RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 TEX10Q9NXF1 929 aaPredicted RBP17.95■□□□□ 0.46
COL27A1-207ENST00000494090 GALR3O60755 368 aaPredicted RBP17.95■□□□□ 0.46
COL27A1-207ENST00000494090 CNOT4O95628 575 aaKnown RBP17.95■□□□□ 0.46
COL27A1-207ENST00000494090 UGT2B7P16662 529 aa17.95■□□□□ 0.46
COL27A1-207ENST00000494090 PGGHGQ32M88 737 aa17.95■□□□□ 0.46
COL27A1-207ENST00000494090 MEPCEQ7L2J0 689 aaKnown RBP17.95■□□□□ 0.46
COL27A1-207ENST00000494090 OR5L1Q8NGL2 311 aa17.95■□□□□ 0.46
COL27A1-207ENST00000494090 PHB2Q99623 299 aa17.95■□□□□ 0.46
COL27A1-207ENST00000494090 OR52D1Q9H346 318 aa17.95■□□□□ 0.46
COL27A1-207ENST00000494090 USP36Q9P275 1121 aaKnown RBP17.95■□□□□ 0.46
COL27A1-207ENST00000494090 HMX3A6NHT5 357 aa17.94■□□□□ 0.46
COL27A1-207ENST00000494090 H3BML4 177 aa17.94■□□□□ 0.46
COL27A1-207ENST00000494090 ACOT8O14734 319 aa17.94■□□□□ 0.46
COL27A1-207ENST00000494090 EGFP01133 1207 aa17.94■□□□□ 0.46
COL27A1-207ENST00000494090 SLC2A5P22732 501 aa17.94■□□□□ 0.46
COL27A1-207ENST00000494090 DEFB103AP81534 67 aa17.94■□□□□ 0.46
COL27A1-207ENST00000494090 SDR9C7Q8NEX9 313 aa17.94■□□□□ 0.46
COL27A1-207ENST00000494090 RAB39BQ96DA2 213 aa17.94■□□□□ 0.46
COL27A1-207ENST00000494090 PLEKHA3Q9HB20 300 aa17.94■□□□□ 0.46
COL27A1-207ENST00000494090 SLC22A7Q9Y694 548 aa17.94■□□□□ 0.46
COL27A1-207ENST00000494090 FAM171A2A8MVW0 826 aa17.94■□□□□ 0.46
COL27A1-207ENST00000494090 H3BQ06 376 aaPredicted RBP17.94■□□□□ 0.46
COL27A1-207ENST00000494090 ICAM2P13598 275 aa17.94■□□□□ 0.46
COL27A1-207ENST00000494090 POU3F2P20265 443 aaPredicted RBP17.94■□□□□ 0.46
COL27A1-207ENST00000494090 TUBG1P23258 451 aa17.94■□□□□ 0.46
COL27A1-207ENST00000494090 HNRNPFP52597 415 aaKnown RBP17.94■□□□□ 0.46
COL27A1-207ENST00000494090 RBPJQ06330 500 aa17.94■□□□□ 0.46
COL27A1-207ENST00000494090 ENTPD8Q5MY95 495 aa17.94■□□□□ 0.46
COL27A1-207ENST00000494090 WBP2NLQ6ICG8 309 aa17.94■□□□□ 0.46
COL27A1-207ENST00000494090 COMMD7Q86VX2 200 aa17.94■□□□□ 0.46
COL27A1-207ENST00000494090 PPP1R3BQ86XI6 285 aa17.94■□□□□ 0.46
COL27A1-207ENST00000494090 TBC1D15Q8TC07 691 aa17.94■□□□□ 0.46
COL27A1-207ENST00000494090 HINT2Q9BX68 163 aa17.94■□□□□ 0.46
COL27A1-207ENST00000494090 EIF5A2Q9GZV4 153 aaKnown RBP17.94■□□□□ 0.46
COL27A1-207ENST00000494090 ZNF705EA8MWA4 302 aaPredicted RBP17.94■□□□□ 0.46
COL27A1-207ENST00000494090 TFP02787 698 aa17.94■□□□□ 0.46
COL27A1-207ENST00000494090 SERPINA5P05154 406 aa17.94■□□□□ 0.46
COL27A1-207ENST00000494090 RNF175Q8N4F7 328 aa17.94■□□□□ 0.46
COL27A1-207ENST00000494090 KCMF1Q9P0J7 381 aa17.94■□□□□ 0.46
COL27A1-207ENST00000494090 ZNF443Q9Y2A4 671 aaPredicted RBP17.94■□□□□ 0.46
COL27A1-207ENST00000494090 SGSHP51688 502 aa17.94■□□□□ 0.46
COL27A1-207ENST00000494090 ZNF169Q14929 603 aaPredicted RBP17.94■□□□□ 0.46
COL27A1-207ENST00000494090 PELI3Q8N2H9 469 aa17.94■□□□□ 0.46
COL27A1-207ENST00000494090 ZNF337Q9Y3M9 751 aa17.94■□□□□ 0.46
COL27A1-207ENST00000494090 GPR75O95800 540 aa17.93■□□□□ 0.46
COL27A1-207ENST00000494090 TNFSF8P32971 234 aa17.93■□□□□ 0.46
COL27A1-207ENST00000494090 CLDN2P57739 230 aa17.93■□□□□ 0.46
COL27A1-207ENST00000494090 SEMA3BQ13214 749 aa17.93■□□□□ 0.46
COL27A1-207ENST00000494090 UBQLN4Q9NRR5 601 aa17.93■□□□□ 0.46
COL27A1-207ENST00000494090 BABAM2Q9NXR7 383 aa17.93■□□□□ 0.46
COL27A1-207ENST00000494090 CBLCQ9ULV8 474 aa17.93■□□□□ 0.46
COL27A1-207ENST00000494090 CRTAPO75718 401 aaPredicted RBP17.93■□□□□ 0.46
COL27A1-207ENST00000494090 CD79AP11912 226 aa17.93■□□□□ 0.46
COL27A1-207ENST00000494090 HLA-FP30511 346 aa17.93■□□□□ 0.46
COL27A1-207ENST00000494090 NR4A2P43354 598 aa17.93■□□□□ 0.46
COL27A1-207ENST00000494090 CTBSQ01459 385 aa17.93■□□□□ 0.46
COL27A1-207ENST00000494090 BDH1Q02338 343 aa17.93■□□□□ 0.46
COL27A1-207ENST00000494090 FGFBP1Q14512 234 aa17.93■□□□□ 0.46
COL27A1-207ENST00000494090 WDR53Q7Z5U6 358 aaPredicted RBP17.93■□□□□ 0.46
COL27A1-207ENST00000494090 OR52R1Q8NGF1 315 aa17.93■□□□□ 0.46
COL27A1-207ENST00000494090 GLYATL2Q8WU03 294 aa17.93■□□□□ 0.46
COL27A1-207ENST00000494090 BOKQ9UMX3 212 aaPredicted RBP17.93■□□□□ 0.46
COL27A1-207ENST00000494090 SYPL1Q16563 259 aa17.93■□□□□ 0.46
COL27A1-207ENST00000494090 L3MBTL4Q8NA19 623 aa17.93■□□□□ 0.46
COL27A1-207ENST00000494090 OR51J1Q9H342 316 aa17.93■□□□□ 0.46
COL27A1-207ENST00000494090 USP22Q9UPT9 525 aa17.93■□□□□ 0.46
COL27A1-207ENST00000494090 MPPED1O15442 326 aa17.93■□□□□ 0.46
COL27A1-207ENST00000494090 RFPL3O75679 317 aa17.93■□□□□ 0.46
COL27A1-207ENST00000494090 SSTR4P31391 388 aa17.93■□□□□ 0.46
COL27A1-207ENST00000494090 DAPP51397 102 aa17.93■□□□□ 0.46
COL27A1-207ENST00000494090 RPP30P78346 268 aaKnown RBP17.93■□□□□ 0.46
COL27A1-207ENST00000494090 SMN1Q16637 294 aaKnown RBP17.93■□□□□ 0.46
COL27A1-207ENST00000494090 MEX3DQ86XN8 651 aaKnown RBP17.93■□□□□ 0.46
COL27A1-207ENST00000494090 PTRH1Q86Y79 214 aaKnown RBP17.93■□□□□ 0.46
COL27A1-207ENST00000494090 NLGN4YQ8NFZ3 816 aaPredicted RBP17.93■□□□□ 0.46
COL27A1-207ENST00000494090 TCTN2Q96GX1 697 aa17.93■□□□□ 0.46
COL27A1-207ENST00000494090 CCNL2Q96S94 520 aaPredicted RBP17.93■□□□□ 0.46
COL27A1-207ENST00000494090 A0A1B0GVG6 124 aa17.92■□□□□ 0.46
COL27A1-207ENST00000494090 MEIOCA2RUB1 952 aa17.92■□□□□ 0.46
COL27A1-207ENST00000494090 F5H5P2 479 aa17.92■□□□□ 0.46
COL27A1-207ENST00000494090 PTHP01270 115 aa17.92■□□□□ 0.46
COL27A1-207ENST00000494090 Q6ZSR9 355 aa17.92■□□□□ 0.46
COL27A1-207ENST00000494090 ZNF595Q8IYB9 648 aa17.92■□□□□ 0.46
COL27A1-207ENST00000494090 DNAJC22Q8N4W6 341 aa17.92■□□□□ 0.46
COL27A1-207ENST00000494090 NAA50Q9GZZ1 169 aaKnown RBP17.92■□□□□ 0.46
COL27A1-207ENST00000494090 ZNF334Q9HCZ1 680 aaPredicted RBP17.92■□□□□ 0.46
COL27A1-207ENST00000494090 J3KTA2 159 aa17.92■□□□□ 0.46
COL27A1-207ENST00000494090 HPGDSO60760 199 aa17.92■□□□□ 0.46
COL27A1-207ENST00000494090 SLC22A5O76082 557 aa17.92■□□□□ 0.46
COL27A1-207ENST00000494090 NUDT7P0C024 238 aa17.92■□□□□ 0.46
COL27A1-207ENST00000494090 ZNF26P17031 533 aaPredicted RBP17.92■□□□□ 0.46
COL27A1-207ENST00000494090 GIPRP48546 466 aa17.92■□□□□ 0.46
COL27A1-207ENST00000494090 OR7A5Q15622 319 aa17.92■□□□□ 0.46
COL27A1-207ENST00000494090 SGPP2Q8IWX5 399 aa17.92■□□□□ 0.46
COL27A1-207ENST00000494090 SLC2A12Q8TD20 617 aa17.92■□□□□ 0.46
COL27A1-207ENST00000494090 ADAMTS14Q8WXS8 1223 aa17.92■□□□□ 0.46
COL27A1-207ENST00000494090 FAM71F1Q96KD3 344 aaPredicted RBP17.92■□□□□ 0.46
COL27A1-207ENST00000494090 COQ10AQ96MF6 247 aa17.92■□□□□ 0.46
COL27A1-207ENST00000494090 MACROD1Q9BQ69 325 aa17.92■□□□□ 0.46
COL27A1-207ENST00000494090 ENKD1Q9H0I2 346 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms