RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 EPS8Q12929 822 aa10.79□□□□□ -0.68
CUX1-210ENST00000497815 FOXF1Q12946 379 aa10.79□□□□□ -0.68
CUX1-210ENST00000497815 GANABQ14697 944 aaKnown RBP10.79□□□□□ -0.68
CUX1-210ENST00000497815 PLPPR5Q32ZL2 321 aa10.79□□□□□ -0.68
CUX1-210ENST00000497815 POMZP3Q6PJE2 187 aa10.79□□□□□ -0.68
CUX1-210ENST00000497815 ZNF550Q7Z398 422 aa10.79□□□□□ -0.68
CUX1-210ENST00000497815 VTCN1Q7Z7D3 282 aa10.79□□□□□ -0.68
CUX1-210ENST00000497815 LSRQ86X29 649 aaPredicted RBP10.79□□□□□ -0.68
CUX1-210ENST00000497815 GRAMD2AQ8IUY3 354 aa10.79□□□□□ -0.68
CUX1-210ENST00000497815 LACC1Q8IV20 430 aa10.79□□□□□ -0.68
CUX1-210ENST00000497815 ZNF440Q8IYI8 595 aa10.79□□□□□ -0.68
CUX1-210ENST00000497815 ULK2Q8IYT8 1036 aa10.79□□□□□ -0.68
CUX1-210ENST00000497815 CADM2Q8N3J6 435 aa10.79□□□□□ -0.68
CUX1-210ENST00000497815 RASSF5Q8WWW0 418 aa10.79□□□□□ -0.68
CUX1-210ENST00000497815 LZICQ8WZA0 190 aa10.79□□□□□ -0.68
CUX1-210ENST00000497815 RELTQ969Z4 430 aa10.79□□□□□ -0.68
CUX1-210ENST00000497815 HSH2DQ96JZ2 352 aa10.79□□□□□ -0.68
CUX1-210ENST00000497815 NSMCE2Q96MF7 247 aa10.79□□□□□ -0.68
CUX1-210ENST00000497815 SFXN2Q96NB2 322 aa10.79□□□□□ -0.68
CUX1-210ENST00000497815 SLX1AQ9BQ83 275 aa10.79□□□□□ -0.68
CUX1-210ENST00000497815 QPCTLQ9NXS2 382 aa10.79□□□□□ -0.68
CUX1-210ENST00000497815 RPS6KA6Q9UK32 745 aa10.79□□□□□ -0.68
CUX1-210ENST00000497815 BAG5Q9UL15 447 aa10.79□□□□□ -0.68
CUX1-210ENST00000497815 IGSF10Q6WRI0 2623 aa10.79□□□□□ -0.68
CUX1-210ENST00000497815 A0A087WZY1 265 aa10.78□□□□□ -0.68
CUX1-210ENST00000497815 A0A1B0GTH9 108 aa10.78□□□□□ -0.68
CUX1-210ENST00000497815 TMEM229AB2RXF0 380 aa10.78□□□□□ -0.68
CUX1-210ENST00000497815 SYT5O00445 386 aa10.78□□□□□ -0.68
CUX1-210ENST00000497815 STAMBPO95630 424 aa10.78□□□□□ -0.68
CUX1-210ENST00000497815 LGI1O95970 557 aa10.78□□□□□ -0.68
CUX1-210ENST00000497815 C8BP07358 591 aa10.78□□□□□ -0.68
CUX1-210ENST00000497815 GP1BBP13224 206 aa10.78□□□□□ -0.68
CUX1-210ENST00000497815 UQCRBP14927 111 aa10.78□□□□□ -0.68
CUX1-210ENST00000497815 PRKCAP17252 672 aa10.78□□□□□ -0.68
CUX1-210ENST00000497815 GCKP35557 465 aa10.78□□□□□ -0.68
CUX1-210ENST00000497815 ACAA2P42765 397 aaKnown RBP10.78□□□□□ -0.68
CUX1-210ENST00000497815 ZNF136P52737 540 aa10.78□□□□□ -0.68
CUX1-210ENST00000497815 SESN3P58005 492 aa10.78□□□□□ -0.68
CUX1-210ENST00000497815 COPZ1P61923 177 aa10.78□□□□□ -0.68
CUX1-210ENST00000497815 SELENOWP63302 87 aa10.78□□□□□ -0.68
CUX1-210ENST00000497815 ELOAQ14241 798 aaKnown RBP10.78□□□□□ -0.68
CUX1-210ENST00000497815 TRIM25Q14258 630 aaKnown RBP10.78□□□□□ -0.68
CUX1-210ENST00000497815 FXNQ16595 210 aa10.78□□□□□ -0.68
CUX1-210ENST00000497815 PGM2L1Q6PCE3 622 aa10.78□□□□□ -0.68
CUX1-210ENST00000497815 GFRALQ6UXV0 394 aa10.78□□□□□ -0.68
CUX1-210ENST00000497815 FKBP9P1Q75LS8 142 aa10.78□□□□□ -0.68
CUX1-210ENST00000497815 CBLL1Q75N03 491 aa10.78□□□□□ -0.68
CUX1-210ENST00000497815 TRILQ7L0X0 811 aa10.78□□□□□ -0.68
CUX1-210ENST00000497815 CARM1Q86X55 608 aa10.78□□□□□ -0.68
CUX1-210ENST00000497815 DHFR2Q86XF0 187 aa10.78□□□□□ -0.68
CUX1-210ENST00000497815 RBM45Q8IUH3 476 aaKnown RBP10.78□□□□□ -0.68
CUX1-210ENST00000497815 GHDCQ8N2G8 530 aa10.78□□□□□ -0.68
CUX1-210ENST00000497815 FAM86B1Q8N7N1 296 aa10.78□□□□□ -0.68
CUX1-210ENST00000497815 OR4D11Q8NGI4 311 aa10.78□□□□□ -0.68
CUX1-210ENST00000497815 NEIL3Q8TAT5 605 aa10.78□□□□□ -0.68
CUX1-210ENST00000497815 ZBTB8AQ96BR9 441 aa10.78□□□□□ -0.68
CUX1-210ENST00000497815 RNF145Q96MT1 663 aa10.78□□□□□ -0.68
CUX1-210ENST00000497815 ARHGDIGQ99819 225 aa10.78□□□□□ -0.68
CUX1-210ENST00000497815 GORASP2Q9H8Y8 452 aa10.78□□□□□ -0.68
CUX1-210ENST00000497815 ACKR4Q9NPB9 350 aa10.78□□□□□ -0.68
CUX1-210ENST00000497815 CTPS2Q9NRF8 586 aa10.78□□□□□ -0.68
CUX1-210ENST00000497815 DCAF13Q9NV06 445 aaKnown RBP10.78□□□□□ -0.68
CUX1-210ENST00000497815 ACTR3BQ9P1U1 418 aa10.78□□□□□ -0.68
CUX1-210ENST00000497815 SPRR3Q9UBC9 169 aa10.78□□□□□ -0.68
CUX1-210ENST00000497815 ATRXP46100 2492 aa10.77□□□□□ -0.69
CUX1-210ENST00000497815 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.77□□□□□ -0.69
CUX1-210ENST00000497815 OR2M5A3KFT3 312 aa10.77□□□□□ -0.69
CUX1-210ENST00000497815 NPIPA2E9PIF3 369 aa10.77□□□□□ -0.69
CUX1-210ENST00000497815 NPIPA3F8WFD2 350 aa10.77□□□□□ -0.69
CUX1-210ENST00000497815 H3BML4 177 aa10.77□□□□□ -0.69
CUX1-210ENST00000497815 PRKD3O94806 890 aa10.77□□□□□ -0.69
CUX1-210ENST00000497815 IGHG3P01860 377 aa10.77□□□□□ -0.69
CUX1-210ENST00000497815 OPN1LWP04000 364 aa10.77□□□□□ -0.69
CUX1-210ENST00000497815 EDN3P14138 238 aa10.77□□□□□ -0.69
CUX1-210ENST00000497815 CCNA2P20248 432 aa10.77□□□□□ -0.69
CUX1-210ENST00000497815 STARP49675 285 aa10.77□□□□□ -0.69
CUX1-210ENST00000497815 B3GALT5-AS1P59052 145 aa10.77□□□□□ -0.69
CUX1-210ENST00000497815 MERTKQ12866 999 aa10.77□□□□□ -0.69
CUX1-210ENST00000497815 NPTX1Q15818 432 aa10.77□□□□□ -0.69
CUX1-210ENST00000497815 IGFBP7Q16270 282 aa10.77□□□□□ -0.69
CUX1-210ENST00000497815 NRF1Q16656 503 aa10.77□□□□□ -0.69
CUX1-210ENST00000497815 ZSCAN26Q16670 478 aa10.77□□□□□ -0.69
CUX1-210ENST00000497815 KRTCAP3Q53RY4 240 aa10.77□□□□□ -0.69
CUX1-210ENST00000497815 ENPP6Q6UWR7 440 aa10.77□□□□□ -0.69
CUX1-210ENST00000497815 DEF8Q6ZN54 512 aa10.77□□□□□ -0.69
CUX1-210ENST00000497815 ASRGL1Q7L266 308 aa10.77□□□□□ -0.69
CUX1-210ENST00000497815 RANBP3LQ86VV4 465 aaPredicted RBP10.77□□□□□ -0.69
CUX1-210ENST00000497815 ATP6V1C2Q8NEY4 427 aa10.77□□□□□ -0.69
CUX1-210ENST00000497815 OR52E4Q8NGH9 312 aa10.77□□□□□ -0.69
CUX1-210ENST00000497815 OR6T1Q8NGN1 323 aa10.77□□□□□ -0.69
CUX1-210ENST00000497815 RNF217Q8TC41 542 aa10.77□□□□□ -0.69
CUX1-210ENST00000497815 POC1BQ8TC44 478 aa10.77□□□□□ -0.69
CUX1-210ENST00000497815 TMEM234Q8WY98 164 aa10.77□□□□□ -0.69
CUX1-210ENST00000497815 ST8SIA1Q92185 356 aa10.77□□□□□ -0.69
CUX1-210ENST00000497815 SMPDL3BQ92485 455 aa10.77□□□□□ -0.69
CUX1-210ENST00000497815 ASB9Q96DX5 294 aa10.77□□□□□ -0.69
CUX1-210ENST00000497815 LRGUKQ96M69 825 aa10.77□□□□□ -0.69
CUX1-210ENST00000497815 MCHR1Q99705 422 aa10.77□□□□□ -0.69
CUX1-210ENST00000497815 BARD1Q99728 777 aaKnown RBP10.77□□□□□ -0.69
CUX1-210ENST00000497815 PIGQQ9BRB3 760 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms