RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 SEMA6AQ9H2E6 1030 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 SLC38A1Q9H2H9 487 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 C7orf69Q9H7B7 122 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 YY1AP1Q9H869 796 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 ADPRHL2Q9NX46 363 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 CALML5Q9NZT1 146 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 LRFN1Q9P244 771 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 DTX4Q9Y2E6 619 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 PCDHGB6Q9Y5F9 930 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 ITPR2Q14571 2701 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 CACNA1DQ01668 2161 aa6.93□□□□□ -1.3
CLDN1-202ENST00000490800 PRAMEF25A6NGN4 478 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 TTC36A6NLP5 189 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 NPIPA5E9PKD4 350 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 CLOCKO15516 846 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 ZNHIT1O43257 154 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 SERPINB7O75635 380 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 NEURL1O76050 574 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 SOX30O94993 753 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 PRSS23O95084 383 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 TP53P04637 393 aaPredicted RBP6.92□□□□□ -1.3
CLDN1-202ENST00000490800 SP1P08047 785 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 PRF1P14222 555 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 ETS2P15036 469 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 TNFRSF1BP20333 461 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 TRHRP34981 398 aaPredicted RBP6.92□□□□□ -1.3
CLDN1-202ENST00000490800 CA7P43166 264 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 KCNJ5P48544 419 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 SLC37A1P57057 533 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 POU6F2P78424 691 aaPredicted RBP6.92□□□□□ -1.3
CLDN1-202ENST00000490800 VLDLRP98155 873 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 PSG6Q00889 435 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 ALDH6A1Q02252 535 aaKnown RBP6.92□□□□□ -1.3
CLDN1-202ENST00000490800 RBPJQ06330 500 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 C3AR1Q16581 482 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 DUSP7Q16829 419 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 CYP27C1Q4G0S4 372 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 IFI44LQ53G44 452 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 KRTCAP3Q53RY4 240 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 DCST2Q5T1A1 773 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 CCNJQ5T5M9 372 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 TYW3Q6IPR3 259 aaKnown RBP6.92□□□□□ -1.3
CLDN1-202ENST00000490800 SEZ6L2Q6UXD5 910 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 FRRS1Q6ZNA5 592 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 FKBP9P1Q75LS8 142 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 PIWIL3Q7Z3Z3 882 aaKnown RBP6.92□□□□□ -1.3
CLDN1-202ENST00000490800 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.92□□□□□ -1.3
CLDN1-202ENST00000490800 HMGN2P46Q86SG4 172 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 COMTD1Q86VU5 262 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 ARMC8Q8IUR7 673 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 ZDHHC21Q8IVQ6 265 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 SLC34A3Q8N130 599 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 COX18Q8N8Q8 333 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 NFAM1Q8NET5 270 aaPredicted RBP6.92□□□□□ -1.3
CLDN1-202ENST00000490800 GPR151Q8TDV0 419 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 ITLN2Q8WWU7 325 aaPredicted RBP6.92□□□□□ -1.3
CLDN1-202ENST00000490800 LZICQ8WZA0 190 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 DAZLQ92904 295 aaKnown RBP6.92□□□□□ -1.3
CLDN1-202ENST00000490800 ZG16BQ96DA0 208 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 SCMH1Q96GD3 660 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 CCDC120Q96HB5 630 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 ZNF607Q96SK3 696 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 SDF2Q99470 211 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 TACO1Q9BSH4 297 aaKnown RBP6.92□□□□□ -1.3
CLDN1-202ENST00000490800 ITPAQ9BY32 194 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 OR8D2Q9GZM6 311 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 ZNF350Q9GZX5 532 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 NTN4Q9HB63 628 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 IL1RAPQ9NPH3 570 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 FBXO34Q9NWN3 711 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 PRODH2Q9UF12 536 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 NPIPA1Q9UND3 350 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 ABCG2Q9UNQ0 655 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 PCDHGB3Q9Y5G1 929 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 CLCA3PQ9Y6N3 262 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 DSPPQ9NZW4 1301 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 ZGRF1Q86YA3 2104 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 SVILO95425 2214 aa6.92□□□□□ -1.3
CLDN1-202ENST00000490800 SAC3D1A6NKF1 404 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 hCG_2039718K7EN88 272 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 DYRK3O43781 588 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 PEX1O43933 1283 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 FCMRO60667 390 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 SLC19A2O60779 497 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 STX11O75558 287 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 DIRAS1O95057 198 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 KCNK2O95069 426 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 EPPINO95925 133 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 AK1P00568 194 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 IGKV1D-16P01601 117 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 FABP3P05413 133 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 FESP07332 822 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 GUSBP08236 651 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 CT45A8P0DMV1 189 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 CT45A9P0DMV2 189 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 RPS4Y1P22090 263 aaKnown RBP6.91□□□□□ -1.3
CLDN1-202ENST00000490800 OR1E2P47887 323 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 CYB561P49447 251 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 GPR143P51810 404 aa6.91□□□□□ -1.3
CLDN1-202ENST00000490800 MLF1P58340 268 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms