RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 SENP5Q96HI0 755 aaPredicted RBP11.51□□□□□ -0.57
HMGN1-220ENST00000492280 TNFRSF13CQ96RJ3 184 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 TIMP4Q99727 224 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 LRRC61Q9BV99 259 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 B3GAT2Q9NPZ5 323 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 ZNF346Q9UL40 294 aaKnown RBP11.51□□□□□ -0.57
HMGN1-220ENST00000492280 ADAM18Q9Y3Q7 739 aa11.51□□□□□ -0.57
HMGN1-220ENST00000492280 IQCMA0A1B0GVH7 501 aa11.5□□□□□ -0.57
HMGN1-220ENST00000492280 OR5K3A6NET4 321 aa11.5□□□□□ -0.57
HMGN1-220ENST00000492280 SNTNA6NMZ2 147 aa11.5□□□□□ -0.57
HMGN1-220ENST00000492280 BRINP1O60477 761 aa11.5□□□□□ -0.57
HMGN1-220ENST00000492280 CCNKO75909 580 aa11.5□□□□□ -0.57
HMGN1-220ENST00000492280 IL1AP01583 271 aa11.5□□□□□ -0.57
HMGN1-220ENST00000492280 DBIP07108 87 aaKnown RBP11.5□□□□□ -0.57
HMGN1-220ENST00000492280 BMP7P18075 431 aa11.5□□□□□ -0.57
HMGN1-220ENST00000492280 ZNF10P21506 573 aaPredicted RBP11.5□□□□□ -0.57
HMGN1-220ENST00000492280 HTR1FP30939 366 aa11.5□□□□□ -0.57
HMGN1-220ENST00000492280 ACVR1BP36896 505 aa11.5□□□□□ -0.57
HMGN1-220ENST00000492280 OR10A3P58181 314 aa11.5□□□□□ -0.57
HMGN1-220ENST00000492280 CCINQ13939 588 aa11.5□□□□□ -0.57
HMGN1-220ENST00000492280 DSG2Q14126 1118 aa11.5□□□□□ -0.57
HMGN1-220ENST00000492280 KCNAB1Q14722 419 aa11.5□□□□□ -0.57
HMGN1-220ENST00000492280 CNIH2Q6PI25 160 aa11.5□□□□□ -0.57
HMGN1-220ENST00000492280 TMEM91Q6ZNR0 172 aa11.5□□□□□ -0.57
HMGN1-220ENST00000492280 GDPGP1Q6ZNW5 385 aa11.5□□□□□ -0.57
HMGN1-220ENST00000492280 NCCRP1Q6ZVX7 275 aaPredicted RBP11.5□□□□□ -0.57
HMGN1-220ENST00000492280 RNF44Q7L0R7 432 aa11.5□□□□□ -0.57
HMGN1-220ENST00000492280 PTP4A1Q93096 173 aa11.5□□□□□ -0.57
HMGN1-220ENST00000492280 HS6ST2Q96MM7 605 aa11.5□□□□□ -0.57
HMGN1-220ENST00000492280 KLHDC3Q9BQ90 382 aa11.5□□□□□ -0.57
HMGN1-220ENST00000492280 RNF32Q9H0A6 362 aa11.5□□□□□ -0.57
HMGN1-220ENST00000492280 LRIT1Q9P2V4 623 aa11.5□□□□□ -0.57
HMGN1-220ENST00000492280 SCML1Q9UN30 329 aa11.5□□□□□ -0.57
HMGN1-220ENST00000492280 SPACA6W5XKT8 324 aa11.5□□□□□ -0.57
HMGN1-220ENST00000492280 TTC36A6NLP5 189 aa11.5□□□□□ -0.57
HMGN1-220ENST00000492280 A8MUA0 341 aa11.5□□□□□ -0.57
HMGN1-220ENST00000492280 PSMD9O00233 223 aa11.5□□□□□ -0.57
HMGN1-220ENST00000492280 PLOD3O60568 738 aa11.5□□□□□ -0.57
HMGN1-220ENST00000492280 RPS4Y1P22090 263 aaKnown RBP11.5□□□□□ -0.57
HMGN1-220ENST00000492280 IGFBP4P22692 258 aa11.5□□□□□ -0.57
HMGN1-220ENST00000492280 GRPRP30550 384 aa11.5□□□□□ -0.57
HMGN1-220ENST00000492280 NAA10P41227 235 aaPredicted RBP11.5□□□□□ -0.57
HMGN1-220ENST00000492280 ARFIP1P53367 373 aa11.5□□□□□ -0.57
HMGN1-220ENST00000492280 COPZ1P61923 177 aa11.5□□□□□ -0.57
HMGN1-220ENST00000492280 FOXK2Q01167 660 aa11.5□□□□□ -0.57
HMGN1-220ENST00000492280 GLYR1Q49A26 553 aaPredicted RBP11.5□□□□□ -0.57
HMGN1-220ENST00000492280 EIPR1Q53HC9 387 aa11.5□□□□□ -0.57
HMGN1-220ENST00000492280 RNASE12Q5GAN4 147 aaKnown RBP11.5□□□□□ -0.57
HMGN1-220ENST00000492280 DDI2Q5TDH0 399 aa11.5□□□□□ -0.57
HMGN1-220ENST00000492280 NPSR1Q6W5P4 371 aa11.5□□□□□ -0.57
HMGN1-220ENST00000492280 OOSP2Q86WS3 158 aa11.5□□□□□ -0.57
HMGN1-220ENST00000492280 GJD3Q8N144 294 aa11.5□□□□□ -0.57
HMGN1-220ENST00000492280 ARIH2OSQ8N7S6 290 aa11.5□□□□□ -0.57
HMGN1-220ENST00000492280 ZPLD1Q8TCW7 415 aa11.5□□□□□ -0.57
HMGN1-220ENST00000492280 CAPSLQ8WWF8 208 aa11.5□□□□□ -0.57
HMGN1-220ENST00000492280 RFKQ969G6 155 aa11.5□□□□□ -0.57
HMGN1-220ENST00000492280 ORAI1Q96D31 301 aa11.5□□□□□ -0.57
HMGN1-220ENST00000492280 TXNDC15Q96J42 360 aa11.5□□□□□ -0.57
HMGN1-220ENST00000492280 PRRG3Q9BZD7 231 aa11.5□□□□□ -0.57
HMGN1-220ENST00000492280 POT1Q9NUX5 634 aa11.5□□□□□ -0.57
HMGN1-220ENST00000492280 MMP17Q9ULZ9 603 aa11.5□□□□□ -0.57
HMGN1-220ENST00000492280 ERVK-19Q9WJR5 959 aa11.5□□□□□ -0.57
HMGN1-220ENST00000492280 BOLA1Q9Y3E2 137 aa11.5□□□□□ -0.57
HMGN1-220ENST00000492280 SPTY2D1-AS1A0A0U1RR47 76 aa11.49□□□□□ -0.57
HMGN1-220ENST00000492280 FAM171A2A8MVW0 826 aa11.49□□□□□ -0.57
HMGN1-220ENST00000492280 TNFRSF10CO14798 259 aa11.49□□□□□ -0.57
HMGN1-220ENST00000492280 STX4Q12846 297 aa11.49□□□□□ -0.57
HMGN1-220ENST00000492280 CCDC85BQ15834 202 aaPredicted RBP11.49□□□□□ -0.57
HMGN1-220ENST00000492280 PRPF38BQ5VTL8 546 aaKnown RBP11.49□□□□□ -0.57
HMGN1-220ENST00000492280 NKAIN2Q5VXU1 208 aa11.49□□□□□ -0.57
HMGN1-220ENST00000492280 RNLSQ5VYX0 342 aa11.49□□□□□ -0.57
HMGN1-220ENST00000492280 OTPQ5XKR4 325 aa11.49□□□□□ -0.57
HMGN1-220ENST00000492280 ZNF517Q6ZMY9 492 aaPredicted RBP11.49□□□□□ -0.57
HMGN1-220ENST00000492280 SLC7A5P1Q8MH63 180 aa11.49□□□□□ -0.57
HMGN1-220ENST00000492280 ZNF321PQ8N8H1 164 aa11.49□□□□□ -0.57
HMGN1-220ENST00000492280 OR4K13Q8NH42 304 aa11.49□□□□□ -0.57
HMGN1-220ENST00000492280 EFHD2Q96C19 240 aaPredicted RBP11.49□□□□□ -0.57
HMGN1-220ENST00000492280 ZMYND19Q96E35 227 aaPredicted RBP11.49□□□□□ -0.57
HMGN1-220ENST00000492280 CCDC32Q9BV29 185 aa11.49□□□□□ -0.57
HMGN1-220ENST00000492280 GSDMCQ9BYG8 508 aa11.49□□□□□ -0.57
HMGN1-220ENST00000492280 FOLH1BQ9HBA9 442 aa11.49□□□□□ -0.57
HMGN1-220ENST00000492280 LYRM4Q9HD34 91 aa11.49□□□□□ -0.57
HMGN1-220ENST00000492280 DUSP22Q9NRW4 184 aa11.49□□□□□ -0.57
HMGN1-220ENST00000492280 MRPS18AQ9NVS2 196 aaKnown RBP11.49□□□□□ -0.57
HMGN1-220ENST00000492280 SIGLEC7Q9Y286 467 aa11.49□□□□□ -0.57
HMGN1-220ENST00000492280 A0A0B4J203 849 aa11.49□□□□□ -0.57
HMGN1-220ENST00000492280 J3QLW9 94 aa11.49□□□□□ -0.57
HMGN1-220ENST00000492280 AKAP8O43823 692 aaKnown RBP11.49□□□□□ -0.57
HMGN1-220ENST00000492280 HOXC4P09017 264 aaPredicted RBP11.49□□□□□ -0.57
HMGN1-220ENST00000492280 ZNF19P17023 458 aa11.49□□□□□ -0.57
HMGN1-220ENST00000492280 SHC1P29353 583 aa11.49□□□□□ -0.57
HMGN1-220ENST00000492280 CTBP2P56545 445 aa11.49□□□□□ -0.57
HMGN1-220ENST00000492280 RAB25P57735 213 aa11.49□□□□□ -0.57
HMGN1-220ENST00000492280 OR12D2P58182 307 aa11.49□□□□□ -0.57
HMGN1-220ENST00000492280 IL18Q14116 193 aa11.49□□□□□ -0.57
HMGN1-220ENST00000492280 SF3B4Q15427 424 aaKnown RBP eCLIP11.49□□□□□ -0.572e-7■■■■□ 20.5
HMGN1-220ENST00000492280 AMZ1Q400G9 498 aa11.49□□□□□ -0.57
HMGN1-220ENST00000492280 ALG10BQ5I7T1 473 aa11.49□□□□□ -0.57
HMGN1-220ENST00000492280 KIRREL2Q6UWL6 708 aa11.49□□□□□ -0.57
HMGN1-220ENST00000492280 SMRP1Q8NCR6 262 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms