RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 DNAJB12Q9NXW2 375 aaKnown RBP11.28□□□□□ -0.6
TRA2A-209ENST00000494255 MEMO1Q9Y316 297 aa11.28□□□□□ -0.6
TRA2A-209ENST00000494255 ZNF337Q9Y3M9 751 aa11.28□□□□□ -0.6
TRA2A-209ENST00000494255 AP4B1Q9Y6B7 739 aa11.28□□□□□ -0.6
TRA2A-209ENST00000494255 CDHR4A6H8M9 788 aa11.27□□□□□ -0.6
TRA2A-209ENST00000494255 CFAP73A6NFT4 308 aa11.27□□□□□ -0.6
TRA2A-209ENST00000494255 FAM220BPB1ANY3 271 aa11.27□□□□□ -0.6
TRA2A-209ENST00000494255 SHISA8B8ZZ34 492 aa11.27□□□□□ -0.6
TRA2A-209ENST00000494255 DNAJA2O60884 412 aa11.27□□□□□ -0.6
TRA2A-209ENST00000494255 BCAS1O75363 584 aaPredicted RBP11.27□□□□□ -0.6
TRA2A-209ENST00000494255 GP1BBP13224 206 aa11.27□□□□□ -0.6
TRA2A-209ENST00000494255 ELK4P28324 431 aa11.27□□□□□ -0.6
TRA2A-209ENST00000494255 ADH6P28332 368 aa11.27□□□□□ -0.6
TRA2A-209ENST00000494255 PRKAR1BP31321 381 aa11.27□□□□□ -0.6
TRA2A-209ENST00000494255 GZMMP51124 257 aa11.27□□□□□ -0.6
TRA2A-209ENST00000494255 MNAT1P51948 309 aa11.27□□□□□ -0.6
TRA2A-209ENST00000494255 SLC7A2P52569 658 aa11.27□□□□□ -0.6
TRA2A-209ENST00000494255 EEF1A1P68104 462 aaKnown RBP11.27□□□□□ -0.6
TRA2A-209ENST00000494255 TOMM34Q15785 309 aaPredicted RBP11.27□□□□□ -0.6
TRA2A-209ENST00000494255 TMEM44Q2T9K0 475 aa11.27□□□□□ -0.6
TRA2A-209ENST00000494255 C1orf185Q5T7R7 199 aa11.27□□□□□ -0.6
TRA2A-209ENST00000494255 CHMP1BQ7LBR1 199 aa11.27□□□□□ -0.6
TRA2A-209ENST00000494255 ZNF550Q7Z398 422 aa11.27□□□□□ -0.6
TRA2A-209ENST00000494255 PATL1Q86TB9 770 aaKnown RBP11.27□□□□□ -0.6
TRA2A-209ENST00000494255 CALHM3Q86XJ0 350 aa11.27□□□□□ -0.6
TRA2A-209ENST00000494255 GRAMD2AQ8IUY3 354 aa11.27□□□□□ -0.6
TRA2A-209ENST00000494255 MEIOBQ8N635 442 aa11.27□□□□□ -0.6
TRA2A-209ENST00000494255 BHLHE22Q8NFJ8 381 aaPredicted RBP11.27□□□□□ -0.6
TRA2A-209ENST00000494255 FBXO27Q8NI29 283 aa11.27□□□□□ -0.6
TRA2A-209ENST00000494255 GPATCH1Q9BRR8 931 aaKnown RBP11.27□□□□□ -0.6
TRA2A-209ENST00000494255 ERRFI1Q9UJM3 462 aaPredicted RBP11.27□□□□□ -0.6
TRA2A-209ENST00000494255 SLC13A4Q9UKG4 626 aa11.27□□□□□ -0.6
TRA2A-209ENST00000494255 HEATR5AQ86XA9 2040 aa11.27□□□□□ -0.6
TRA2A-209ENST00000494255 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.27□□□□□ -0.61
TRA2A-209ENST00000494255 CCT8L1PA6NM43 557 aa11.27□□□□□ -0.61
TRA2A-209ENST00000494255 ZNF708P17019 499 aa11.27□□□□□ -0.61
TRA2A-209ENST00000494255 PRKCAP17252 672 aa11.27□□□□□ -0.61
TRA2A-209ENST00000494255 CLDN18P56856 261 aa11.27□□□□□ -0.61
TRA2A-209ENST00000494255 EEFSECP57772 596 aaKnown RBP11.27□□□□□ -0.61
TRA2A-209ENST00000494255 PSME3P61289 254 aa11.27□□□□□ -0.61
TRA2A-209ENST00000494255 MXRA7P84157 204 aa11.27□□□□□ -0.61
TRA2A-209ENST00000494255 KRT72Q14CN4 511 aa11.27□□□□□ -0.61
TRA2A-209ENST00000494255 DHRS4L2Q6PKH6 230 aa11.27□□□□□ -0.61
TRA2A-209ENST00000494255 B3GNT6Q6ZMB0 384 aa11.27□□□□□ -0.61
TRA2A-209ENST00000494255 ARMC8Q8IUR7 673 aa11.27□□□□□ -0.61
TRA2A-209ENST00000494255 SLC15A3Q8IY34 581 aa11.27□□□□□ -0.61
TRA2A-209ENST00000494255 UBQLNLQ8IYU4 475 aa11.27□□□□□ -0.61
TRA2A-209ENST00000494255 CLIP4Q8N3C7 705 aa11.27□□□□□ -0.61
TRA2A-209ENST00000494255 FITM2Q8N6M3 262 aa11.27□□□□□ -0.61
TRA2A-209ENST00000494255 OR2T12Q8NG77 320 aa11.27□□□□□ -0.61
TRA2A-209ENST00000494255 SLC26A7Q8TE54 656 aa11.27□□□□□ -0.61
TRA2A-209ENST00000494255 SSC4DQ8WTU2 575 aa11.27□□□□□ -0.61
TRA2A-209ENST00000494255 PHF10Q8WUB8 498 aaKnown RBP11.27□□□□□ -0.61
TRA2A-209ENST00000494255 ZNF583Q96ND8 569 aa11.27□□□□□ -0.61
TRA2A-209ENST00000494255 ACER3Q9NUN7 267 aa11.27□□□□□ -0.61
TRA2A-209ENST00000494255 RLIMQ9NVW2 624 aa11.27□□□□□ -0.61
TRA2A-209ENST00000494255 CMTM6Q9NX76 183 aa11.27□□□□□ -0.61
TRA2A-209ENST00000494255 KLHL28Q9NXS3 571 aa11.27□□□□□ -0.61
TRA2A-209ENST00000494255 PRDM4Q9UKN5 801 aa11.27□□□□□ -0.61
TRA2A-209ENST00000494255 SEC14L5O43304 696 aa11.26□□□□□ -0.61
TRA2A-209ENST00000494255 SMSP52788 366 aa11.26□□□□□ -0.61
TRA2A-209ENST00000494255 PCBP3P57721 371 aaKnown RBP11.26□□□□□ -0.61
TRA2A-209ENST00000494255 SESN3P58005 492 aa11.26□□□□□ -0.61
TRA2A-209ENST00000494255 RPS3AP61247 264 aaKnown RBP11.26□□□□□ -0.61
TRA2A-209ENST00000494255 RAC1P63000 192 aa11.26□□□□□ -0.61
TRA2A-209ENST00000494255 PLAURQ03405 335 aa11.26□□□□□ -0.61
TRA2A-209ENST00000494255 MERTKQ12866 999 aa11.26□□□□□ -0.61
TRA2A-209ENST00000494255 EPS8Q12929 822 aa11.26□□□□□ -0.61
TRA2A-209ENST00000494255 SLC25A53Q5H9E4 307 aa11.26□□□□□ -0.61
TRA2A-209ENST00000494255 C8orf82Q6P1X6 216 aaPredicted RBP11.26□□□□□ -0.61
TRA2A-209ENST00000494255 MICU2Q8IYU8 434 aa11.26□□□□□ -0.61
TRA2A-209ENST00000494255 POC1BQ8TC44 478 aa11.26□□□□□ -0.61
TRA2A-209ENST00000494255 ZPLD1Q8TCW7 415 aa11.26□□□□□ -0.61
TRA2A-209ENST00000494255 SLC35B4Q969S0 331 aa11.26□□□□□ -0.61
TRA2A-209ENST00000494255 CCDC120Q96HB5 630 aa11.26□□□□□ -0.61
TRA2A-209ENST00000494255 DMRTA2Q96SC8 542 aa11.26□□□□□ -0.61
TRA2A-209ENST00000494255 NPAS1Q99742 590 aa11.26□□□□□ -0.61
TRA2A-209ENST00000494255 PINK1Q9BXM7 581 aa11.26□□□□□ -0.61
TRA2A-209ENST00000494255 SERINC1Q9NRX5 453 aa11.26□□□□□ -0.61
TRA2A-209ENST00000494255 NDE1Q9NXR1 346 aa11.26□□□□□ -0.61
TRA2A-209ENST00000494255 MED12Q93074 2177 aa11.25□□□□□ -0.61
TRA2A-209ENST00000494255 MYO7BQ6PIF6 2116 aa11.25□□□□□ -0.61
TRA2A-209ENST00000494255 ELOVL7A1L3X0 281 aa11.25□□□□□ -0.61
TRA2A-209ENST00000494255 CLEC18AA5D8T8 446 aa11.25□□□□□ -0.61
TRA2A-209ENST00000494255 GJE1A6NN92 205 aa11.25□□□□□ -0.61
TRA2A-209ENST00000494255 M0QX08 132 aa11.25□□□□□ -0.61
TRA2A-209ENST00000494255 FAAHO00519 579 aa11.25□□□□□ -0.61
TRA2A-209ENST00000494255 AP3D1O14617 1153 aa11.25□□□□□ -0.61
TRA2A-209ENST00000494255 MFN2O95140 757 aa11.25□□□□□ -0.61
TRA2A-209ENST00000494255 IFNA14P01570 189 aa11.25□□□□□ -0.61
TRA2A-209ENST00000494255 GKN3PP0CG01 181 aa11.25□□□□□ -0.61
TRA2A-209ENST00000494255 PSMA4P25789 261 aaKnown RBP11.25□□□□□ -0.61
TRA2A-209ENST00000494255 HTR3AP46098 478 aa11.25□□□□□ -0.61
TRA2A-209ENST00000494255 IDH2P48735 452 aaKnown RBP11.25□□□□□ -0.61
TRA2A-209ENST00000494255 COPZ1P61923 177 aa11.25□□□□□ -0.61
TRA2A-209ENST00000494255 LIPEQ05469 1076 aa11.25□□□□□ -0.61
TRA2A-209ENST00000494255 SRSF1Q07955 248 aaKnown RBP eCLIP11.25□□□□□ -0.612e-9■□□□□ 10.2
TRA2A-209ENST00000494255 SELENBP1Q13228 472 aa11.25□□□□□ -0.61
TRA2A-209ENST00000494255 VEZF1Q14119 521 aa11.25□□□□□ -0.61
TRA2A-209ENST00000494255 ACSF3Q4G176 576 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms