RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 H3F3CQ6NXT2 135 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 ZDHHC21Q8IVQ6 265 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 SULF2Q8IWU5 870 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 ZZZ3Q8IYH5 903 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 HSH2DQ96JZ2 352 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 ANKRA2Q9H9E1 313 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 ACER3Q9NUN7 267 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 TAS2R1Q9NYW7 299 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 ZNF462Q96JM2 2506 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 NPIPA5A0A0B4J1W7 369 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 NPIPA7E9PJI5 369 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 GSC2O15499 205 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 TPST1O60507 370 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 TRIM3O75382 744 aaPredicted RBP7.89□□□□□ -1.15
U2AF1-212ENST00000496462 OR5F1O95221 314 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 FESP07332 822 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 NPIPA8P0DM63 369 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 GGT1P19440 569 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 SELENOWP63302 87 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 RNF220Q5VTB9 566 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 ZNF585AQ6P3V2 769 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 Q6ZS92 163 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 ZNF100Q8IYN0 542 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 ZNF321PQ8N8H1 164 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 OR5B2Q96R09 309 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 TP63Q9H3D4 680 aaPredicted RBP7.89□□□□□ -1.15
U2AF1-212ENST00000496462 PRORYQ9H606 182 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 SLC24A3Q9HC58 644 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 LUZP4Q9P127 313 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 AP4B1Q9Y6B7 739 aa7.89□□□□□ -1.15
U2AF1-212ENST00000496462 KMT2BQ9UMN6 2715 aaPredicted RBP7.89□□□□□ -1.15
U2AF1-212ENST00000496462 IGSF10Q6WRI0 2623 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 OR14I1A6ND48 311 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 TNFRSF11BO00300 401 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 EIF1AYO14602 144 aaKnown RBP7.88□□□□□ -1.15
U2AF1-212ENST00000496462 FMO6PO60774 539 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 CST1P01037 141 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 CCL3P10147 92 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 RHCEP18577 417 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 EIF1AXP47813 144 aaKnown RBP7.88□□□□□ -1.15
U2AF1-212ENST00000496462 CARD18P57730 90 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 PMS2P3Q13401 168 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 MED21Q13503 144 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 SLC6A19Q695T7 634 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 OR5M10Q6IEU7 315 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 ZNF613Q6PF04 617 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 DLEU7Q6UYE1 221 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 YRDCQ86U90 279 aaKnown RBP7.88□□□□□ -1.15
U2AF1-212ENST00000496462 ZDHHC13Q8IUH4 622 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 SPPL2CQ8IUH8 684 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 SLC43A2Q8N370 569 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 MRPL48Q96GC5 212 aaKnown RBP7.88□□□□□ -1.15
U2AF1-212ENST00000496462 TM9SF2Q99805 663 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 MAGIXQ9H6Y5 334 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 TUBA8Q9NY65 449 aaPredicted RBP7.88□□□□□ -1.15
U2AF1-212ENST00000496462 AP4S1Q9Y587 144 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 CORINQ9Y5Q5 1042 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 ATXN7O15265 892 aaPredicted RBP7.88□□□□□ -1.15
U2AF1-212ENST00000496462 TSPAN2O60636 221 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 TNFRSF21O75509 655 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 VAMP5O95183 116 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 RCBTB2O95199 551 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 ZNF23P17027 643 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 SLC1A3P43003 542 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 MGAT2Q10469 447 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 FHL5Q5TD97 284 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 HBMQ6B0K9 141 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 RETREG3Q86VR2 466 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 DNAJC9Q8WXX5 260 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 MAL2Q969L2 176 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 SYNPO2LQ9H987 977 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 EDARQ9UNE0 448 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 C15orf41Q9Y2V0 281 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 HDGFL3Q9Y3E1 203 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 SCN3AQ9NY46 2000 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 A0A1W2PRG6 482 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 CPSF4LA6NMK7 179 aaKnown RBP7.88□□□□□ -1.15
U2AF1-212ENST00000496462 A8MVM7 634 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 DVL2O14641 736 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 CASKO14936 926 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 WDR1O75083 606 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 NME6O75414 186 aaPredicted RBP7.88□□□□□ -1.15
U2AF1-212ENST00000496462 CCNB2O95067 398 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 PRB1P04280 392 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 TFPTP0C1Z6 253 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 EDN3P14138 238 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 ZNF17P17021 662 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 PAICSP22234 425 aaKnown RBP7.88□□□□□ -1.15
U2AF1-212ENST00000496462 SFTPDP35247 375 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 ZNF791Q3KP31 576 aaPredicted RBP7.88□□□□□ -1.15
U2AF1-212ENST00000496462 TMEM176BQ3YBM2 270 aaPredicted RBP7.88□□□□□ -1.15
U2AF1-212ENST00000496462 RPL13AP3Q6NVV1 102 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 DNM1P34Q6PK57 102 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 HIPK1Q86Z02 1210 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 ZNF555Q8NEP9 628 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 FAR1Q8WVX9 515 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 SGTBQ96EQ0 304 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 KLHL15Q96M94 604 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 OSBPL10Q9BXB5 764 aa7.88□□□□□ -1.15
U2AF1-212ENST00000496462 TTTY12Q9BZ98 90 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms