RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 H3BNH8 94 aa10.99□□□□□ -0.65
CPSF3-204ENST00000489403 GTPBP1O00178 669 aaKnown RBP10.99□□□□□ -0.65
CPSF3-204ENST00000489403 PEX11AO75192 247 aa10.99□□□□□ -0.65
CPSF3-204ENST00000489403 C6orf47O95873 294 aa10.99□□□□□ -0.65
CPSF3-204ENST00000489403 THBS1P07996 1170 aa10.99□□□□□ -0.65
CPSF3-204ENST00000489403 FGF4P08620 206 aa10.99□□□□□ -0.65
CPSF3-204ENST00000489403 EDNRAP25101 427 aa10.99□□□□□ -0.65
CPSF3-204ENST00000489403 ALDH3A1P30838 453 aa10.99□□□□□ -0.65
CPSF3-204ENST00000489403 IDUAP35475 653 aa10.99□□□□□ -0.65
CPSF3-204ENST00000489403 ACVR1BP36896 505 aa10.99□□□□□ -0.65
CPSF3-204ENST00000489403 RPL3P39023 403 aaKnown RBP10.99□□□□□ -0.65
CPSF3-204ENST00000489403 CCT3P49368 545 aaKnown RBP10.99□□□□□ -0.65
CPSF3-204ENST00000489403 ATP12AP54707 1039 aa10.99□□□□□ -0.65
CPSF3-204ENST00000489403 RAC3P60763 192 aa10.99□□□□□ -0.65
CPSF3-204ENST00000489403 BSPH1Q075Z2 132 aa10.99□□□□□ -0.65
CPSF3-204ENST00000489403 PTGR1Q14914 329 aa10.99□□□□□ -0.65
CPSF3-204ENST00000489403 P2RY6Q15077 328 aa10.99□□□□□ -0.65
CPSF3-204ENST00000489403 PGGHGQ32M88 737 aa10.99□□□□□ -0.65
CPSF3-204ENST00000489403 XKR7Q5GH72 579 aa10.99□□□□□ -0.65
CPSF3-204ENST00000489403 SLC25A53Q5H9E4 307 aa10.99□□□□□ -0.65
CPSF3-204ENST00000489403 HEPHL1Q6MZM0 1159 aa10.99□□□□□ -0.65
CPSF3-204ENST00000489403 Q6ZT83 130 aa10.99□□□□□ -0.65
CPSF3-204ENST00000489403 BHLHA15Q7RTS1 189 aaPredicted RBP10.99□□□□□ -0.65
CPSF3-204ENST00000489403 SLC43A2Q8N370 569 aa10.99□□□□□ -0.65
CPSF3-204ENST00000489403 ZNF614Q8N883 585 aa10.99□□□□□ -0.65
CPSF3-204ENST00000489403 OR56A1Q8NGH5 318 aa10.99□□□□□ -0.65
CPSF3-204ENST00000489403 RFWD2Q8NHY2 731 aa10.99□□□□□ -0.65
CPSF3-204ENST00000489403 PIWIL2Q8TC59 973 aaKnown RBP10.99□□□□□ -0.65
CPSF3-204ENST00000489403 OR5P2Q8WZ92 322 aa10.99□□□□□ -0.65
CPSF3-204ENST00000489403 GTPBP3Q969Y2 492 aaKnown RBP10.99□□□□□ -0.65
CPSF3-204ENST00000489403 MRGPRX4Q96LA9 322 aa10.99□□□□□ -0.65
CPSF3-204ENST00000489403 PPP3R2Q96LZ3 170 aa10.99□□□□□ -0.65
CPSF3-204ENST00000489403 C1orf50Q9BV19 199 aa10.99□□□□□ -0.65
CPSF3-204ENST00000489403 MECRQ9BV79 373 aa10.99□□□□□ -0.65
CPSF3-204ENST00000489403 REG4Q9BYZ8 158 aa10.99□□□□□ -0.65
CPSF3-204ENST00000489403 TRIM2Q9C040 744 aa10.99□□□□□ -0.65
CPSF3-204ENST00000489403 SLCO5A1Q9H2Y9 848 aa10.99□□□□□ -0.65
CPSF3-204ENST00000489403 PPCSQ9HAB8 311 aa10.99□□□□□ -0.65
CPSF3-204ENST00000489403 NGBQ9NPG2 151 aa10.99□□□□□ -0.65
CPSF3-204ENST00000489403 MKS1Q9NXB0 559 aa10.99□□□□□ -0.65
CPSF3-204ENST00000489403 KLHL9Q9P2J3 617 aa10.99□□□□□ -0.65
CPSF3-204ENST00000489403 PRSS50Q9UI38 385 aa10.99□□□□□ -0.65
CPSF3-204ENST00000489403 FAF1Q9UNN5 650 aaPredicted RBP10.99□□□□□ -0.65
CPSF3-204ENST00000489403 DTNAQ9Y4J8 743 aa10.99□□□□□ -0.65
CPSF3-204ENST00000489403 TRAF6Q9Y4K3 522 aa10.99□□□□□ -0.65
CPSF3-204ENST00000489403 NUP214P35658 2090 aaPredicted RBP10.98□□□□□ -0.65
CPSF3-204ENST00000489403 ETV2O00321 342 aaPredicted RBP10.98□□□□□ -0.65
CPSF3-204ENST00000489403 SMAD9O15198 467 aaKnown RBP10.98□□□□□ -0.65
CPSF3-204ENST00000489403 ZNF264O43296 627 aa10.98□□□□□ -0.65
CPSF3-204ENST00000489403 NPHS1O60500 1241 aa10.98□□□□□ -0.65
CPSF3-204ENST00000489403 NDUFS7O75251 213 aa10.98□□□□□ -0.65
CPSF3-204ENST00000489403 LYZL6O75951 148 aa10.98□□□□□ -0.65
CPSF3-204ENST00000489403 IGHV4-39P01824 125 aa10.98□□□□□ -0.65
CPSF3-204ENST00000489403 KRT16P08779 473 aa10.98□□□□□ -0.65
CPSF3-204ENST00000489403 UBL4AP11441 157 aa10.98□□□□□ -0.65
CPSF3-204ENST00000489403 MAPK1P28482 360 aa10.98□□□□□ -0.65
CPSF3-204ENST00000489403 SLC7A1P30825 629 aa10.98□□□□□ -0.65
CPSF3-204ENST00000489403 OR3A2P47893 321 aa10.98□□□□□ -0.65
CPSF3-204ENST00000489403 FAPQ12884 760 aa10.98□□□□□ -0.65
CPSF3-204ENST00000489403 QPRTQ15274 297 aa10.98□□□□□ -0.65
CPSF3-204ENST00000489403 STK11Q15831 433 aa10.98□□□□□ -0.65
CPSF3-204ENST00000489403 SPDYE7PQ495Y7 208 aa10.98□□□□□ -0.65
CPSF3-204ENST00000489403 ARL13AQ5H913 290 aaPredicted RBP10.98□□□□□ -0.65
CPSF3-204ENST00000489403 C3orf33Q6P1S2 294 aa10.98□□□□□ -0.65
CPSF3-204ENST00000489403 DNAJC14Q6Y2X3 702 aaPredicted RBP10.98□□□□□ -0.65
CPSF3-204ENST00000489403 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.98□□□□□ -0.65
CPSF3-204ENST00000489403 HOMEZQ8IX15 550 aa10.98□□□□□ -0.65
CPSF3-204ENST00000489403 TMCO5AQ8N6Q1 288 aa10.98□□□□□ -0.65
CPSF3-204ENST00000489403 TOR1AIP2Q8NFQ8 470 aa10.98□□□□□ -0.65
CPSF3-204ENST00000489403 OR5D16Q8NGK9 328 aa10.98□□□□□ -0.65
CPSF3-204ENST00000489403 OR5W2Q8NH69 310 aa10.98□□□□□ -0.65
CPSF3-204ENST00000489403 OR5AK3PQ8NH89 298 aa10.98□□□□□ -0.65
CPSF3-204ENST00000489403 SPATA3Q8NHX4 192 aa10.98□□□□□ -0.65
CPSF3-204ENST00000489403 KIF18AQ8NI77 898 aa10.98□□□□□ -0.65
CPSF3-204ENST00000489403 AGR3Q8TD06 166 aa10.98□□□□□ -0.65
CPSF3-204ENST00000489403 SFXN5Q8TD22 340 aa10.98□□□□□ -0.65
CPSF3-204ENST00000489403 APOPT1Q96IL0 206 aa10.98□□□□□ -0.65
CPSF3-204ENST00000489403 C3orf30Q96M34 536 aa10.98□□□□□ -0.65
CPSF3-204ENST00000489403 OR7D2Q96RA2 312 aa10.98□□□□□ -0.65
CPSF3-204ENST00000489403 ZNF300Q96RE9 604 aaPredicted RBP10.98□□□□□ -0.65
CPSF3-204ENST00000489403 USB1Q9BQ65 265 aaKnown RBP10.98□□□□□ -0.65
CPSF3-204ENST00000489403 ATAD3AQ9NVI7 634 aa10.98□□□□□ -0.65
CPSF3-204ENST00000489403 CENPVL1A0A0U1RR11 272 aa10.97□□□□□ -0.65
CPSF3-204ENST00000489403 SHISA9B4DS77 424 aa10.97□□□□□ -0.65
CPSF3-204ENST00000489403 C9JVG2 144 aa10.97□□□□□ -0.65
CPSF3-204ENST00000489403 EIF4E2O60573 245 aaKnown RBP10.97□□□□□ -0.65
CPSF3-204ENST00000489403 CYTIPO60759 359 aa10.97□□□□□ -0.65
CPSF3-204ENST00000489403 RAMP1O60894 148 aa10.97□□□□□ -0.65
CPSF3-204ENST00000489403 ADAM11O75078 769 aa10.97□□□□□ -0.65
CPSF3-204ENST00000489403 H6PDO95479 791 aa10.97□□□□□ -0.65
CPSF3-204ENST00000489403 CD8AP01732 235 aa10.97□□□□□ -0.65
CPSF3-204ENST00000489403 COX5AP20674 150 aa10.97□□□□□ -0.65
CPSF3-204ENST00000489403 IGHV1-2P23083 117 aa10.97□□□□□ -0.65
CPSF3-204ENST00000489403 CCR4P51679 360 aa10.97□□□□□ -0.65
CPSF3-204ENST00000489403 RASGEF1BQ0VAM2 473 aa10.97□□□□□ -0.65
CPSF3-204ENST00000489403 CBFBQ13951 182 aa10.97□□□□□ -0.65
CPSF3-204ENST00000489403 LSM12Q3MHD2 195 aaKnown RBP10.97□□□□□ -0.65
CPSF3-204ENST00000489403 ATP6AP1LQ52LC2 224 aa10.97□□□□□ -0.65
CPSF3-204ENST00000489403 PDZK1Q5T2W1 519 aa10.97□□□□□ -0.65
CPSF3-204ENST00000489403 DNM1P46Q6ZS02 220 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms