RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 KLHL26Q53HC5 615 aa11.63□□□□□ -0.55
USF1-206ENST00000491629 IKBIPQ70UQ0 350 aa11.63□□□□□ -0.55
USF1-206ENST00000491629 TRIM46Q7Z4K8 759 aa11.63□□□□□ -0.55
USF1-206ENST00000491629 SLC43A2Q8N370 569 aa11.63□□□□□ -0.55
USF1-206ENST00000491629 MMGT1Q8N4V1 131 aa11.63□□□□□ -0.55
USF1-206ENST00000491629 PHOSPHO1Q8TCT1 267 aa11.63□□□□□ -0.55
USF1-206ENST00000491629 PROX1Q92786 737 aa11.63□□□□□ -0.55
USF1-206ENST00000491629 MUCL1Q96DR8 90 aa11.63□□□□□ -0.55
USF1-206ENST00000491629 SOX7Q9BT81 388 aa11.63□□□□□ -0.55
USF1-206ENST00000491629 CHODLQ9H9P2 273 aa11.63□□□□□ -0.55
USF1-206ENST00000491629 L2HGDHQ9H9P8 463 aa11.63□□□□□ -0.55
USF1-206ENST00000491629 MID1IP1Q9NPA3 183 aa11.63□□□□□ -0.55
USF1-206ENST00000491629 SIRT3Q9NTG7 399 aaPredicted RBP11.63□□□□□ -0.55
USF1-206ENST00000491629 ZNF180Q9UJW8 692 aa11.63□□□□□ -0.55
USF1-206ENST00000491629 CARD8Q9Y2G2 431 aa11.63□□□□□ -0.55
USF1-206ENST00000491629 WBP11Q9Y2W2 641 aaKnown RBP11.63□□□□□ -0.55
USF1-206ENST00000491629 PTGDR2Q9Y5Y4 395 aa11.63□□□□□ -0.55
USF1-206ENST00000491629 ACTL7BQ9Y614 415 aa11.63□□□□□ -0.55
USF1-206ENST00000491629 ETV2O00321 342 aaPredicted RBP11.62□□□□□ -0.55
USF1-206ENST00000491629 SCDO00767 359 aa11.62□□□□□ -0.55
USF1-206ENST00000491629 PDPK1O15530 556 aa11.62□□□□□ -0.55
USF1-206ENST00000491629 RAD51DO75771 328 aa11.62□□□□□ -0.55
USF1-206ENST00000491629 IGHV3-9P01782 118 aa11.62□□□□□ -0.55
USF1-206ENST00000491629 TAC1P20366 129 aa11.62□□□□□ -0.55
USF1-206ENST00000491629 ATP5F1P24539 256 aaPredicted RBP11.62□□□□□ -0.55
USF1-206ENST00000491629 LCN1P31025 176 aa11.62□□□□□ -0.55
USF1-206ENST00000491629 ARL13AQ5H913 290 aaPredicted RBP11.62□□□□□ -0.55
USF1-206ENST00000491629 SLC25A53Q5H9E4 307 aa11.62□□□□□ -0.55
USF1-206ENST00000491629 SLC22A25Q6T423 547 aa11.62□□□□□ -0.55
USF1-206ENST00000491629 ZNF572Q7Z3I7 529 aaPredicted RBP11.62□□□□□ -0.55
USF1-206ENST00000491629 P2RY8Q86VZ1 359 aa11.62□□□□□ -0.55
USF1-206ENST00000491629 OR52N5Q8NH56 324 aa11.62□□□□□ -0.55
USF1-206ENST00000491629 CEP70Q8NHQ1 597 aa11.62□□□□□ -0.55
USF1-206ENST00000491629 FAM76AQ8TAV0 307 aa11.62□□□□□ -0.55
USF1-206ENST00000491629 CDS1Q92903 461 aa11.62□□□□□ -0.55
USF1-206ENST00000491629 MRGPRX4Q96LA9 322 aa11.62□□□□□ -0.55
USF1-206ENST00000491629 MS4A4EQ96PG1 132 aa11.62□□□□□ -0.55
USF1-206ENST00000491629 GIN1Q9NXP7 522 aa11.62□□□□□ -0.55
USF1-206ENST00000491629 KLHL9Q9P2J3 617 aa11.62□□□□□ -0.55
USF1-206ENST00000491629 GPC6Q9Y625 555 aaPredicted RBP11.62□□□□□ -0.55
USF1-206ENST00000491629 KCNE3Q9Y6H6 103 aa11.62□□□□□ -0.55
USF1-206ENST00000491629 ZNF724A8MTY0 619 aa11.61□□□□□ -0.55
USF1-206ENST00000491629 NPIPB9F8W1W9 429 aa11.61□□□□□ -0.55
USF1-206ENST00000491629 AKAP10O43572 662 aa11.61□□□□□ -0.55
USF1-206ENST00000491629 GPC1P35052 558 aa11.61□□□□□ -0.55
USF1-206ENST00000491629 FABP6P51161 128 aa11.61□□□□□ -0.55
USF1-206ENST00000491629 P2RX1P51575 399 aa11.61□□□□□ -0.55
USF1-206ENST00000491629 EFNA4P52798 201 aa11.61□□□□□ -0.55
USF1-206ENST00000491629 POU6F2P78424 691 aaPredicted RBP11.61□□□□□ -0.55
USF1-206ENST00000491629 SLC25A3Q00325 362 aa11.61□□□□□ -0.55
USF1-206ENST00000491629 CHRNEQ04844 493 aa11.61□□□□□ -0.55
USF1-206ENST00000491629 PDE7AQ13946 482 aa11.61□□□□□ -0.55
USF1-206ENST00000491629 MST1LQ2TV78 715 aa11.61□□□□□ -0.55
USF1-206ENST00000491629 FAM166AQ6J272 317 aa11.61□□□□□ -0.55
USF1-206ENST00000491629 LRIG3Q6UXM1 1119 aa11.61□□□□□ -0.55
USF1-206ENST00000491629 TIFABQ6ZNK6 161 aa11.61□□□□□ -0.55
USF1-206ENST00000491629 FBXL14Q8N1E6 418 aa11.61□□□□□ -0.55
USF1-206ENST00000491629 COX18Q8N8Q8 333 aa11.61□□□□□ -0.55
USF1-206ENST00000491629 FAM120BQ96EK7 910 aaKnown RBP11.61□□□□□ -0.55
USF1-206ENST00000491629 ZNF764Q96H86 408 aaPredicted RBP11.61□□□□□ -0.55
USF1-206ENST00000491629 RADILQ96JH8 1075 aa11.61□□□□□ -0.55
USF1-206ENST00000491629 FCRL1Q96LA6 429 aa11.61□□□□□ -0.55
USF1-206ENST00000491629 BTBD2Q9BX70 525 aa11.61□□□□□ -0.55
USF1-206ENST00000491629 C1QTNF6Q9BXI9 259 aa11.61□□□□□ -0.55
USF1-206ENST00000491629 EML4Q9HC35 981 aaKnown RBP11.61□□□□□ -0.55
USF1-206ENST00000491629 HHATLQ9HCP6 504 aa11.61□□□□□ -0.55
USF1-206ENST00000491629 EMCNQ9ULC0 261 aa11.61□□□□□ -0.55
USF1-206ENST00000491629 MGAT4BQ9UQ53 548 aa11.61□□□□□ -0.55
USF1-206ENST00000491629 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.61□□□□□ -0.55
USF1-206ENST00000491629 IGHV4-61A0A0C4DH41 118 aa11.6□□□□□ -0.55
USF1-206ENST00000491629 LOC100289279A0A1B0GTE1 492 aa11.6□□□□□ -0.55
USF1-206ENST00000491629 GJE1A6NN92 205 aa11.6□□□□□ -0.55
USF1-206ENST00000491629 ZNF716A6NP11 495 aa11.6□□□□□ -0.55
USF1-206ENST00000491629 G3V2L1 256 aa11.6□□□□□ -0.55
USF1-206ENST00000491629 KIF2AO00139 706 aaPredicted RBP11.6□□□□□ -0.55
USF1-206ENST00000491629 TBX19O60806 448 aa11.6□□□□□ -0.55
USF1-206ENST00000491629 RSL1D1O76021 490 aaKnown RBP11.6□□□□□ -0.55
USF1-206ENST00000491629 NUDT14O95848 222 aa11.6□□□□□ -0.55
USF1-206ENST00000491629 HMGN2P05204 90 aaKnown RBP11.6□□□□□ -0.55
USF1-206ENST00000491629 SNRPAP09012 282 aaKnown RBP11.6□□□□□ -0.55
USF1-206ENST00000491629 ALOX5P09917 674 aa11.6□□□□□ -0.55
USF1-206ENST00000491629 HPGDP15428 266 aa11.6□□□□□ -0.55
USF1-206ENST00000491629 SDC1P18827 310 aa11.6□□□□□ -0.55
USF1-206ENST00000491629 PTAFRP25105 342 aa11.6□□□□□ -0.55
USF1-206ENST00000491629 ECHS1P30084 290 aa11.6□□□□□ -0.55
USF1-206ENST00000491629 SERPINB4P48594 390 aa11.6□□□□□ -0.55
USF1-206ENST00000491629 GZMKP49863 264 aa11.6□□□□□ -0.55
USF1-206ENST00000491629 RUNX1T1Q06455 604 aa11.6□□□□□ -0.55
USF1-206ENST00000491629 SELENBP1Q13228 472 aa11.6□□□□□ -0.55
USF1-206ENST00000491629 GABRA6Q16445 453 aa11.6□□□□□ -0.55
USF1-206ENST00000491629 IMPG1Q17R60 797 aa11.6□□□□□ -0.55
USF1-206ENST00000491629 ABLIM2Q6H8Q1 611 aa11.6□□□□□ -0.55
USF1-206ENST00000491629 TMEM108Q6UXF1 575 aa11.6□□□□□ -0.55
USF1-206ENST00000491629 SZRD1Q7Z422 152 aa11.6□□□□□ -0.55
USF1-206ENST00000491629 WDR31Q8NA23 367 aa11.6□□□□□ -0.55
USF1-206ENST00000491629 OR2T11Q8NH01 316 aa11.6□□□□□ -0.55
USF1-206ENST00000491629 CLHC1Q8NHS4 586 aa11.6□□□□□ -0.55
USF1-206ENST00000491629 QRSL1Q9H0R6 528 aaKnown RBP11.6□□□□□ -0.55
USF1-206ENST00000491629 DUSP22Q9NRW4 184 aa11.6□□□□□ -0.55
USF1-206ENST00000491629 BAIAP2L1Q9UHR4 511 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms