RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 ZNF350Q9GZX5 532 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 FAM96AQ9H5X1 160 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 GDF3Q9NR23 364 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 IKZF3Q9UKT9 509 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 TBX21Q9UL17 535 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 HPCAL4Q9UM19 191 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 BARX2Q9UMQ3 279 aaPredicted RBP2.19□□□□□ -2.06
RIF1-212ENST00000498041 ERVK-19Q9WJR5 959 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 CCL26Q9Y258 94 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 FBXO7Q9Y3I1 522 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 OR1A2Q9Y585 309 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.19□□□□□ -2.06
RIF1-212ENST00000498041 MYO10Q9HD67 2058 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 PLXNB3Q9ULL4 1909 aa2.19□□□□□ -2.06
RIF1-212ENST00000498041 MAST4O15021 2626 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 hCG_1818297A0A087WSY0 165 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 A0A0D9SEW6 157 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 A0A0U1RQG5 324 aaPredicted RBP2.18□□□□□ -2.06
RIF1-212ENST00000498041 LRRD1A4D1F6 860 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 A4D1N5 150 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 CTAGE15A4D2H0 777 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 KRT87PA6NCN2 255 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 A8MU10 97 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 H0Y626 953 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 GOLGA8RI6L899 631 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 KCNK1O00180 336 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 CHUKO15111 745 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 CASC3O15234 703 aaKnown RBP2.18□□□□□ -2.06
RIF1-212ENST00000498041 CCL16O15467 120 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 SPOPO43791 374 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 MFSD11O43934 449 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 KIAA0513O60268 411 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 CSO75390 466 aaKnown RBP2.18□□□□□ -2.06
RIF1-212ENST00000498041 SPAG7O75391 227 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 VENTXO95231 258 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 CD160O95971 181 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 AGTP01019 485 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 KRT14P02533 472 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 C1QAP02745 245 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 TPM3P06753 285 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 OR9G9P0C7N8 305 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 GLULP15104 373 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 HMGA1P17096 107 aaKnown RBP2.18□□□□□ -2.06
RIF1-212ENST00000498041 WARSP23381 471 aaKnown RBP2.18□□□□□ -2.06
RIF1-212ENST00000498041 GLRA1P23415 457 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 FOXN2P32314 431 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 CDH5P33151 784 aaPredicted RBP2.18□□□□□ -2.06
RIF1-212ENST00000498041 ID1P41134 155 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 TNNT3P45378 269 aaPredicted RBP2.18□□□□□ -2.06
RIF1-212ENST00000498041 PLTPP55058 493 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 CDH6P55285 790 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 SNU13P55769 128 aaKnown RBP2.18□□□□□ -2.06
RIF1-212ENST00000498041 DAOAP59103 153 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 RPS24P62847 133 aaKnown RBP2.18□□□□□ -2.06
RIF1-212ENST00000498041 TNNC1P63316 161 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 KRT83P78385 493 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 YWHAHQ04917 246 aaPredicted RBP2.18□□□□□ -2.06
RIF1-212ENST00000498041 INCA1Q0VD86 236 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 NFE2L1Q14494 772 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 CASP8Q14790 479 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 MEF2DQ14814 521 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 SLC17A1Q14916 467 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 PSMD5Q16401 504 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 PKN2Q16513 984 aaKnown RBP2.18□□□□□ -2.06
RIF1-212ENST00000498041 PCK2Q16822 640 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 Q1RN00 199 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 FBXO48Q5FWF7 155 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 TMEM31Q5JXX7 168 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 ATAD3CQ5T2N8 411 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 LCE3AQ5TA76 89 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 DUPD1Q68J44 220 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 NCBP2-AS2Q69YL0 99 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 DNAJC24Q6P3W2 148 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 CCDC137Q6PK04 289 aaKnown RBP2.18□□□□□ -2.06
RIF1-212ENST00000498041 RPS27LQ71UM5 84 aaKnown RBP2.18□□□□□ -2.06
RIF1-212ENST00000498041 KRT77Q7Z794 578 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 TMEM110Q86TL2 294 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 ASPGQ86U10 573 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 CTAGE6Q86UF2 777 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 ZNF410Q86VK4 478 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 MFSD6LQ8IWD5 586 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 ZNF683Q8IZ20 524 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 GVQW1Q8N7I0 195 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 NKAIN3Q8N8D7 197 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 MNS1Q8NEH6 495 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 ZNF397Q8NF99 534 aaPredicted RBP2.18□□□□□ -2.06
RIF1-212ENST00000498041 ITFG1Q8TB96 612 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 GOLGA5Q8TBA6 731 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 FBXO25Q8TCJ0 367 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 DQX1Q8TE96 717 aaKnown RBP2.18□□□□□ -2.06
RIF1-212ENST00000498041 CTNNBL1Q8WYA6 563 aaPredicted RBP2.18□□□□□ -2.06
RIF1-212ENST00000498041 AP2M1Q96CW1 435 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 GLT1D1Q96MS3 346 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 GUCD1Q96NT3 240 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 PANX3Q96QZ0 392 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 RAB40CQ96S21 281 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 NPY6RQ99463 290 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 JPH2Q9BR39 696 aaPredicted RBP2.18□□□□□ -2.06
RIF1-212ENST00000498041 TIPINQ9BVW5 301 aa2.18□□□□□ -2.06
RIF1-212ENST00000498041 DUSP16Q9BY84 665 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms