RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 SELENBP1Q13228 472 aa21.68■■□□□ 1.06
HLA-C-209ENST00000495835 RNPS1Q15287 305 aaKnown RBP21.68■■□□□ 1.06
HLA-C-209ENST00000495835 PPP4R4Q6NUP7 873 aa21.68■■□□□ 1.06
HLA-C-209ENST00000495835 EIF3MQ7L2H7 374 aaKnown RBP21.68■■□□□ 1.06
HLA-C-209ENST00000495835 CLEC4FQ8N1N0 589 aa21.68■■□□□ 1.06
HLA-C-209ENST00000495835 XAGE5Q8WWM1 108 aa21.68■■□□□ 1.06
HLA-C-209ENST00000495835 ST8SIA1Q92185 356 aa21.68■■□□□ 1.06
HLA-C-209ENST00000495835 MAELQ96JY0 434 aaKnown RBP21.68■■□□□ 1.06
HLA-C-209ENST00000495835 WFIKKN1Q96NZ8 548 aa21.68■■□□□ 1.06
HLA-C-209ENST00000495835 ALPK1Q96QP1 1244 aa21.68■■□□□ 1.06
HLA-C-209ENST00000495835 ZBTB18Q99592 522 aa21.68■■□□□ 1.06
HLA-C-209ENST00000495835 MARCOQ9UEW3 520 aaPredicted RBP21.68■■□□□ 1.06
HLA-C-209ENST00000495835 KCNE5Q9UJ90 142 aa21.68■■□□□ 1.06
HLA-C-209ENST00000495835 MKLN1Q9UL63 735 aa21.68■■□□□ 1.06
HLA-C-209ENST00000495835 SLC35A3Q9Y2D2 325 aa21.68■■□□□ 1.06
HLA-C-209ENST00000495835 WDR45Q9Y484 360 aa21.68■■□□□ 1.06
HLA-C-209ENST00000495835 UQCRHLA0A096LP55 91 aa21.67■■□□□ 1.06
HLA-C-209ENST00000495835 KIAA0513O60268 411 aa21.67■■□□□ 1.06
HLA-C-209ENST00000495835 RAF1P04049 648 aa21.67■■□□□ 1.06
HLA-C-209ENST00000495835 PGRP06401 933 aa21.67■■□□□ 1.06
HLA-C-209ENST00000495835 IDO1P14902 403 aa21.67■■□□□ 1.06
HLA-C-209ENST00000495835 PPP3CBP16298 524 aa21.67■■□□□ 1.06
HLA-C-209ENST00000495835 PGCP20142 388 aa21.67■■□□□ 1.06
HLA-C-209ENST00000495835 EPHA3P29320 983 aa21.67■■□□□ 1.06
HLA-C-209ENST00000495835 CHI3L1P36222 383 aaPredicted RBP21.67■■□□□ 1.06
HLA-C-209ENST00000495835 MAGEA8P43361 318 aa21.67■■□□□ 1.06
HLA-C-209ENST00000495835 SKP2Q13309 424 aa21.67■■□□□ 1.06
HLA-C-209ENST00000495835 TOMM34Q15785 309 aaPredicted RBP21.67■■□□□ 1.06
HLA-C-209ENST00000495835 BEND4Q6ZU67 534 aa21.67■■□□□ 1.06
HLA-C-209ENST00000495835 MGARPQ8TDB4 240 aa21.67■■□□□ 1.06
HLA-C-209ENST00000495835 TMEM234Q8WY98 164 aa21.67■■□□□ 1.06
HLA-C-209ENST00000495835 PMM1Q92871 262 aa21.67■■□□□ 1.06
HLA-C-209ENST00000495835 ZBTB9Q96C00 473 aa21.67■■□□□ 1.06
HLA-C-209ENST00000495835 ROPN1LQ96C74 230 aa21.67■■□□□ 1.06
HLA-C-209ENST00000495835 TEX37Q96LM6 180 aa21.67■■□□□ 1.06
HLA-C-209ENST00000495835 SLC35A5Q9BS91 424 aa21.67■■□□□ 1.06
HLA-C-209ENST00000495835 MED18Q9BUE0 208 aa21.67■■□□□ 1.06
HLA-C-209ENST00000495835 TMEM185BQ9H7F4 350 aa21.67■■□□□ 1.06
HLA-C-209ENST00000495835 LIPT1Q9Y234 373 aa21.67■■□□□ 1.06
HLA-C-209ENST00000495835 CSTAP01040 98 aa21.66■■□□□ 1.06
HLA-C-209ENST00000495835 OPN1LWP04000 364 aa21.66■■□□□ 1.06
HLA-C-209ENST00000495835 IL6P05231 212 aa21.66■■□□□ 1.06
HLA-C-209ENST00000495835 CRYGSP22914 178 aa21.66■■□□□ 1.06
HLA-C-209ENST00000495835 SFTPDP35247 375 aa21.66■■□□□ 1.06
HLA-C-209ENST00000495835 QPRTQ15274 297 aa21.66■■□□□ 1.06
HLA-C-209ENST00000495835 ZNF239Q16600 458 aaKnown RBP21.66■■□□□ 1.06
HLA-C-209ENST00000495835 TYW3Q6IPR3 259 aaKnown RBP21.66■■□□□ 1.06
HLA-C-209ENST00000495835 STK32CQ86UX6 486 aa21.66■■□□□ 1.06
HLA-C-209ENST00000495835 SLC43A2Q8N370 569 aa21.66■■□□□ 1.06
HLA-C-209ENST00000495835 TMCO5AQ8N6Q1 288 aa21.66■■□□□ 1.06
HLA-C-209ENST00000495835 PIWIL2Q8TC59 973 aaKnown RBP21.66■■□□□ 1.06
HLA-C-209ENST00000495835 RNF128Q8TEB7 428 aa21.66■■□□□ 1.06
HLA-C-209ENST00000495835 ZFP90Q8TF47 636 aa21.66■■□□□ 1.06
HLA-C-209ENST00000495835 OR52E6Q96RD3 313 aa21.66■■□□□ 1.06
HLA-C-209ENST00000495835 PANX1Q96RD7 426 aa21.66■■□□□ 1.06
HLA-C-209ENST00000495835 TACO1Q9BSH4 297 aaKnown RBP21.66■■□□□ 1.06
HLA-C-209ENST00000495835 OR10A4Q9H209 315 aa21.66■■□□□ 1.06
HLA-C-209ENST00000495835 WDR55Q9H6Y2 383 aaPredicted RBP21.66■■□□□ 1.06
HLA-C-209ENST00000495835 CCDC154A6NI56 674 aa21.65■■□□□ 1.06
HLA-C-209ENST00000495835 RAC3P60763 192 aa21.65■■□□□ 1.06
HLA-C-209ENST00000495835 GSTA3Q16772 222 aa21.65■■□□□ 1.06
HLA-C-209ENST00000495835 TMEM176BQ3YBM2 270 aaPredicted RBP21.65■■□□□ 1.06
HLA-C-209ENST00000495835 PDCD4Q53EL6 469 aaKnown RBP21.65■■□□□ 1.06
HLA-C-209ENST00000495835 AGBL2Q5U5Z8 902 aa21.65■■□□□ 1.06
HLA-C-209ENST00000495835 TNFAIP8L2Q6P589 184 aaPredicted RBP21.65■■□□□ 1.06
HLA-C-209ENST00000495835 ZNF619Q8N2I2 560 aa21.65■■□□□ 1.06
HLA-C-209ENST00000495835 FAM71CQ8NEG0 241 aa21.65■■□□□ 1.06
HLA-C-209ENST00000495835 RFWD2Q8NHY2 731 aa21.65■■□□□ 1.06
HLA-C-209ENST00000495835 THUMPD3Q9BV44 507 aaKnown RBP21.65■■□□□ 1.06
HLA-C-209ENST00000495835 SERINC1Q9NRX5 453 aa21.65■■□□□ 1.06
HLA-C-209ENST00000495835 PRDM4Q9UKN5 801 aa21.65■■□□□ 1.06
HLA-C-209ENST00000495835 PLEKHA6Q9Y2H5 1048 aa21.65■■□□□ 1.06
HLA-C-209ENST00000495835 HMGN4O00479 90 aa21.64■■□□□ 1.05
HLA-C-209ENST00000495835 PRKD3O94806 890 aa21.64■■□□□ 1.05
HLA-C-209ENST00000495835 KITP10721 976 aa21.64■■□□□ 1.05
HLA-C-209ENST00000495835 FKBP2P26885 142 aaKnown RBP21.64■■□□□ 1.05
HLA-C-209ENST00000495835 IL12AP29459 219 aa21.64■■□□□ 1.05
HLA-C-209ENST00000495835 CCR4P51679 360 aa21.64■■□□□ 1.05
HLA-C-209ENST00000495835 KEAP1Q14145 624 aa21.64■■□□□ 1.05
HLA-C-209ENST00000495835 NDUFAF6Q330K2 333 aa21.64■■□□□ 1.05
HLA-C-209ENST00000495835 C3orf33Q6P1S2 294 aa21.64■■□□□ 1.05
HLA-C-209ENST00000495835 RAB8BQ92930 207 aa21.64■■□□□ 1.05
HLA-C-209ENST00000495835 TRNT1Q96Q11 434 aaKnown RBP21.64■■□□□ 1.05
HLA-C-209ENST00000495835 EXOSC3Q9NQT5 275 aaKnown RBP21.64■■□□□ 1.05
HLA-C-209ENST00000495835 ST6GALNAC1Q9NSC7 600 aaPredicted RBP21.64■■□□□ 1.05
HLA-C-209ENST00000495835 KLHL28Q9NXS3 571 aa21.64■■□□□ 1.05
HLA-C-209ENST00000495835 CLEC4AQ9UMR7 237 aa21.64■■□□□ 1.05
HLA-C-209ENST00000495835 GOLGA8QA0A0J9YX86 632 aa21.63■■□□□ 1.05
HLA-C-209ENST00000495835 GOLGA8OA6NCC3 632 aa21.63■■□□□ 1.05
HLA-C-209ENST00000495835 GOLGA8NF8WBI6 632 aa21.63■■□□□ 1.05
HLA-C-209ENST00000495835 ATE1O95260 518 aa21.63■■□□□ 1.05
HLA-C-209ENST00000495835 SHC1P29353 583 aa21.63■■□□□ 1.05
HLA-C-209ENST00000495835 AGTR1P30556 359 aa21.63■■□□□ 1.05
HLA-C-209ENST00000495835 SLC7A1P30825 629 aa21.63■■□□□ 1.05
HLA-C-209ENST00000495835 CCKARP32238 428 aa21.63■■□□□ 1.05
HLA-C-209ENST00000495835 PGM1P36871 562 aa21.63■■□□□ 1.05
HLA-C-209ENST00000495835 RNF144AP50876 292 aaPredicted RBP21.63■■□□□ 1.05
HLA-C-209ENST00000495835 HPCAP84074 193 aa21.63■■□□□ 1.05
HLA-C-209ENST00000495835 FUT5Q11128 374 aa21.63■■□□□ 1.05
HLA-C-209ENST00000495835 TMEM201Q5SNT2 666 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms