RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 OR8D1Q8WZ84 308 aa11.02□□□□□ -0.65
UBE3D-206ENST00000505226 COL26A1Q96A83 441 aa11.02□□□□□ -0.65
UBE3D-206ENST00000505226 OMA1Q96E52 524 aa11.02□□□□□ -0.65
UBE3D-206ENST00000505226 KLHL28Q9NXS3 571 aa11.02□□□□□ -0.65
UBE3D-206ENST00000505226 KCNK6Q9Y257 313 aa11.02□□□□□ -0.65
UBE3D-206ENST00000505226 NPIPA5A0A0B4J1W7 369 aa11.02□□□□□ -0.65
UBE3D-206ENST00000505226 NPIPA7E9PJI5 369 aa11.02□□□□□ -0.65
UBE3D-206ENST00000505226 CDK2AP1O14519 115 aa11.02□□□□□ -0.65
UBE3D-206ENST00000505226 MT-ND5P03915 603 aa11.02□□□□□ -0.65
UBE3D-206ENST00000505226 RPN2P04844 631 aa11.02□□□□□ -0.65
UBE3D-206ENST00000505226 NPIPA8P0DM63 369 aa11.02□□□□□ -0.65
UBE3D-206ENST00000505226 MMP15P51511 669 aa11.02□□□□□ -0.65
UBE3D-206ENST00000505226 RPS7P62081 194 aaKnown RBP11.02□□□□□ -0.65
UBE3D-206ENST00000505226 PUDPQ08623 228 aa11.02□□□□□ -0.65
UBE3D-206ENST00000505226 SNTA1Q13424 505 aa11.02□□□□□ -0.65
UBE3D-206ENST00000505226 DUSP5Q16690 384 aa11.02□□□□□ -0.65
UBE3D-206ENST00000505226 DMKNQ6E0U4 476 aaPredicted RBP11.02□□□□□ -0.65
UBE3D-206ENST00000505226 MFSD12Q6NUT3 480 aa11.02□□□□□ -0.65
UBE3D-206ENST00000505226 GET4Q7L5D6 327 aaPredicted RBP11.02□□□□□ -0.65
UBE3D-206ENST00000505226 COMMD7Q86VX2 200 aa11.02□□□□□ -0.65
UBE3D-206ENST00000505226 BPHLQ86WA6 291 aaPredicted RBP11.02□□□□□ -0.65
UBE3D-206ENST00000505226 PIAS4Q8N2W9 510 aaPredicted RBP11.02□□□□□ -0.65
UBE3D-206ENST00000505226 ADAMTS15Q8TE58 950 aa11.02□□□□□ -0.65
UBE3D-206ENST00000505226 ADAMTS14Q8WXS8 1223 aa11.02□□□□□ -0.65
UBE3D-206ENST00000505226 ORAI1Q96D31 301 aa11.02□□□□□ -0.65
UBE3D-206ENST00000505226 HHIPL1Q96JK4 782 aa11.02□□□□□ -0.65
UBE3D-206ENST00000505226 C10orf90Q96M02 699 aa11.02□□□□□ -0.65
UBE3D-206ENST00000505226 HS6ST2Q96MM7 605 aa11.02□□□□□ -0.65
UBE3D-206ENST00000505226 NDC1Q9BTX1 674 aa11.02□□□□□ -0.65
UBE3D-206ENST00000505226 TRAV27A0A087WT01 109 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 GMDSO60547 372 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 SBK2P0C263 348 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 CEBPBP17676 345 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 PYCR1P32322 319 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 RAB28P51157 221 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 KLF9Q13886 244 aaPredicted RBP11.01□□□□□ -0.65
UBE3D-206ENST00000505226 GPR68Q15743 365 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 COL28A1Q2UY09 1125 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 SEZ6L2Q6UXD5 910 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 Q6ZTK2 550 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 TPRA1Q86W33 373 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 ZNF527Q8NB42 609 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 CXorf40AQ8TE69 158 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 MOAP1Q96BY2 351 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 MSANTD3Q96H12 275 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 TMEM168Q9H0V1 697 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 MRPS30Q9NP92 439 aaKnown RBP11.01□□□□□ -0.65
UBE3D-206ENST00000505226 ST6GALNAC2Q9UJ37 374 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 SYNDIG1LA6NDD5 238 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 TRABD2BA6NFA1 517 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 PRICKLE3O43900 615 aaPredicted RBP11.01□□□□□ -0.65
UBE3D-206ENST00000505226 HRGP04196 525 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 H2AFB2P0C5Z0 115 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 EPXP11678 715 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 RAB3BP20337 219 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 SLC2A5P22732 501 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 VIPR2P41587 438 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 PLAURQ03405 335 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 ELAVL3Q14576 367 aaKnown RBP11.01□□□□□ -0.65
UBE3D-206ENST00000505226 ZNF234Q14588 700 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 AANATQ16613 207 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 GAB4Q2WGN9 574 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 FAAH2Q6GMR7 532 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 GRASPQ7Z6J2 395 aaPredicted RBP11.01□□□□□ -0.65
UBE3D-206ENST00000505226 ETFBKMTQ8IXQ9 262 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 WDR89Q96FK6 387 aaPredicted RBP11.01□□□□□ -0.65
UBE3D-206ENST00000505226 DEFB118Q96PH6 123 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 CD180Q99467 661 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 C1QTNF6Q9BXI9 259 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 C1QTNF7Q9BXJ2 289 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 MTHFD2LQ9H903 347 aaPredicted RBP11.01□□□□□ -0.65
UBE3D-206ENST00000505226 NKIRAS2Q9NYR9 191 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 WDR45Q9Y484 360 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 A8MUA0 341 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 PEX12O00623 359 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 UBL3O95164 117 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 DNASE1P24855 282 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 BTN3A2P78410 334 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 SIM1P81133 766 aaPredicted RBP11.01□□□□□ -0.65
UBE3D-206ENST00000505226 CRMP1Q14194 572 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 ZNF267Q14586 743 aaPredicted RBP11.01□□□□□ -0.65
UBE3D-206ENST00000505226 STPG1Q5TH74 334 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 NLRC3Q7RTR2 1065 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 SMPDL3BQ92485 455 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 WBP1Q96G27 269 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 FN3KQ9H479 309 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 MEPEQ9NQ76 525 aaPredicted RBP11.01□□□□□ -0.65
UBE3D-206ENST00000505226 CMC2Q9NRP2 79 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 ANKRD10Q9NXR5 420 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 CALML5Q9NZT1 146 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 INSL6Q9Y581 213 aa11.01□□□□□ -0.65
UBE3D-206ENST00000505226 TEX51A0A1B0GUA7 166 aa11□□□□□ -0.65
UBE3D-206ENST00000505226 RNGTTO60942 597 aaKnown RBP11□□□□□ -0.65
UBE3D-206ENST00000505226 OR7A10O76100 309 aa11□□□□□ -0.65
UBE3D-206ENST00000505226 POLR2CP19387 275 aaPredicted RBP11□□□□□ -0.65
UBE3D-206ENST00000505226 DDX6P26196 483 aaKnown RBP eCLIP11□□□□□ -0.65
UBE3D-206ENST00000505226 RPS11P62280 158 aaKnown RBP eCLIP11□□□□□ -0.65
UBE3D-206ENST00000505226 OR1Q1Q15612 314 aa11□□□□□ -0.65
UBE3D-206ENST00000505226 GRK1Q15835 563 aa11□□□□□ -0.65
UBE3D-206ENST00000505226 PLPP4Q5VZY2 271 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms