RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 OR1Q1Q15612 314 aa17.63■□□□□ 0.41
USP39-218ENST00000493829 AAGABQ6PD74 315 aa17.63■□□□□ 0.41
USP39-218ENST00000493829 POMZP3Q6PJE2 187 aa17.63■□□□□ 0.41
USP39-218ENST00000493829 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.63■□□□□ 0.41
USP39-218ENST00000493829 AMIGO2Q86SJ2 522 aa17.63■□□□□ 0.41
USP39-218ENST00000493829 TMEM178AQ8NBL3 297 aa17.63■□□□□ 0.41
USP39-218ENST00000493829 ADAMTS16Q8TE57 1224 aa17.63■□□□□ 0.41
USP39-218ENST00000493829 PHF10Q8WUB8 498 aaKnown RBP17.63■□□□□ 0.41
USP39-218ENST00000493829 PRRC1Q96M27 445 aa17.63■□□□□ 0.41
USP39-218ENST00000493829 PIP5K1AQ99755 562 aa17.63■□□□□ 0.41
USP39-218ENST00000493829 PKP2Q99959 881 aa17.63■□□□□ 0.41
USP39-218ENST00000493829 ZNF559Q9BR84 538 aa17.63■□□□□ 0.41
USP39-218ENST00000493829 PRORYQ9H606 182 aa17.63■□□□□ 0.41
USP39-218ENST00000493829 VNN3Q9NY84 501 aa17.63■□□□□ 0.41
USP39-218ENST00000493829 LUZP4Q9P127 313 aa17.63■□□□□ 0.41
USP39-218ENST00000493829 RPS6KB2Q9UBS0 482 aa17.63■□□□□ 0.41
USP39-218ENST00000493829 A4GNTQ9UNA3 340 aa17.63■□□□□ 0.41
USP39-218ENST00000493829 HEATR5AQ86XA9 2040 aa17.62■□□□□ 0.41
USP39-218ENST00000493829 TRAV17A0A0B4J275 112 aa17.62■□□□□ 0.41
USP39-218ENST00000493829 ANKUB1A6NFN9 424 aa17.62■□□□□ 0.41
USP39-218ENST00000493829 FAM166BA8MTA8 275 aa17.62■□□□□ 0.41
USP39-218ENST00000493829 SHISA8B8ZZ34 492 aa17.62■□□□□ 0.41
USP39-218ENST00000493829 GNGT2O14610 69 aa17.62■□□□□ 0.41
USP39-218ENST00000493829 HNRNPRO43390 633 aaKnown RBP17.62■□□□□ 0.41
USP39-218ENST00000493829 UQCRBP14927 111 aa17.62■□□□□ 0.41
USP39-218ENST00000493829 RRM2P31350 389 aa17.62■□□□□ 0.41
USP39-218ENST00000493829 ZNF41P51814 821 aaPredicted RBP17.62■□□□□ 0.41
USP39-218ENST00000493829 CDH12P55289 794 aa17.62■□□□□ 0.41
USP39-218ENST00000493829 SESN3P58005 492 aa17.62■□□□□ 0.41
USP39-218ENST00000493829 COPZ1P61923 177 aa17.62■□□□□ 0.41
USP39-218ENST00000493829 PLGLB1Q02325 96 aa17.62■□□□□ 0.41
USP39-218ENST00000493829 TIGD3Q6B0B8 471 aa17.62■□□□□ 0.41
USP39-218ENST00000493829 HMBOX1Q6NT76 420 aa17.62■□□□□ 0.41
USP39-218ENST00000493829 ASB18Q6ZVZ8 466 aa17.62■□□□□ 0.41
USP39-218ENST00000493829 LILRA2Q8N149 483 aa17.62■□□□□ 0.41
USP39-218ENST00000493829 FADS6Q8N9I5 356 aa17.62■□□□□ 0.41
USP39-218ENST00000493829 OR52J3Q8NH60 311 aa17.62■□□□□ 0.41
USP39-218ENST00000493829 NTNG2Q96CW9 530 aa17.62■□□□□ 0.41
USP39-218ENST00000493829 DKKL1Q9UK85 242 aa17.62■□□□□ 0.41
USP39-218ENST00000493829 BOKQ9UMX3 212 aaPredicted RBP17.62■□□□□ 0.41
USP39-218ENST00000493829 U3KQV3 271 aa17.62■□□□□ 0.41
USP39-218ENST00000493829 DSPP15924 2871 aaKnown RBP17.62■□□□□ 0.41
USP39-218ENST00000493829 IGLV3-32A0A0A0MS00 114 aa17.61■□□□□ 0.41
USP39-218ENST00000493829 A0A1B0GWA3 101 aa17.61■□□□□ 0.41
USP39-218ENST00000493829 CDK2AP1O14519 115 aa17.61■□□□□ 0.41
USP39-218ENST00000493829 WISP1O95388 367 aa17.61■□□□□ 0.41
USP39-218ENST00000493829 RFPL3SP0C7P2 107 aa17.61■□□□□ 0.41
USP39-218ENST00000493829 RHCEP18577 417 aa17.61■□□□□ 0.41
USP39-218ENST00000493829 PGCP20142 388 aa17.61■□□□□ 0.41
USP39-218ENST00000493829 MST1P26927 711 aa17.61■□□□□ 0.41
USP39-218ENST00000493829 IST1P53990 364 aa17.61■□□□□ 0.41
USP39-218ENST00000493829 IGFL3Q6UXB1 125 aa17.61■□□□□ 0.41
USP39-218ENST00000493829 PIWIL3Q7Z3Z3 882 aaKnown RBP17.61■□□□□ 0.41
USP39-218ENST00000493829 C9orf43Q8TAL5 461 aaPredicted RBP17.61■□□□□ 0.41
USP39-218ENST00000493829 GPR119Q8TDV5 335 aa17.61■□□□□ 0.41
USP39-218ENST00000493829 SLC35B4Q969S0 331 aa17.61■□□□□ 0.41
USP39-218ENST00000493829 RELTQ969Z4 430 aa17.61■□□□□ 0.41
USP39-218ENST00000493829 SLC41A3Q96GZ6 507 aa17.61■□□□□ 0.41
USP39-218ENST00000493829 NPAS1Q99742 590 aa17.61■□□□□ 0.41
USP39-218ENST00000493829 FNDC11Q9BVV2 318 aa17.61■□□□□ 0.41
USP39-218ENST00000493829 TMEM27Q9HBJ8 222 aa17.61■□□□□ 0.41
USP39-218ENST00000493829 MED17Q9NVC6 651 aa17.61■□□□□ 0.41
USP39-218ENST00000493829 TAS2R10Q9NYW0 307 aa17.61■□□□□ 0.41
USP39-218ENST00000493829 SLC7A7Q9UM01 511 aa17.61■□□□□ 0.41
USP39-218ENST00000493829 KLRC4-KLRK1H3BQV0 150 aa17.61■□□□□ 0.41
USP39-218ENST00000493829 FASP25445 335 aa17.61■□□□□ 0.41
USP39-218ENST00000493829 ELAVL4P26378 380 aaKnown RBP17.61■□□□□ 0.41
USP39-218ENST00000493829 GDF1P27539 372 aa17.61■□□□□ 0.41
USP39-218ENST00000493829 SUMO3P55854 103 aaPredicted RBP17.61■□□□□ 0.41
USP39-218ENST00000493829 FOXO1Q12778 655 aa17.61■□□□□ 0.41
USP39-218ENST00000493829 ZNF169Q14929 603 aaPredicted RBP17.61■□□□□ 0.41
USP39-218ENST00000493829 FGD3Q5JSP0 725 aa17.61■□□□□ 0.41
USP39-218ENST00000493829 OR2T5Q6IEZ7 315 aa17.61■□□□□ 0.41
USP39-218ENST00000493829 RBMXL3Q8N7X1 1067 aaKnown RBP17.61■□□□□ 0.41
USP39-218ENST00000493829 OR5M1Q8NGP8 315 aa17.61■□□□□ 0.41
USP39-218ENST00000493829 OR2T29Q8NH02 315 aa17.61■□□□□ 0.41
USP39-218ENST00000493829 C1GALT1C1Q96EU7 318 aa17.61■□□□□ 0.41
USP39-218ENST00000493829 ZNF347Q96SE7 839 aa17.61■□□□□ 0.41
USP39-218ENST00000493829 TTTY12Q9BZ98 90 aa17.61■□□□□ 0.41
USP39-218ENST00000493829 TRIM2Q9C040 744 aa17.61■□□□□ 0.41
USP39-218ENST00000493829 PTGES2Q9H7Z7 377 aa17.61■□□□□ 0.41
USP39-218ENST00000493829 EVA1AQ9H8M9 152 aa17.61■□□□□ 0.41
USP39-218ENST00000493829 ZFP64Q9NPA5 681 aa17.61■□□□□ 0.41
USP39-218ENST00000493829 AGPAT4Q9NRZ5 378 aa17.61■□□□□ 0.41
USP39-218ENST00000493829 NKX1-2Q9UD57 310 aaPredicted RBP17.61■□□□□ 0.41
USP39-218ENST00000493829 RPH3AQ9Y2J0 694 aaPredicted RBP17.61■□□□□ 0.41
USP39-218ENST00000493829 C15orf41Q9Y2V0 281 aa17.61■□□□□ 0.41
USP39-218ENST00000493829 CNTRLQ7Z7A1 2325 aa17.6■□□□□ 0.41
USP39-218ENST00000493829 NCKAP5O14513 1909 aa17.6■□□□□ 0.41
USP39-218ENST00000493829 FAM47E-STBD1D6RA91 191 aa17.6■□□□□ 0.41
USP39-218ENST00000493829 CLOCKO15516 846 aa17.6■□□□□ 0.41
USP39-218ENST00000493829 MGRN1O60291 552 aa17.6■□□□□ 0.41
USP39-218ENST00000493829 FMO6PO60774 539 aa17.6■□□□□ 0.41
USP39-218ENST00000493829 PRSS23O95084 383 aa17.6■□□□□ 0.41
USP39-218ENST00000493829 LDLRP01130 860 aa17.6■□□□□ 0.41
USP39-218ENST00000493829 THY1P04216 161 aa17.6■□□□□ 0.41
USP39-218ENST00000493829 FCGR1AP12314 374 aa17.6■□□□□ 0.41
USP39-218ENST00000493829 GP1BBP13224 206 aa17.6■□□□□ 0.41
USP39-218ENST00000493829 ANPEPP15144 967 aa17.6■□□□□ 0.41
USP39-218ENST00000493829 MSX1P28360 303 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms