RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 CNTN2Q02246 1040 aa2.74□□□□□ -1.97
TOPBP1-204ENST00000505804 CKAP4Q07065 602 aaKnown RBP2.74□□□□□ -1.97
TOPBP1-204ENST00000505804 SLC10A7Q0GE19 358 aa2.74□□□□□ -1.97
TOPBP1-204ENST00000505804 PJVKQ0ZLH3 352 aa2.74□□□□□ -1.97
TOPBP1-204ENST00000505804 CCDC14Q49A88 953 aa2.74□□□□□ -1.97
TOPBP1-204ENST00000505804 LIPNQ5VXI9 398 aa2.74□□□□□ -1.97
TOPBP1-204ENST00000505804 ATL3Q6DD88 541 aa2.74□□□□□ -1.97
TOPBP1-204ENST00000505804 BLOC1S2Q6QNY1 142 aa2.74□□□□□ -1.97
TOPBP1-204ENST00000505804 C16orf62Q7Z3J2 963 aa2.74□□□□□ -1.97
TOPBP1-204ENST00000505804 FAM220AQ7Z4H9 259 aa2.74□□□□□ -1.97
TOPBP1-204ENST00000505804 SKA3Q8IX90 412 aa2.74□□□□□ -1.97
TOPBP1-204ENST00000505804 LRRC43Q8N309 656 aa2.74□□□□□ -1.97
TOPBP1-204ENST00000505804 OR51G2Q8NGK0 314 aa2.74□□□□□ -1.97
TOPBP1-204ENST00000505804 OR10T2Q8NGX3 314 aa2.74□□□□□ -1.97
TOPBP1-204ENST00000505804 PNPT1Q8TCS8 783 aaKnown RBP2.74□□□□□ -1.97
TOPBP1-204ENST00000505804 PAQR8Q8TEZ7 354 aa2.74□□□□□ -1.97
TOPBP1-204ENST00000505804 SLC5A11Q8WWX8 675 aa2.74□□□□□ -1.97
TOPBP1-204ENST00000505804 C16orf45Q96MC5 204 aaPredicted RBP2.74□□□□□ -1.97
TOPBP1-204ENST00000505804 C12orf66Q96MD2 445 aa2.74□□□□□ -1.97
TOPBP1-204ENST00000505804 PALMDQ9NP74 551 aa2.74□□□□□ -1.97
TOPBP1-204ENST00000505804 NANSQ9NR45 359 aa2.74□□□□□ -1.97
TOPBP1-204ENST00000505804 B3GNT2Q9NY97 397 aa2.74□□□□□ -1.97
TOPBP1-204ENST00000505804 CHRNA9Q9UGM1 479 aa2.74□□□□□ -1.97
TOPBP1-204ENST00000505804 SF3B1O75533 1304 aaKnown RBP eCLIP2.73□□□□□ -1.97
TOPBP1-204ENST00000505804 FRMPD3Q5JV73 1810 aa2.73□□□□□ -1.97
TOPBP1-204ENST00000505804 BICDL2A1A5D9 508 aa2.73□□□□□ -1.97
TOPBP1-204ENST00000505804 KRT13P13646 458 aa2.73□□□□□ -1.97
TOPBP1-204ENST00000505804 PGCP20142 388 aa2.73□□□□□ -1.97
TOPBP1-204ENST00000505804 CYP2B6P20813 491 aa2.73□□□□□ -1.97
TOPBP1-204ENST00000505804 NT5EP21589 574 aa2.73□□□□□ -1.97
TOPBP1-204ENST00000505804 WNT4P56705 351 aa2.73□□□□□ -1.97
TOPBP1-204ENST00000505804 PSG7Q13046 419 aa2.73□□□□□ -1.97
TOPBP1-204ENST00000505804 RABGAP1LQ5R372 815 aa2.73□□□□□ -1.97
TOPBP1-204ENST00000505804 IL34Q6ZMJ4 242 aa2.73□□□□□ -1.97
TOPBP1-204ENST00000505804 ACOT1Q86TX2 421 aa2.73□□□□□ -1.97
TOPBP1-204ENST00000505804 MTURNQ8N3F0 131 aa2.73□□□□□ -1.97
TOPBP1-204ENST00000505804 TMEM252Q8N6L7 170 aa2.73□□□□□ -1.97
TOPBP1-204ENST00000505804 KIR3DL3Q8N743 410 aa2.73□□□□□ -1.97
TOPBP1-204ENST00000505804 OR2AP1Q8NGE2 309 aa2.73□□□□□ -1.97
TOPBP1-204ENST00000505804 RNF138Q8WVD3 245 aa2.73□□□□□ -1.97
TOPBP1-204ENST00000505804 GNG12Q9UBI6 72 aa2.73□□□□□ -1.97
TOPBP1-204ENST00000505804 WARS2Q9UGM6 360 aaKnown RBP2.73□□□□□ -1.97
TOPBP1-204ENST00000505804 LAMP5Q9UJQ1 280 aa2.73□□□□□ -1.97
TOPBP1-204ENST00000505804 KIF3AQ9Y496 699 aa2.73□□□□□ -1.97
TOPBP1-204ENST00000505804 ALG6Q9Y672 507 aa2.73□□□□□ -1.97
TOPBP1-204ENST00000505804 MEGF6O75095 1541 aa2.73□□□□□ -1.97
TOPBP1-204ENST00000505804 IGHV2-70DA0A0C4DH43 119 aa2.72□□□□□ -1.97
TOPBP1-204ENST00000505804 A0A0J9YXY3 114 aa2.72□□□□□ -1.97
TOPBP1-204ENST00000505804 A0A1W2PNU3 283 aaPredicted RBP2.72□□□□□ -1.97
TOPBP1-204ENST00000505804 MSH4O15457 936 aa2.72□□□□□ -1.97
TOPBP1-204ENST00000505804 ZSCAN12O43309 604 aa2.72□□□□□ -1.97
TOPBP1-204ENST00000505804 ZNF861PO60384 105 aa2.72□□□□□ -1.97
TOPBP1-204ENST00000505804 HCN1O60741 890 aa2.72□□□□□ -1.97
TOPBP1-204ENST00000505804 UGT2B17O75795 530 aa2.72□□□□□ -1.97
TOPBP1-204ENST00000505804 BBOX1O75936 387 aa2.72□□□□□ -1.97
TOPBP1-204ENST00000505804 MFN2O95140 757 aa2.72□□□□□ -1.97
TOPBP1-204ENST00000505804 GNA14O95837 355 aa2.72□□□□□ -1.97
TOPBP1-204ENST00000505804 HPNP05981 417 aa2.72□□□□□ -1.97
TOPBP1-204ENST00000505804 EPB41P11171 864 aaKnown RBP2.72□□□□□ -1.97
TOPBP1-204ENST00000505804 RNH1P13489 461 aaKnown RBP2.72□□□□□ -1.97
TOPBP1-204ENST00000505804 DRD5P21918 477 aa2.72□□□□□ -1.97
TOPBP1-204ENST00000505804 NMT1P30419 496 aaKnown RBP2.72□□□□□ -1.97
TOPBP1-204ENST00000505804 CD80P33681 288 aa2.72□□□□□ -1.97
TOPBP1-204ENST00000505804 HPCAL1P37235 193 aa2.72□□□□□ -1.97
TOPBP1-204ENST00000505804 MXD4Q14582 209 aaPredicted RBP2.72□□□□□ -1.97
TOPBP1-204ENST00000505804 GGTA1PQ4G0N0 100 aa2.72□□□□□ -1.97
TOPBP1-204ENST00000505804 EOGTQ5NDL2 527 aa2.72□□□□□ -1.97
TOPBP1-204ENST00000505804 WDR74Q6RFH5 385 aaPredicted RBP2.72□□□□□ -1.97
TOPBP1-204ENST00000505804 NRMQ8IXM6 262 aa2.72□□□□□ -1.97
TOPBP1-204ENST00000505804 OR5L2Q8NGL0 311 aa2.72□□□□□ -1.97
TOPBP1-204ENST00000505804 OR9A1PQ8NGU1 263 aa2.72□□□□□ -1.97
TOPBP1-204ENST00000505804 C7orf33Q8WU49 177 aa2.72□□□□□ -1.97
TOPBP1-204ENST00000505804 SPRYD4Q8WW59 207 aaPredicted RBP2.72□□□□□ -1.97
TOPBP1-204ENST00000505804 DCUN1D4Q92564 292 aa2.72□□□□□ -1.97
TOPBP1-204ENST00000505804 OSTF1Q92882 214 aa2.72□□□□□ -1.97
TOPBP1-204ENST00000505804 RPL3LQ92901 407 aaKnown RBP2.72□□□□□ -1.97
TOPBP1-204ENST00000505804 TMEM117Q9H0C3 514 aa2.72□□□□□ -1.97
TOPBP1-204ENST00000505804 NXF5Q9H1B4 397 aaKnown RBP2.72□□□□□ -1.97
TOPBP1-204ENST00000505804 SLC35D1Q9NTN3 355 aa2.72□□□□□ -1.97
TOPBP1-204ENST00000505804 LCMT1Q9UIC8 334 aa2.72□□□□□ -1.97
TOPBP1-204ENST00000505804 NAP1L2Q9ULW6 460 aaPredicted RBP2.72□□□□□ -1.97
TOPBP1-204ENST00000505804 IFT52Q9Y366 437 aa2.72□□□□□ -1.97
TOPBP1-204ENST00000505804 RLFQ13129 1914 aa2.72□□□□□ -1.97
TOPBP1-204ENST00000505804 TTC21BQ7Z4L5 1316 aa2.71□□□□□ -1.98
TOPBP1-204ENST00000505804 A0A1B0GWJ7 208 aa2.71□□□□□ -1.98
TOPBP1-204ENST00000505804 USP27XA6NNY8 438 aa2.71□□□□□ -1.98
TOPBP1-204ENST00000505804 PPIAL4DF5H284 164 aa2.71□□□□□ -1.98
TOPBP1-204ENST00000505804 ABCD4O14678 606 aa2.71□□□□□ -1.98
TOPBP1-204ENST00000505804 ECI2O75521 394 aa2.71□□□□□ -1.98
TOPBP1-204ENST00000505804 SUPT7LO94864 414 aa2.71□□□□□ -1.98
TOPBP1-204ENST00000505804 SLITRK3O94933 977 aa2.71□□□□□ -1.98
TOPBP1-204ENST00000505804 LALBAP00709 142 aa2.71□□□□□ -1.98
TOPBP1-204ENST00000505804 MGMTP16455 207 aa2.71□□□□□ -1.98
TOPBP1-204ENST00000505804 UGT1A5P35504 534 aa2.71□□□□□ -1.98
TOPBP1-204ENST00000505804 HSPA2P54652 639 aa2.71□□□□□ -1.98
TOPBP1-204ENST00000505804 TIMM10P62072 90 aa2.71□□□□□ -1.98
TOPBP1-204ENST00000505804 TLE4Q04727 773 aa2.71□□□□□ -1.98
TOPBP1-204ENST00000505804 ZNF630Q2M218 657 aaPredicted RBP2.71□□□□□ -1.98
TOPBP1-204ENST00000505804 RIPPLY2Q5TAB7 128 aa2.71□□□□□ -1.98
TOPBP1-204ENST00000505804 ZNF530Q6P9A1 599 aaPredicted RBP2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms