RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 DMTNQ08495 405 aa9.11□□□□□ -0.95
NUP54-203ENST00000504173 SKP2Q13309 424 aa9.11□□□□□ -0.95
NUP54-203ENST00000504173 GANABQ14697 944 aaKnown RBP9.11□□□□□ -0.95
NUP54-203ENST00000504173 ZSWIM7Q19AV6 140 aa9.11□□□□□ -0.95
NUP54-203ENST00000504173 SPATS1Q496A3 300 aa9.11□□□□□ -0.95
NUP54-203ENST00000504173 EIPR1Q53HC9 387 aa9.11□□□□□ -0.95
NUP54-203ENST00000504173 RNF220Q5VTB9 566 aa9.11□□□□□ -0.95
NUP54-203ENST00000504173 DHRS4L2Q6PKH6 230 aa9.11□□□□□ -0.95
NUP54-203ENST00000504173 CBLN3Q6UW01 205 aa9.11□□□□□ -0.95
NUP54-203ENST00000504173 CCDC80Q76M96 950 aa9.11□□□□□ -0.95
NUP54-203ENST00000504173 SMYD1Q8NB12 490 aa9.11□□□□□ -0.95
NUP54-203ENST00000504173 FAM156AQ8NDB6 213 aa9.11□□□□□ -0.95
NUP54-203ENST00000504173 BHLHE22Q8NFJ8 381 aaPredicted RBP9.11□□□□□ -0.95
NUP54-203ENST00000504173 FAR1Q8WVX9 515 aa9.11□□□□□ -0.95
NUP54-203ENST00000504173 NR4A3Q92570 626 aa9.11□□□□□ -0.95
NUP54-203ENST00000504173 CNOT9Q92600 299 aaKnown RBP9.11□□□□□ -0.95
NUP54-203ENST00000504173 FAM162AQ96A26 154 aa9.11□□□□□ -0.95
NUP54-203ENST00000504173 TAMM41Q96BW9 452 aa9.11□□□□□ -0.95
NUP54-203ENST00000504173 SLC7A6OSQ96CW6 309 aaPredicted RBP9.11□□□□□ -0.95
NUP54-203ENST00000504173 C1GALT1C1Q96EU7 318 aa9.11□□□□□ -0.95
NUP54-203ENST00000504173 BTBD10Q9BSF8 475 aa9.11□□□□□ -0.95
NUP54-203ENST00000504173 THTPAQ9BU02 230 aa9.11□□□□□ -0.95
NUP54-203ENST00000504173 DEFB127Q9H1M4 99 aa9.11□□□□□ -0.95
NUP54-203ENST00000504173 UBQLN3Q9H347 655 aa9.11□□□□□ -0.95
NUP54-203ENST00000504173 ASF1BQ9NVP2 202 aa9.11□□□□□ -0.95
NUP54-203ENST00000504173 QPCTLQ9NXS2 382 aa9.11□□□□□ -0.95
NUP54-203ENST00000504173 CD300AQ9UGN4 299 aa9.11□□□□□ -0.95
NUP54-203ENST00000504173 EGFL7Q9UHF1 273 aa9.11□□□□□ -0.95
NUP54-203ENST00000504173 NPIPA1Q9UND3 350 aa9.11□□□□□ -0.95
NUP54-203ENST00000504173 CSPG4Q6UVK1 2322 aa9.11□□□□□ -0.95
NUP54-203ENST00000504173 FBN1P35555 2871 aaKnown RBP9.1□□□□□ -0.95
NUP54-203ENST00000504173 CDHR4A6H8M9 788 aa9.1□□□□□ -0.95
NUP54-203ENST00000504173 ANKUB1A6NFN9 424 aa9.1□□□□□ -0.95
NUP54-203ENST00000504173 B4DXG7 233 aa9.1□□□□□ -0.95
NUP54-203ENST00000504173 CDC40O60508 579 aaKnown RBP eCLIP9.1□□□□□ -0.95
NUP54-203ENST00000504173 BCAS1O75363 584 aaPredicted RBP9.1□□□□□ -0.95
NUP54-203ENST00000504173 GCM2O75603 506 aaPredicted RBP9.1□□□□□ -0.95
NUP54-203ENST00000504173 PDE5AO76074 875 aa9.1□□□□□ -0.95
NUP54-203ENST00000504173 MFN2O95140 757 aa9.1□□□□□ -0.95
NUP54-203ENST00000504173 C8BP07358 591 aa9.1□□□□□ -0.95
NUP54-203ENST00000504173 CELA3AP09093 270 aa9.1□□□□□ -0.95
NUP54-203ENST00000504173 NCK1P16333 377 aa9.1□□□□□ -0.95
NUP54-203ENST00000504173 TCEA1P23193 301 aaKnown RBP9.1□□□□□ -0.95
NUP54-203ENST00000504173 MST1P26927 711 aa9.1□□□□□ -0.95
NUP54-203ENST00000504173 DPP4P27487 766 aa9.1□□□□□ -0.95
NUP54-203ENST00000504173 KDELR2P33947 212 aa9.1□□□□□ -0.95
NUP54-203ENST00000504173 ZNF41P51814 821 aaPredicted RBP9.1□□□□□ -0.95
NUP54-203ENST00000504173 EEF1A1P68104 462 aaKnown RBP9.1□□□□□ -0.95
NUP54-203ENST00000504173 CBFBQ13951 182 aa9.1□□□□□ -0.95
NUP54-203ENST00000504173 CEACAM7Q14002 265 aa9.1□□□□□ -0.95
NUP54-203ENST00000504173 SLC10A1Q14973 349 aa9.1□□□□□ -0.95
NUP54-203ENST00000504173 GLYATQ6IB77 296 aa9.1□□□□□ -0.95
NUP54-203ENST00000504173 YRDCQ86U90 279 aaKnown RBP9.1□□□□□ -0.95
NUP54-203ENST00000504173 SIAH3Q8IW03 269 aa9.1□□□□□ -0.95
NUP54-203ENST00000504173 ZNF440Q8IYI8 595 aa9.1□□□□□ -0.95
NUP54-203ENST00000504173 CLIP4Q8N3C7 705 aa9.1□□□□□ -0.95
NUP54-203ENST00000504173 FAM71CQ8NEG0 241 aa9.1□□□□□ -0.95
NUP54-203ENST00000504173 FAM83FQ8NEG4 500 aaPredicted RBP9.1□□□□□ -0.95
NUP54-203ENST00000504173 TOR1AIP2Q8NFQ8 470 aa9.1□□□□□ -0.95
NUP54-203ENST00000504173 OR5W2Q8NH69 310 aa9.1□□□□□ -0.95
NUP54-203ENST00000504173 OR14L1PQ8NHC6 308 aa9.1□□□□□ -0.95
NUP54-203ENST00000504173 RASSF5Q8WWW0 418 aa9.1□□□□□ -0.95
NUP54-203ENST00000504173 GPR137Q96N19 417 aa9.1□□□□□ -0.95
NUP54-203ENST00000504173 TMUB1Q9BVT8 246 aa9.1□□□□□ -0.95
NUP54-203ENST00000504173 PINK1Q9BXM7 581 aa9.1□□□□□ -0.95
NUP54-203ENST00000504173 OR2B2Q9GZK3 357 aa9.1□□□□□ -0.95
NUP54-203ENST00000504173 LDAHQ9H6V9 325 aa9.1□□□□□ -0.95
NUP54-203ENST00000504173 EXO5Q9H790 373 aa9.1□□□□□ -0.95
NUP54-203ENST00000504173 ZDHHC11Q9H8X9 412 aa9.1□□□□□ -0.95
NUP54-203ENST00000504173 EXOSC3Q9NQT5 275 aaKnown RBP9.1□□□□□ -0.95
NUP54-203ENST00000504173 RLIMQ9NVW2 624 aa9.1□□□□□ -0.95
NUP54-203ENST00000504173 KLHL28Q9NXS3 571 aa9.1□□□□□ -0.95
NUP54-203ENST00000504173 DNAJB12Q9NXW2 375 aaKnown RBP9.1□□□□□ -0.95
NUP54-203ENST00000504173 MAGEL2Q9UJ55 1249 aa9.1□□□□□ -0.95
NUP54-203ENST00000504173 ICAM5Q9UMF0 924 aa9.1□□□□□ -0.95
NUP54-203ENST00000504173 SNX13Q9Y5W8 968 aa9.1□□□□□ -0.95
NUP54-203ENST00000504173 DIDO1Q9BTC0 2240 aaKnown RBP9.1□□□□□ -0.95
NUP54-203ENST00000504173 PKDREJQ9NTG1 2253 aa9.1□□□□□ -0.95
NUP54-203ENST00000504173 A0A087WZY1 265 aa9.09□□□□□ -0.95
NUP54-203ENST00000504173 TRGV5A0A0B4J1U4 118 aa9.09□□□□□ -0.95
NUP54-203ENST00000504173 CFAP73A6NFT4 308 aa9.09□□□□□ -0.95
NUP54-203ENST00000504173 PRSS44E7EML9 344 aa9.09□□□□□ -0.95
NUP54-203ENST00000504173 TPST1O60507 370 aa9.09□□□□□ -0.95
NUP54-203ENST00000504173 DNAJC8O75937 253 aaPredicted RBP9.09□□□□□ -0.95
NUP54-203ENST00000504173 HPNP05981 417 aa9.09□□□□□ -0.95
NUP54-203ENST00000504173 GKN3PP0CG01 181 aa9.09□□□□□ -0.95
NUP54-203ENST00000504173 UQCRBP14927 111 aa9.09□□□□□ -0.95
NUP54-203ENST00000504173 HK1P19367 917 aa9.09□□□□□ -0.95
NUP54-203ENST00000504173 PGCP20142 388 aa9.09□□□□□ -0.95
NUP54-203ENST00000504173 ME2P23368 584 aa9.09□□□□□ -0.95
NUP54-203ENST00000504173 RYKP34925 604 aa9.09□□□□□ -0.95
NUP54-203ENST00000504173 MSX2P35548 267 aaPredicted RBP9.09□□□□□ -0.95
NUP54-203ENST00000504173 GCKP35557 465 aa9.09□□□□□ -0.95
NUP54-203ENST00000504173 SLC6A8P48029 635 aa9.09□□□□□ -0.95
NUP54-203ENST00000504173 KCNJ5P48544 419 aa9.09□□□□□ -0.95
NUP54-203ENST00000504173 CRYBA2P53672 197 aa9.09□□□□□ -0.95
NUP54-203ENST00000504173 PER3P56645 1201 aa9.09□□□□□ -0.95
NUP54-203ENST00000504173 NCALDP61601 193 aa9.09□□□□□ -0.95
NUP54-203ENST00000504173 PLAURQ03405 335 aa9.09□□□□□ -0.95
NUP54-203ENST00000504173 BNIP2Q12982 314 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms