RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 ELK4P28324 431 aa14.35□□□□□ -0.11
LIME1-209ENST00000494776 SFTPDP35247 375 aa14.35□□□□□ -0.11
LIME1-209ENST00000494776 OPRM1P35372 400 aa14.35□□□□□ -0.11
LIME1-209ENST00000494776 AGFG1P52594 562 aaKnown RBP14.35□□□□□ -0.11
LIME1-209ENST00000494776 ZNF136P52737 540 aa14.35□□□□□ -0.11
LIME1-209ENST00000494776 NFYCQ13952 458 aa14.35□□□□□ -0.11
LIME1-209ENST00000494776 RPS26P11Q5JNZ5 115 aaPredicted RBP14.35□□□□□ -0.11
LIME1-209ENST00000494776 GCNT6Q5T4J0 391 aa14.35□□□□□ -0.11
LIME1-209ENST00000494776 ADGRE4PQ86SQ3 457 aa14.35□□□□□ -0.11
LIME1-209ENST00000494776 DHDDSQ86SQ9 333 aa14.35□□□□□ -0.11
LIME1-209ENST00000494776 MSRB3Q8IXL7 192 aa14.35□□□□□ -0.11
LIME1-209ENST00000494776 OR52P1PQ8NH57 321 aa14.35□□□□□ -0.11
LIME1-209ENST00000494776 INTS12Q96CB8 462 aaKnown RBP14.35□□□□□ -0.11
LIME1-209ENST00000494776 LRRC46Q96FV0 321 aa14.35□□□□□ -0.11
LIME1-209ENST00000494776 TMEM19Q96HH6 336 aa14.35□□□□□ -0.11
LIME1-209ENST00000494776 ZFP3Q96NJ6 502 aa14.35□□□□□ -0.11
LIME1-209ENST00000494776 ZNF317Q96PQ6 595 aaPredicted RBP14.35□□□□□ -0.11
LIME1-209ENST00000494776 TREX2Q9BQ50 279 aaPredicted RBP14.35□□□□□ -0.11
LIME1-209ENST00000494776 ZNF232Q9UNY5 417 aa14.35□□□□□ -0.11
LIME1-209ENST00000494776 PCNX3Q9H6A9 2034 aa14.35□□□□□ -0.11
LIME1-209ENST00000494776 PCNX1Q96RV3 2341 aa14.35□□□□□ -0.11
LIME1-209ENST00000494776 MED12Q93074 2177 aa14.34□□□□□ -0.11
LIME1-209ENST00000494776 A0A0G2JPF8 293 aa14.34□□□□□ -0.11
LIME1-209ENST00000494776 HNRNPCL2B2RXH8 293 aa14.34□□□□□ -0.11
LIME1-209ENST00000494776 HNRNPCL3B7ZW38 293 aa14.34□□□□□ -0.11
LIME1-209ENST00000494776 DYNC1I1O14576 645 aa14.34□□□□□ -0.11
LIME1-209ENST00000494776 TNFSF11O14788 317 aa14.34□□□□□ -0.11
LIME1-209ENST00000494776 HNRNPCL1O60812 293 aaKnown RBP14.34□□□□□ -0.11
LIME1-209ENST00000494776 RCBTB2O95199 551 aa14.34□□□□□ -0.11
LIME1-209ENST00000494776 SYNGR4O95473 234 aa14.34□□□□□ -0.11
LIME1-209ENST00000494776 TGM6O95932 706 aa14.34□□□□□ -0.11
LIME1-209ENST00000494776 NUDT7P0C024 238 aa14.34□□□□□ -0.11
LIME1-209ENST00000494776 HNRNPCL4P0DMR1 293 aa14.34□□□□□ -0.11
LIME1-209ENST00000494776 NID1P14543 1247 aa14.34□□□□□ -0.11
LIME1-209ENST00000494776 PSMA4P25789 261 aaKnown RBP14.34□□□□□ -0.11
LIME1-209ENST00000494776 SLC6A8P48029 635 aa14.34□□□□□ -0.11
LIME1-209ENST00000494776 LARS2Q15031 903 aaKnown RBP14.34□□□□□ -0.11
LIME1-209ENST00000494776 PON3Q15166 354 aa14.34□□□□□ -0.11
LIME1-209ENST00000494776 MAPRE2Q15555 327 aa14.34□□□□□ -0.11
LIME1-209ENST00000494776 MAPK11Q15759 364 aa14.34□□□□□ -0.11
LIME1-209ENST00000494776 MMEL1Q495T6 779 aa14.34□□□□□ -0.11
LIME1-209ENST00000494776 LIN52Q52LA3 116 aa14.34□□□□□ -0.11
LIME1-209ENST00000494776 HBMQ6B0K9 141 aa14.34□□□□□ -0.11
LIME1-209ENST00000494776 OR2A2Q6IF42 318 aa14.34□□□□□ -0.11
LIME1-209ENST00000494776 POMZP3Q6PJE2 187 aa14.34□□□□□ -0.11
LIME1-209ENST00000494776 ESPNLQ6ZVH7 1005 aa14.34□□□□□ -0.11
LIME1-209ENST00000494776 GGNQ86UU5 652 aa14.34□□□□□ -0.11
LIME1-209ENST00000494776 GCNT2Q8N0V5 402 aa14.34□□□□□ -0.11
LIME1-209ENST00000494776 METTL25Q8N6Q8 603 aa14.34□□□□□ -0.11
LIME1-209ENST00000494776 ST8SIA1Q92185 356 aa14.34□□□□□ -0.11
LIME1-209ENST00000494776 FIG4Q92562 907 aa14.34□□□□□ -0.11
LIME1-209ENST00000494776 MAL2Q969L2 176 aa14.34□□□□□ -0.11
LIME1-209ENST00000494776 MARVELD3Q96A59 401 aa14.34□□□□□ -0.11
LIME1-209ENST00000494776 ZNF845Q96IR2 970 aaPredicted RBP14.34□□□□□ -0.11
LIME1-209ENST00000494776 KLHL15Q96M94 604 aa14.34□□□□□ -0.11
LIME1-209ENST00000494776 ARMC7Q9H6L4 198 aa14.34□□□□□ -0.11
LIME1-209ENST00000494776 A4GALTQ9NPC4 353 aa14.34□□□□□ -0.11
LIME1-209ENST00000494776 EXOSC3Q9NQT5 275 aaKnown RBP14.34□□□□□ -0.11
LIME1-209ENST00000494776 SERINC1Q9NRX5 453 aa14.34□□□□□ -0.11
LIME1-209ENST00000494776 PAQR5Q9NXK6 330 aaPredicted RBP14.34□□□□□ -0.11
LIME1-209ENST00000494776 MCTS1Q9ULC4 181 aaKnown RBP14.34□□□□□ -0.11
LIME1-209ENST00000494776 ZNF175Q9Y473 711 aa14.34□□□□□ -0.11
LIME1-209ENST00000494776 NBPF19A0A087WUL8 3843 aa14.34□□□□□ -0.11
LIME1-209ENST00000494776 ARHGAP21Q5T5U3 1957 aa14.33□□□□□ -0.12
LIME1-209ENST00000494776 EEF1E1-BLOC1S5C9J1V9 151 aa14.33□□□□□ -0.12
LIME1-209ENST00000494776 EEF1E1O43324 174 aaKnown RBP14.33□□□□□ -0.12
LIME1-209ENST00000494776 BCAS1O75363 584 aaPredicted RBP14.33□□□□□ -0.12
LIME1-209ENST00000494776 UQCRBP14927 111 aa14.33□□□□□ -0.12
LIME1-209ENST00000494776 IL11P20809 199 aa14.33□□□□□ -0.12
LIME1-209ENST00000494776 RPS4Y1P22090 263 aaKnown RBP14.33□□□□□ -0.12
LIME1-209ENST00000494776 SESN3P58005 492 aa14.33□□□□□ -0.12
LIME1-209ENST00000494776 MERTKQ12866 999 aa14.33□□□□□ -0.12
LIME1-209ENST00000494776 KLF10Q13118 480 aa14.33□□□□□ -0.12
LIME1-209ENST00000494776 SELENBP1Q13228 472 aa14.33□□□□□ -0.12
LIME1-209ENST00000494776 TMEM176BQ3YBM2 270 aaPredicted RBP14.33□□□□□ -0.12
LIME1-209ENST00000494776 MRPL2Q5T653 305 aaKnown RBP14.33□□□□□ -0.12
LIME1-209ENST00000494776 DLEU7Q6UYE1 221 aa14.33□□□□□ -0.12
LIME1-209ENST00000494776 MEX3BQ6ZN04 569 aaKnown RBP14.33□□□□□ -0.12
LIME1-209ENST00000494776 VRK2Q86Y07 508 aa14.33□□□□□ -0.12
LIME1-209ENST00000494776 DPP10Q8N608 796 aa14.33□□□□□ -0.12
LIME1-209ENST00000494776 FAM71CQ8NEG0 241 aa14.33□□□□□ -0.12
LIME1-209ENST00000494776 OR10D3Q8NH80 312 aa14.33□□□□□ -0.12
LIME1-209ENST00000494776 OR2V1Q8NHB1 315 aa14.33□□□□□ -0.12
LIME1-209ENST00000494776 BBS10Q8TAM1 723 aa14.33□□□□□ -0.12
LIME1-209ENST00000494776 CNOT9Q92600 299 aaKnown RBP14.33□□□□□ -0.12
LIME1-209ENST00000494776 SFXN3Q9BWM7 321 aa14.33□□□□□ -0.12
LIME1-209ENST00000494776 TIGARQ9NQ88 270 aa14.33□□□□□ -0.12
LIME1-209ENST00000494776 SAR1AQ9NR31 198 aa14.33□□□□□ -0.12
LIME1-209ENST00000494776 IFT52Q9Y366 437 aa14.33□□□□□ -0.12
LIME1-209ENST00000494776 TRBV5-3A0A0A0MS03 114 aa14.32□□□□□ -0.12
LIME1-209ENST00000494776 A0A0J9YW62 118 aa14.32□□□□□ -0.12
LIME1-209ENST00000494776 CXCL13O43927 109 aa14.32□□□□□ -0.12
LIME1-209ENST00000494776 IL18BPO95998 194 aa14.32□□□□□ -0.12
LIME1-209ENST00000494776 FCGR2AP12318 317 aa14.32□□□□□ -0.12
LIME1-209ENST00000494776 BMP2P12643 396 aa14.32□□□□□ -0.12
LIME1-209ENST00000494776 SLC7A1P30825 629 aa14.32□□□□□ -0.12
LIME1-209ENST00000494776 UQCRC1P31930 480 aa14.32□□□□□ -0.12
LIME1-209ENST00000494776 IDH2P48735 452 aaKnown RBP14.32□□□□□ -0.12
LIME1-209ENST00000494776 ASCL1P50553 236 aa14.32□□□□□ -0.12
LIME1-209ENST00000494776 CARD18P57730 90 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms