11128 374 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 FGFBP1Q14512 234 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 LARS2Q15031 903 aaKnown RBP6.56□□□□□ -1.36
GYPB-206ENST00000506516 HSPB2Q16082 182 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 MAPK14Q16539 360 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 SGCBQ16585 318 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 TMEM44Q2T9K0 475 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 PLPPR5Q32ZL2 321 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 ACSF3Q4G176 576 aaPredicted RBP6.56□□□□□ -1.36
GYPB-206ENST00000506516 LIN52Q52LA3 116 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 COQ5Q5HYK3 327 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 RPS26P11Q5JNZ5 115 aaPredicted RBP6.56□□□□□ -1.36
GYPB-206ENST00000506516 PDSS1Q5T2R2 415 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 GCNT6Q5T4J0 391 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 RIPPLY2Q5TAB7 128 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 EEF1A1P5Q5VTE0 462 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 PRAMEF8Q5VWM4 474 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 PRAMEF7Q5VXH5 474 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 NSUN5P2Q63ZY6 315 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 RTL6Q6ICC9 239 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 CBLN3Q6UW01 205 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 DLEU7Q6UYE1 221 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 OLIG3Q7RTU3 272 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 MAMDC2Q7Z304 686 aaPredicted RBP6.56□□□□□ -1.36
GYPB-206ENST00000506516 P4HA3Q7Z4N8 544 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 KRT73Q86Y46 540 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 UBQLNLQ8IYU4 475 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 GTPBP8Q8N3Z3 284 aaPredicted RBP6.56□□□□□ -1.36
GYPB-206ENST00000506516 OR52P1PQ8NH57 321 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 RP9Q8TA86 221 aaKnown RBP6.56□□□□□ -1.36
GYPB-206ENST00000506516 ZNF563Q8TA94 476 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 BBS10Q8TAM1 723 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 GPR119Q8TDV5 335 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 WDR60Q8WVS4 1066 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 C10orf82Q8WW14 230 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 SMPDL3BQ92485 455 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 SDCCAG3Q96C92 435 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 ARSGQ96EG1 525 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 TMEM19Q96HH6 336 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 MRGPRX4Q96LA9 322 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 ANKRD27Q96NW4 1050 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 CGREF1Q99674 301 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 TM9SF2Q99805 663 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 TREX2Q9BQ50 279 aaPredicted RBP6.56□□□□□ -1.36
GYPB-206ENST00000506516 SPATA5L1Q9BVQ7 753 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 FAM107BQ9H098 131 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 TMEM38AQ9H6F2 299 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 BCL2L10Q9HD36 194 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 A4GALTQ9NPC4 353 aa6.56□□□□□ -1.36
GYPB-206ENST00000506516 CHST11Q9NPF2 352 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms