RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 MATN1P21941 496 aa7.91□□□□□ -1.14
HDAC3-211ENST00000491581 IL12AP29459 219 aa7.91□□□□□ -1.14
HDAC3-211ENST00000491581 RYKP34925 604 aa7.91□□□□□ -1.14
HDAC3-211ENST00000491581 CDKN1AP38936 164 aa7.91□□□□□ -1.14
HDAC3-211ENST00000491581 PTH2RP49190 550 aa7.91□□□□□ -1.14
HDAC3-211ENST00000491581 P2RX1P51575 399 aa7.91□□□□□ -1.14
HDAC3-211ENST00000491581 ATP12AP54707 1039 aa7.91□□□□□ -1.14
HDAC3-211ENST00000491581 EEFSECP57772 596 aaKnown RBP7.91□□□□□ -1.14
HDAC3-211ENST00000491581 ABCE1P61221 599 aaKnown RBP7.91□□□□□ -1.14
HDAC3-211ENST00000491581 UFM1P61960 85 aa7.91□□□□□ -1.14
HDAC3-211ENST00000491581 PSPHP78330 225 aa7.91□□□□□ -1.14
HDAC3-211ENST00000491581 SPOCK1Q08629 439 aa7.91□□□□□ -1.14
HDAC3-211ENST00000491581 SKP2Q13309 424 aa7.91□□□□□ -1.14
HDAC3-211ENST00000491581 CAPRIN1Q14444 709 aaKnown RBP7.91□□□□□ -1.14
HDAC3-211ENST00000491581 TAB1Q15750 504 aa7.91□□□□□ -1.14
HDAC3-211ENST00000491581 TIGD2Q4W5G0 525 aa7.91□□□□□ -1.14
HDAC3-211ENST00000491581 SPANXN4Q5MJ08 99 aa7.91□□□□□ -1.14
HDAC3-211ENST00000491581 TFAP2EQ6VUC0 442 aa7.91□□□□□ -1.14
HDAC3-211ENST00000491581 ESPNLQ6ZVH7 1005 aa7.91□□□□□ -1.14
HDAC3-211ENST00000491581 R3HCC1LQ7Z5L2 792 aaKnown RBP7.91□□□□□ -1.14
HDAC3-211ENST00000491581 PRIMA1Q86XR5 153 aa7.91□□□□□ -1.14
HDAC3-211ENST00000491581 GABRG1Q8N1C3 465 aa7.91□□□□□ -1.14
HDAC3-211ENST00000491581 KBTBD8Q8NFY9 601 aa7.91□□□□□ -1.14
HDAC3-211ENST00000491581 OR4A15Q8NGL6 344 aa7.91□□□□□ -1.14
HDAC3-211ENST00000491581 PSMA8Q8TAA3 256 aa7.91□□□□□ -1.14
HDAC3-211ENST00000491581 ACTRT2Q8TDY3 377 aa7.91□□□□□ -1.14
HDAC3-211ENST00000491581 ZNF75CPQ92670 426 aaPredicted RBP7.91□□□□□ -1.14
HDAC3-211ENST00000491581 METTL2AQ96IZ6 378 aaKnown RBP7.91□□□□□ -1.14
HDAC3-211ENST00000491581 SLC35G5Q96KT7 338 aa7.91□□□□□ -1.14
HDAC3-211ENST00000491581 OR5B2Q96R09 309 aa7.91□□□□□ -1.14
HDAC3-211ENST00000491581 STACQ99469 402 aa7.91□□□□□ -1.14
HDAC3-211ENST00000491581 SLC39A3Q9BRY0 314 aa7.91□□□□□ -1.14
HDAC3-211ENST00000491581 PARD6BQ9BYG5 372 aa7.91□□□□□ -1.14
HDAC3-211ENST00000491581 WDR55Q9H6Y2 383 aaPredicted RBP7.91□□□□□ -1.14
HDAC3-211ENST00000491581 EML4Q9HC35 981 aaKnown RBP7.91□□□□□ -1.14
HDAC3-211ENST00000491581 DUSP22Q9NRW4 184 aa7.91□□□□□ -1.14
HDAC3-211ENST00000491581 BEX4Q9NWD9 120 aaPredicted RBP7.91□□□□□ -1.14
HDAC3-211ENST00000491581 ZNF226Q9NYT6 803 aa7.91□□□□□ -1.14
HDAC3-211ENST00000491581 KLHL13Q9P2N7 655 aa7.91□□□□□ -1.14
HDAC3-211ENST00000491581 MID2Q9UJV3 735 aa7.91□□□□□ -1.14
HDAC3-211ENST00000491581 MCTS1Q9ULC4 181 aaKnown RBP7.91□□□□□ -1.14
HDAC3-211ENST00000491581 FAF1Q9UNN5 650 aaPredicted RBP7.91□□□□□ -1.14
HDAC3-211ENST00000491581 EMC9Q9Y3B6 208 aa7.91□□□□□ -1.14
HDAC3-211ENST00000491581 DTNAQ9Y4J8 743 aa7.91□□□□□ -1.14
HDAC3-211ENST00000491581 A0A087WZY1 265 aa7.9□□□□□ -1.14
HDAC3-211ENST00000491581 SERINC4A6NH21 518 aa7.9□□□□□ -1.14
HDAC3-211ENST00000491581 CLOCKO15516 846 aa7.9□□□□□ -1.14
HDAC3-211ENST00000491581 ZNF264O43296 627 aa7.9□□□□□ -1.14
HDAC3-211ENST00000491581 SOD3P08294 240 aa7.9□□□□□ -1.14
HDAC3-211ENST00000491581 UBL4AP11441 157 aa7.9□□□□□ -1.14
HDAC3-211ENST00000491581 SLC1A6P48664 564 aa7.9□□□□□ -1.14
HDAC3-211ENST00000491581 CLDN8P56748 225 aa7.9□□□□□ -1.14
HDAC3-211ENST00000491581 SESN3P58005 492 aa7.9□□□□□ -1.14
HDAC3-211ENST00000491581 NAA20P61599 178 aa7.9□□□□□ -1.14
HDAC3-211ENST00000491581 EMX2Q04743 252 aa7.9□□□□□ -1.14
HDAC3-211ENST00000491581 KRTAP1-1Q07627 177 aa7.9□□□□□ -1.14
HDAC3-211ENST00000491581 SYPL1Q16563 259 aa7.9□□□□□ -1.14
HDAC3-211ENST00000491581 COX20Q5RI15 118 aa7.9□□□□□ -1.14
HDAC3-211ENST00000491581 C9orf135Q5VTT2 229 aa7.9□□□□□ -1.14
HDAC3-211ENST00000491581 TYW3Q6IPR3 259 aaKnown RBP7.9□□□□□ -1.14
HDAC3-211ENST00000491581 ADAM5Q6NVV9 412 aa7.9□□□□□ -1.14
HDAC3-211ENST00000491581 ZCCHC12Q6PEW1 402 aa7.9□□□□□ -1.14
HDAC3-211ENST00000491581 DNAJC14Q6Y2X3 702 aaPredicted RBP7.9□□□□□ -1.14
HDAC3-211ENST00000491581 FCRLAQ7L513 359 aa7.9□□□□□ -1.14
HDAC3-211ENST00000491581 CCDC103Q8IW40 242 aa7.9□□□□□ -1.14
HDAC3-211ENST00000491581 RIBC1Q8N443 379 aaPredicted RBP7.9□□□□□ -1.14
HDAC3-211ENST00000491581 ANKFN1Q8N957 763 aa7.9□□□□□ -1.14
HDAC3-211ENST00000491581 ANKRD42Q8N9B4 389 aa7.9□□□□□ -1.14
HDAC3-211ENST00000491581 OR56A1Q8NGH5 318 aa7.9□□□□□ -1.14
HDAC3-211ENST00000491581 MGARPQ8TDB4 240 aa7.9□□□□□ -1.14
HDAC3-211ENST00000491581 ZFP90Q8TF47 636 aa7.9□□□□□ -1.14
HDAC3-211ENST00000491581 XAGE5Q8WWM1 108 aa7.9□□□□□ -1.14
HDAC3-211ENST00000491581 CNOT9Q92600 299 aaKnown RBP7.9□□□□□ -1.14
HDAC3-211ENST00000491581 AKAP1Q92667 903 aaKnown RBP eCLIP7.9□□□□□ -1.14
HDAC3-211ENST00000491581 CAVIN3Q969G5 261 aa7.9□□□□□ -1.14
HDAC3-211ENST00000491581 ARL5BQ96KC2 179 aa7.9□□□□□ -1.14
HDAC3-211ENST00000491581 COX4I2Q96KJ9 171 aa7.9□□□□□ -1.14
HDAC3-211ENST00000491581 ZIM3Q96PE6 472 aa7.9□□□□□ -1.14
HDAC3-211ENST00000491581 PAIP2Q9BPZ3 127 aaKnown RBP7.9□□□□□ -1.14
HDAC3-211ENST00000491581 PSD2Q9BQI7 771 aa7.9□□□□□ -1.14
HDAC3-211ENST00000491581 BHLHE41Q9C0J9 482 aaPredicted RBP7.9□□□□□ -1.14
HDAC3-211ENST00000491581 PPCSQ9HAB8 311 aa7.9□□□□□ -1.14
HDAC3-211ENST00000491581 CTPS2Q9NRF8 586 aa7.9□□□□□ -1.14
HDAC3-211ENST00000491581 NPAP1Q9NZP6 1156 aa7.9□□□□□ -1.14
HDAC3-211ENST00000491581 MARCOQ9UEW3 520 aaPredicted RBP7.9□□□□□ -1.14
HDAC3-211ENST00000491581 GDF2Q9UK05 429 aaPredicted RBP7.9□□□□□ -1.14
HDAC3-211ENST00000491581 ADAM21Q9UKJ8 722 aa7.9□□□□□ -1.14
HDAC3-211ENST00000491581 LAMP3Q9UQV4 416 aa7.9□□□□□ -1.14
HDAC3-211ENST00000491581 ANK3Q12955 4377 aaKnown RBP7.9□□□□□ -1.15
HDAC3-211ENST00000491581 ZC3H12DA2A288 527 aaKnown RBP7.89□□□□□ -1.15
HDAC3-211ENST00000491581 DPRXA6NFQ7 191 aa7.89□□□□□ -1.15
HDAC3-211ENST00000491581 TTC36A6NLP5 189 aa7.89□□□□□ -1.15
HDAC3-211ENST00000491581 INAFM1C9JVW0 142 aa7.89□□□□□ -1.15
HDAC3-211ENST00000491581 LINC01387J3KSC0 135 aa7.89□□□□□ -1.15
HDAC3-211ENST00000491581 SDHDO14521 159 aa7.89□□□□□ -1.15
HDAC3-211ENST00000491581 CNOT4O95628 575 aaKnown RBP7.89□□□□□ -1.15
HDAC3-211ENST00000491581 FESP07332 822 aa7.89□□□□□ -1.15
HDAC3-211ENST00000491581 DHRS4L1P0CG22 281 aa7.89□□□□□ -1.15
HDAC3-211ENST00000491581 KITP10721 976 aa7.89□□□□□ -1.15
HDAC3-211ENST00000491581 FCGR2AP12318 317 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms