RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 PDSS1Q5T2R2 415 aa6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 FBXW9Q5XUX1 488 aa6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 GRHL2Q6ISB3 625 aa6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 FAM45BPQ6NSW5 357 aa6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 FAM180BQ6P0A1 224 aa6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 DRICH1Q6PGQ1 229 aaPredicted RBP6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 REC114Q7Z4M0 266 aa6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 SPATA19Q7Z5L4 167 aa6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 TRABD2AQ86V40 505 aa6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 SLC44A2Q8IWA5 706 aaPredicted RBP6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 LILRA2Q8N149 483 aa6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 SLC43A2Q8N370 569 aa6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 OR4M2Q8NGB6 313 aa6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 FAM45AQ8TCE6 357 aa6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 ZNF675Q8TD23 568 aa6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 SLC9A6Q92581 669 aa6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 TMIGD2Q96BF3 282 aa6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 CNRIP1Q96F85 164 aaPredicted RBP6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 HES6Q96HZ4 224 aa6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 REXO5Q96IC2 774 aaKnown RBP6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 HRASLS5Q96KN8 279 aa6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 ZNF300Q96RE9 604 aaPredicted RBP6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 DOK1Q99704 481 aa6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 CNOT10Q9H9A5 744 aaKnown RBP6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 PLAC1Q9HBJ0 212 aa6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 XAB2Q9HCS7 855 aaKnown RBP6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 SLC52A3Q9NQ40 469 aa6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 MED17Q9NVC6 651 aa6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 KLHL9Q9P2J3 617 aa6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 CTNNAL1Q9UBT7 734 aa6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 MALT1Q9UDY8 824 aa6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 MCM8Q9UJA3 840 aa6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 FBXO9Q9UK97 447 aaPredicted RBP6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 PCDHA9Q9Y5H5 950 aa6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 HUWE1Q7Z6Z7 4374 aaKnown RBP6.13□□□□□ -1.43
PDLIM1-203ENST00000490391 TMEM129A0AVI4 362 aa6.12□□□□□ -1.43
PDLIM1-203ENST00000490391 CIB4A0PJX0 185 aa6.12□□□□□ -1.43
PDLIM1-203ENST00000490391 GOLGA6L10A6NI86 522 aa6.12□□□□□ -1.43
PDLIM1-203ENST00000490391 ZNF724A8MTY0 619 aa6.12□□□□□ -1.43
PDLIM1-203ENST00000490391 J3QLI3 93 aa6.12□□□□□ -1.43
PDLIM1-203ENST00000490391 KLF11O14901 512 aa6.12□□□□□ -1.43
PDLIM1-203ENST00000490391 NDUFB5O43674 189 aa6.12□□□□□ -1.43
PDLIM1-203ENST00000490391 EIF4EBP3O60516 100 aaPredicted RBP6.12□□□□□ -1.43
PDLIM1-203ENST00000490391 WISP3O95389 354 aaPredicted RBP6.12□□□□□ -1.43
PDLIM1-203ENST00000490391 TTC4O95801 387 aa6.12□□□□□ -1.43
PDLIM1-203ENST00000490391 KNG1P01042 644 aa6.12□□□□□ -1.43
PDLIM1-203ENST00000490391 IGHV3-9P01782 118 aa6.12□□□□□ -1.43
PDLIM1-203ENST00000490391 LINGO3P0C6S8 592 aa6.12□□□□□ -1.43
PDLIM1-203ENST00000490391 CSNK2A2P19784 350 aaPredicted RBP6.12□□□□□ -1.43
PDLIM1-203ENST00000490391 ME2P23368 584 aa6.12□□□□□ -1.43
PDLIM1-203ENST00000490391 FPR2P25090 351 aa6.12□□□□□ -1.43
PDLIM1-203ENST00000490391 NTF4P34130 210 aa6.12□□□□□ -1.43
PDLIM1-203ENST00000490391 KCNJ1P48048 391 aa6.12□□□□□ -1.43
PDLIM1-203ENST00000490391 RAB10P61026 200 aa6.12□□□□□ -1.43
PDLIM1-203ENST00000490391 PRR5P85299 388 aa6.12□□□□□ -1.43
PDLIM1-203ENST00000490391 COL10A1Q03692 680 aa6.12□□□□□ -1.43
PDLIM1-203ENST00000490391 SLC9A3R2Q15599 337 aa6.12□□□□□ -1.43
PDLIM1-203ENST00000490391 CCNG2Q16589 344 aa6.12□□□□□ -1.43
PDLIM1-203ENST00000490391 ELFN2Q5R3F8 820 aa6.12□□□□□ -1.43
PDLIM1-203ENST00000490391 RBMS3Q6XE24 437 aaKnown RBP6.12□□□□□ -1.43
PDLIM1-203ENST00000490391 LRRC70Q7Z2Q7 622 aa6.12□□□□□ -1.43
PDLIM1-203ENST00000490391 PEX26Q7Z412 305 aa6.12□□□□□ -1.43
PDLIM1-203ENST00000490391 RELL1Q8IUW5 271 aa6.12□□□□□ -1.43
PDLIM1-203ENST00000490391 KIR3DL3Q8N743 410 aa6.12□□□□□ -1.43
PDLIM1-203ENST00000490391 PDPRQ8NCN5 879 aa6.12□□□□□ -1.43
PDLIM1-203ENST00000490391 MRAPQ8TCY5 172 aa6.12□□□□□ -1.43
PDLIM1-203ENST00000490391 ERP27Q96DN0 273 aa6.12□□□□□ -1.43
PDLIM1-203ENST00000490391 MRGPRX4Q96LA9 322 aa6.12□□□□□ -1.43
PDLIM1-203ENST00000490391 TIGARQ9NQ88 270 aa6.12□□□□□ -1.43
PDLIM1-203ENST00000490391 SLC17A5Q9NRA2 495 aa6.12□□□□□ -1.43
PDLIM1-203ENST00000490391 TAS2R16Q9NYV7 291 aa6.12□□□□□ -1.43
PDLIM1-203ENST00000490391 OR10H1Q9Y4A9 318 aa6.12□□□□□ -1.43
PDLIM1-203ENST00000490391 HECTD4Q9Y4D8 3996 aa6.11□□□□□ -1.43
PDLIM1-203ENST00000490391 A0A1B0GUS0 222 aa6.11□□□□□ -1.43
PDLIM1-203ENST00000490391 C1orf226A1L170 272 aa6.11□□□□□ -1.43
PDLIM1-203ENST00000490391 PHGDHO43175 533 aaKnown RBP6.11□□□□□ -1.43
PDLIM1-203ENST00000490391 PLPP2O43688 288 aa6.11□□□□□ -1.43
PDLIM1-203ENST00000490391 CCNT2O60583 730 aaKnown RBP6.11□□□□□ -1.43
PDLIM1-203ENST00000490391 CYTIPO60759 359 aa6.11□□□□□ -1.43
PDLIM1-203ENST00000490391 KERAO60938 352 aa6.11□□□□□ -1.43
PDLIM1-203ENST00000490391 BCAS2O75934 225 aaPredicted RBP6.11□□□□□ -1.43
PDLIM1-203ENST00000490391 SEMA3DO95025 777 aa6.11□□□□□ -1.43
PDLIM1-203ENST00000490391 ELK4P28324 431 aa6.11□□□□□ -1.43
PDLIM1-203ENST00000490391 GPR6P46095 362 aaPredicted RBP6.11□□□□□ -1.43
PDLIM1-203ENST00000490391 LOXL3P58215 753 aa6.11□□□□□ -1.43
PDLIM1-203ENST00000490391 TAS2R39P59534 338 aa6.11□□□□□ -1.43
PDLIM1-203ENST00000490391 MYBPC1Q00872 1141 aa6.11□□□□□ -1.43
PDLIM1-203ENST00000490391 IL1RL1Q01638 556 aa6.11□□□□□ -1.43
PDLIM1-203ENST00000490391 BAMBIQ13145 260 aa6.11□□□□□ -1.43
PDLIM1-203ENST00000490391 OR4D1Q15615 310 aa6.11□□□□□ -1.43
PDLIM1-203ENST00000490391 TEDDM1Q5T9Z0 273 aa6.11□□□□□ -1.43
PDLIM1-203ENST00000490391 SAXO2Q658L1 398 aa6.11□□□□□ -1.43
PDLIM1-203ENST00000490391 OR7E24Q6IFN5 339 aa6.11□□□□□ -1.43
PDLIM1-203ENST00000490391 SULT1C3Q6IMI6 304 aa6.11□□□□□ -1.43
PDLIM1-203ENST00000490391 C17orf107Q6ZR85 190 aa6.11□□□□□ -1.43
PDLIM1-203ENST00000490391 GALNT5Q7Z7M9 940 aa6.11□□□□□ -1.43
PDLIM1-203ENST00000490391 ZNF100Q8IYN0 542 aa6.11□□□□□ -1.43
PDLIM1-203ENST00000490391 BCL6BQ8N143 479 aaPredicted RBP6.11□□□□□ -1.43
PDLIM1-203ENST00000490391 WDR20Q8TBZ3 569 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms