RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 CXorf36Q9H7Y0 433 aa11.22□□□□□ -0.61
SKA1-205ENST00000494518 HHATLQ9HCP6 504 aa11.22□□□□□ -0.61
SKA1-205ENST00000494518 TIGARQ9NQ88 270 aa11.22□□□□□ -0.61
SKA1-205ENST00000494518 GDF2Q9UK05 429 aaPredicted RBP11.22□□□□□ -0.61
SKA1-205ENST00000494518 ICAM5Q9UMF0 924 aa11.22□□□□□ -0.61
SKA1-205ENST00000494518 LIPT1Q9Y234 373 aa11.22□□□□□ -0.61
SKA1-205ENST00000494518 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.21□□□□□ -0.61
SKA1-205ENST00000494518 DPRXA6NFQ7 191 aa11.21□□□□□ -0.61
SKA1-205ENST00000494518 ZNF814B7Z6K7 855 aa11.21□□□□□ -0.61
SKA1-205ENST00000494518 OVOL3O00110 214 aa11.21□□□□□ -0.61
SKA1-205ENST00000494518 RAMP1O60894 148 aa11.21□□□□□ -0.61
SKA1-205ENST00000494518 ADAM11O75078 769 aa11.21□□□□□ -0.61
SKA1-205ENST00000494518 PEX11AO75192 247 aa11.21□□□□□ -0.61
SKA1-205ENST00000494518 CYP7B1O75881 506 aa11.21□□□□□ -0.61
SKA1-205ENST00000494518 PRKD3O94806 890 aa11.21□□□□□ -0.61
SKA1-205ENST00000494518 IGHV4-39P01824 125 aa11.21□□□□□ -0.61
SKA1-205ENST00000494518 YES1P07947 543 aa11.21□□□□□ -0.61
SKA1-205ENST00000494518 DANCRP0C864 163 aa11.21□□□□□ -0.61
SKA1-205ENST00000494518 PRKCAP17252 672 aa11.21□□□□□ -0.61
SKA1-205ENST00000494518 ELK4P28324 431 aa11.21□□□□□ -0.61
SKA1-205ENST00000494518 SLC7A1P30825 629 aa11.21□□□□□ -0.61
SKA1-205ENST00000494518 LCN1P31025 176 aa11.21□□□□□ -0.61
SKA1-205ENST00000494518 SOAT1P35610 550 aa11.21□□□□□ -0.61
SKA1-205ENST00000494518 CCT3P49368 545 aaKnown RBP11.21□□□□□ -0.61
SKA1-205ENST00000494518 P2RX1P51575 399 aa11.21□□□□□ -0.61
SKA1-205ENST00000494518 RPS26P62854 115 aaKnown RBP11.21□□□□□ -0.61
SKA1-205ENST00000494518 ZNF672Q499Z4 452 aaPredicted RBP11.21□□□□□ -0.61
SKA1-205ENST00000494518 KLHL26Q53HC5 615 aa11.21□□□□□ -0.61
SKA1-205ENST00000494518 SEZ6L2Q6UXD5 910 aa11.21□□□□□ -0.61
SKA1-205ENST00000494518 THSD4Q6ZMP0 1018 aa11.21□□□□□ -0.61
SKA1-205ENST00000494518 ZCCHC23Q6ZST2 131 aa11.21□□□□□ -0.61
SKA1-205ENST00000494518 R3HCC1LQ7Z5L2 792 aaKnown RBP11.21□□□□□ -0.61
SKA1-205ENST00000494518 KRTCAP2Q8N6L1 136 aa11.21□□□□□ -0.61
SKA1-205ENST00000494518 ZNF527Q8NB42 609 aa11.21□□□□□ -0.61
SKA1-205ENST00000494518 OR5D16Q8NGK9 328 aa11.21□□□□□ -0.61
SKA1-205ENST00000494518 GPR119Q8TDV5 335 aa11.21□□□□□ -0.61
SKA1-205ENST00000494518 ADAMTS15Q8TE58 950 aa11.21□□□□□ -0.61
SKA1-205ENST00000494518 ZNF300Q96RE9 604 aaPredicted RBP11.21□□□□□ -0.61
SKA1-205ENST00000494518 STACQ99469 402 aa11.21□□□□□ -0.61
SKA1-205ENST00000494518 MECRQ9BV79 373 aa11.21□□□□□ -0.61
SKA1-205ENST00000494518 ACTRT3Q9BYD9 372 aa11.21□□□□□ -0.61
SKA1-205ENST00000494518 REG4Q9BYZ8 158 aa11.21□□□□□ -0.61
SKA1-205ENST00000494518 QRSL1Q9H0R6 528 aaKnown RBP11.21□□□□□ -0.61
SKA1-205ENST00000494518 SLCO5A1Q9H2Y9 848 aa11.21□□□□□ -0.61
SKA1-205ENST00000494518 DUSP22Q9NRW4 184 aa11.21□□□□□ -0.61
SKA1-205ENST00000494518 ATP6V1HQ9UI12 483 aa11.21□□□□□ -0.61
SKA1-205ENST00000494518 ING1Q9UK53 422 aaPredicted RBP11.21□□□□□ -0.61
SKA1-205ENST00000494518 FAF1Q9UNN5 650 aaPredicted RBP11.21□□□□□ -0.61
SKA1-205ENST00000494518 TMED5Q9Y3A6 229 aa11.21□□□□□ -0.61
SKA1-205ENST00000494518 CENPVL1A0A0U1RR11 272 aa11.2□□□□□ -0.62
SKA1-205ENST00000494518 GJE1A6NN92 205 aa11.2□□□□□ -0.62
SKA1-205ENST00000494518 H3BNH8 94 aa11.2□□□□□ -0.62
SKA1-205ENST00000494518 CFLARO15519 480 aa11.2□□□□□ -0.62
SKA1-205ENST00000494518 TRIM13O60858 407 aa11.2□□□□□ -0.62
SKA1-205ENST00000494518 SKAP2O75563 359 aaPredicted RBP11.2□□□□□ -0.62
SKA1-205ENST00000494518 SLU7O95391 586 aaKnown RBP11.2□□□□□ -0.62
SKA1-205ENST00000494518 H6PDO95479 791 aa11.2□□□□□ -0.62
SKA1-205ENST00000494518 ADH6P28332 368 aa11.2□□□□□ -0.62
SKA1-205ENST00000494518 ALDH3A1P30838 453 aa11.2□□□□□ -0.62
SKA1-205ENST00000494518 IDUAP35475 653 aa11.2□□□□□ -0.62
SKA1-205ENST00000494518 C21orf58P58505 322 aa11.2□□□□□ -0.62
SKA1-205ENST00000494518 ITGADQ13349 1161 aa11.2□□□□□ -0.62
SKA1-205ENST00000494518 QPRTQ15274 297 aa11.2□□□□□ -0.62
SKA1-205ENST00000494518 PGGHGQ32M88 737 aa11.2□□□□□ -0.62
SKA1-205ENST00000494518 PDZK1Q5T2W1 519 aa11.2□□□□□ -0.62
SKA1-205ENST00000494518 MTERF4Q7Z6M4 381 aaKnown RBP11.2□□□□□ -0.62
SKA1-205ENST00000494518 CLEC4FQ8N1N0 589 aa11.2□□□□□ -0.62
SKA1-205ENST00000494518 OR56A1Q8NGH5 318 aa11.2□□□□□ -0.62
SKA1-205ENST00000494518 PIWIL2Q8TC59 973 aaKnown RBP11.2□□□□□ -0.62
SKA1-205ENST00000494518 HSD17B8Q92506 261 aa11.2□□□□□ -0.62
SKA1-205ENST00000494518 MTERF3Q96E29 417 aa11.2□□□□□ -0.62
SKA1-205ENST00000494518 C3orf30Q96M34 536 aa11.2□□□□□ -0.62
SKA1-205ENST00000494518 OR5B2Q96R09 309 aa11.2□□□□□ -0.62
SKA1-205ENST00000494518 OR7D2Q96RA2 312 aa11.2□□□□□ -0.62
SKA1-205ENST00000494518 PSD2Q9BQI7 771 aa11.2□□□□□ -0.62
SKA1-205ENST00000494518 HDHD5Q9BXW7 423 aa11.2□□□□□ -0.62
SKA1-205ENST00000494518 POTEKPQ9BYX7 375 aa11.2□□□□□ -0.62
SKA1-205ENST00000494518 NGBQ9NPG2 151 aa11.2□□□□□ -0.62
SKA1-205ENST00000494518 YAE1D1Q9NRH1 226 aa11.2□□□□□ -0.62
SKA1-205ENST00000494518 GPATCH2Q9NW75 528 aa11.2□□□□□ -0.62
SKA1-205ENST00000494518 TRAF6Q9Y4K3 522 aa11.2□□□□□ -0.62
SKA1-205ENST00000494518 GPC6Q9Y625 555 aaPredicted RBP11.2□□□□□ -0.62
SKA1-205ENST00000494518 MALRD1Q5VYJ5 2156 aa11.2□□□□□ -0.62
SKA1-205ENST00000494518 TLDC2A0PJX2 215 aa11.19□□□□□ -0.62
SKA1-205ENST00000494518 TMEM114B3SHH9 223 aa11.19□□□□□ -0.62
SKA1-205ENST00000494518 KIF2AO00139 706 aaPredicted RBP11.19□□□□□ -0.62
SKA1-205ENST00000494518 SMAD9O15198 467 aaKnown RBP11.19□□□□□ -0.62
SKA1-205ENST00000494518 TMCC2O75069 709 aa11.19□□□□□ -0.62
SKA1-205ENST00000494518 HSPA4LO95757 839 aa11.19□□□□□ -0.62
SKA1-205ENST00000494518 IGHV3-9P01782 118 aa11.19□□□□□ -0.62
SKA1-205ENST00000494518 TP53P04637 393 aaPredicted RBP11.19□□□□□ -0.62
SKA1-205ENST00000494518 UBL4AP11441 157 aa11.19□□□□□ -0.62
SKA1-205ENST00000494518 ATP12AP54707 1039 aa11.19□□□□□ -0.62
SKA1-205ENST00000494518 CASP9P55211 416 aa11.19□□□□□ -0.62
SKA1-205ENST00000494518 CDH11P55287 796 aa11.19□□□□□ -0.62
SKA1-205ENST00000494518 SUMO3P55854 103 aaPredicted RBP11.19□□□□□ -0.62
SKA1-205ENST00000494518 RASGEF1BQ0VAM2 473 aa11.19□□□□□ -0.62
SKA1-205ENST00000494518 SELENBP1Q13228 472 aa11.19□□□□□ -0.62
SKA1-205ENST00000494518 MLC1Q15049 377 aa11.19□□□□□ -0.62
SKA1-205ENST00000494518 PPA1Q15181 289 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms