RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 GLIPR1L2Q4G1C9 344 aa14.91□□□□□ -0.02
SCLT1-205ENST00000503401 ARPINQ7Z6K5 226 aa14.91□□□□□ -0.02
SCLT1-205ENST00000503401 KRT73Q86Y46 540 aa14.91□□□□□ -0.02
SCLT1-205ENST00000503401 SMYD1Q8NB12 490 aa14.91□□□□□ -0.02
SCLT1-205ENST00000503401 WDYHV1Q96HA8 205 aa14.91□□□□□ -0.02
SCLT1-205ENST00000503401 PIGQQ9BRB3 760 aa14.91□□□□□ -0.02
SCLT1-205ENST00000503401 SPATA9Q9BWV2 254 aa14.91□□□□□ -0.02
SCLT1-205ENST00000503401 TMEM185BQ9H7F4 350 aa14.91□□□□□ -0.02
SCLT1-205ENST00000503401 ERRFI1Q9UJM3 462 aaPredicted RBP14.91□□□□□ -0.02
SCLT1-205ENST00000503401 PACSIN3Q9UKS6 424 aa14.91□□□□□ -0.02
SCLT1-205ENST00000503401 IFT52Q9Y366 437 aa14.91□□□□□ -0.02
SCLT1-205ENST00000503401 PHF3Q92576 2039 aaKnown RBP14.9□□□□□ -0.02
SCLT1-205ENST00000503401 ARHGAP21Q5T5U3 1957 aa14.9□□□□□ -0.02
SCLT1-205ENST00000503401 LRRK2Q5S007 2527 aa14.9□□□□□ -0.02
SCLT1-205ENST00000503401 FAM220BPB1ANY3 271 aa14.9□□□□□ -0.02
SCLT1-205ENST00000503401 H0YC42 278 aa14.9□□□□□ -0.02
SCLT1-205ENST00000503401 ACTL6AO96019 429 aa14.9□□□□□ -0.02
SCLT1-205ENST00000503401 ESRRAP11474 423 aaPredicted RBP14.9□□□□□ -0.02
SCLT1-205ENST00000503401 PRKCAP17252 672 aa14.9□□□□□ -0.02
SCLT1-205ENST00000503401 CHMP24386 653 aa14.9□□□□□ -0.02
SCLT1-205ENST00000503401 TPD52P55327 224 aaPredicted RBP14.9□□□□□ -0.02
SCLT1-205ENST00000503401 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.9□□□□□ -0.02
SCLT1-205ENST00000503401 RNF220Q5VTB9 566 aa14.9□□□□□ -0.02
SCLT1-205ENST00000503401 UBQLNLQ8IYU4 475 aa14.9□□□□□ -0.02
SCLT1-205ENST00000503401 GTPBP8Q8N3Z3 284 aaPredicted RBP14.9□□□□□ -0.02
SCLT1-205ENST00000503401 OR2T12Q8NG77 320 aa14.9□□□□□ -0.02
SCLT1-205ENST00000503401 ZBTB8AQ96BR9 441 aa14.9□□□□□ -0.02
SCLT1-205ENST00000503401 ZNF607Q96SK3 696 aa14.9□□□□□ -0.02
SCLT1-205ENST00000503401 EXOSC3Q9NQT5 275 aaKnown RBP14.9□□□□□ -0.02
SCLT1-205ENST00000503401 UTP20O75691 2785 aaKnown RBP14.9□□□□□ -0.02
SCLT1-205ENST00000503401 KDM4EB2RXH2 506 aaPredicted RBP14.89□□□□□ -0.03
SCLT1-205ENST00000503401 M0QX08 132 aa14.89□□□□□ -0.03
SCLT1-205ENST00000503401 SEC14L5O43304 696 aa14.89□□□□□ -0.03
SCLT1-205ENST00000503401 DNAJA2O60884 412 aa14.89□□□□□ -0.03
SCLT1-205ENST00000503401 EPPINO95925 133 aa14.89□□□□□ -0.03
SCLT1-205ENST00000503401 PEPDP12955 493 aa14.89□□□□□ -0.03
SCLT1-205ENST00000503401 PRG2P13727 222 aa14.89□□□□□ -0.03
SCLT1-205ENST00000503401 PGCP20142 388 aa14.89□□□□□ -0.03
SCLT1-205ENST00000503401 POU3F2P20265 443 aaPredicted RBP14.89□□□□□ -0.03
SCLT1-205ENST00000503401 PSMA4P25789 261 aaKnown RBP14.89□□□□□ -0.03
SCLT1-205ENST00000503401 CLDN18P56856 261 aa14.89□□□□□ -0.03
SCLT1-205ENST00000503401 SESN3P58005 492 aa14.89□□□□□ -0.03
SCLT1-205ENST00000503401 MXRA7P84157 204 aa14.89□□□□□ -0.03
SCLT1-205ENST00000503401 HOXC5Q00444 222 aa14.89□□□□□ -0.03
SCLT1-205ENST00000503401 GLYR1Q49A26 553 aaPredicted RBP14.89□□□□□ -0.03
SCLT1-205ENST00000503401 C4orf17Q53FE4 359 aa14.89□□□□□ -0.03
SCLT1-205ENST00000503401 POMZP3Q6PJE2 187 aa14.89□□□□□ -0.03
SCLT1-205ENST00000503401 ENPP6Q6UWR7 440 aa14.89□□□□□ -0.03
SCLT1-205ENST00000503401 PLXDC2Q6UX71 529 aa14.89□□□□□ -0.03
SCLT1-205ENST00000503401 TRPM8Q7Z2W7 1104 aa14.89□□□□□ -0.03
SCLT1-205ENST00000503401 ARMC8Q8IUR7 673 aa14.89□□□□□ -0.03
SCLT1-205ENST00000503401 ZNF563Q8TA94 476 aa14.89□□□□□ -0.03
SCLT1-205ENST00000503401 NSL1Q96IY1 281 aa14.89□□□□□ -0.03
SCLT1-205ENST00000503401 PRDM14Q9GZV8 571 aa14.89□□□□□ -0.03
SCLT1-205ENST00000503401 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.88□□□□□ -0.03
SCLT1-205ENST00000503401 CFAP73A6NFT4 308 aa14.88□□□□□ -0.03
SCLT1-205ENST00000503401 SERPINB7O75635 380 aa14.88□□□□□ -0.03
SCLT1-205ENST00000503401 MFN2O95140 757 aa14.88□□□□□ -0.03
SCLT1-205ENST00000503401 ZNF17P17021 662 aa14.88□□□□□ -0.03
SCLT1-205ENST00000503401 PRKAR1BP31321 381 aa14.88□□□□□ -0.03
SCLT1-205ENST00000503401 IDH2P48735 452 aaKnown RBP14.88□□□□□ -0.03
SCLT1-205ENST00000503401 GSK3BP49841 420 aa14.88□□□□□ -0.03
SCLT1-205ENST00000503401 SUCLG1P53597 346 aaKnown RBP14.88□□□□□ -0.03
SCLT1-205ENST00000503401 CRYBA2P53672 197 aa14.88□□□□□ -0.03
SCLT1-205ENST00000503401 CLDN20P56880 219 aa14.88□□□□□ -0.03
SCLT1-205ENST00000503401 RTL6Q6ICC9 239 aa14.88□□□□□ -0.03
SCLT1-205ENST00000503401 ULK2Q8IYT8 1036 aa14.88□□□□□ -0.03
SCLT1-205ENST00000503401 MICU2Q8IYU8 434 aa14.88□□□□□ -0.03
SCLT1-205ENST00000503401 RNF148Q8N7C7 305 aa14.88□□□□□ -0.03
SCLT1-205ENST00000503401 ATP6V1C2Q8NEY4 427 aa14.88□□□□□ -0.03
SCLT1-205ENST00000503401 TAMM41Q96BW9 452 aa14.88□□□□□ -0.03
SCLT1-205ENST00000503401 WFDC6Q9BQY6 131 aa14.88□□□□□ -0.03
SCLT1-205ENST00000503401 SPATA5L1Q9BVQ7 753 aa14.88□□□□□ -0.03
SCLT1-205ENST00000503401 TP63Q9H3D4 680 aaPredicted RBP14.88□□□□□ -0.03
SCLT1-205ENST00000503401 ALG2Q9H553 416 aa14.88□□□□□ -0.03
SCLT1-205ENST00000503401 SPAG4Q9NPE6 437 aa14.88□□□□□ -0.03
SCLT1-205ENST00000503401 ADA2Q9NZK5 511 aa14.88□□□□□ -0.03
SCLT1-205ENST00000503401 ABCD2Q9UBJ2 740 aa14.88□□□□□ -0.03
SCLT1-205ENST00000503401 SLC5A6Q9Y289 635 aa14.88□□□□□ -0.03
SCLT1-205ENST00000503401 MEMO1Q9Y316 297 aa14.88□□□□□ -0.03
SCLT1-205ENST00000503401 MPDZO75970 2070 aa14.88□□□□□ -0.03
SCLT1-205ENST00000503401 ELOVL7A1L3X0 281 aa14.88□□□□□ -0.03
SCLT1-205ENST00000503401 C7orf72A4D263 438 aa14.88□□□□□ -0.03
SCLT1-205ENST00000503401 FIGNL2A6NMB9 653 aa14.88□□□□□ -0.03
SCLT1-205ENST00000503401 B2RBV5 119 aa14.88□□□□□ -0.03
SCLT1-205ENST00000503401 H0Y3Z8 333 aa14.88□□□□□ -0.03
SCLT1-205ENST00000503401 EFNA2O43921 213 aa14.88□□□□□ -0.03
SCLT1-205ENST00000503401 RNF224P0DH78 156 aa14.88□□□□□ -0.03
SCLT1-205ENST00000503401 T-ENOLP0DO92 83 aa14.88□□□□□ -0.03
SCLT1-205ENST00000503401 ZNF708P17019 499 aa14.88□□□□□ -0.03
SCLT1-205ENST00000503401 ACVR2AP27037 513 aa14.88□□□□□ -0.03
SCLT1-205ENST00000503401 EIF1P41567 113 aaKnown RBP14.88□□□□□ -0.03
SCLT1-205ENST00000503401 ACAA2P42765 397 aaKnown RBP14.88□□□□□ -0.03
SCLT1-205ENST00000503401 SLC6A8P48029 635 aa14.88□□□□□ -0.03
SCLT1-205ENST00000503401 CLDN15P56746 228 aa14.88□□□□□ -0.03
SCLT1-205ENST00000503401 EPS8Q12929 822 aa14.88□□□□□ -0.03
SCLT1-205ENST00000503401 DUSP7Q16829 419 aa14.88□□□□□ -0.03
SCLT1-205ENST00000503401 INTS11Q5TA45 600 aaKnown RBP14.88□□□□□ -0.03
SCLT1-205ENST00000503401 ERICH5Q6P6B1 374 aa14.88□□□□□ -0.03
SCLT1-205ENST00000503401 GRAMD2AQ8IUY3 354 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms