RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 SEM1Q6ZVN7 128 aa13.58□□□□□ -0.24
CXCL12-207ENST00000488591 P4HA3Q7Z4N8 544 aa13.58□□□□□ -0.24
CXCL12-207ENST00000488591 RETREG3Q86VR2 466 aa13.58□□□□□ -0.24
CXCL12-207ENST00000488591 LILRA2Q8N149 483 aa13.58□□□□□ -0.24
CXCL12-207ENST00000488591 TNIP2Q8NFZ5 429 aa13.58□□□□□ -0.24
CXCL12-207ENST00000488591 MBD3L2Q8NHZ7 208 aaPredicted RBP13.58□□□□□ -0.24
CXCL12-207ENST00000488591 FBXO27Q8NI29 283 aa13.58□□□□□ -0.24
CXCL12-207ENST00000488591 ZNF563Q8TA94 476 aa13.58□□□□□ -0.24
CXCL12-207ENST00000488591 ST8SIA1Q92185 356 aa13.58□□□□□ -0.24
CXCL12-207ENST00000488591 MRGPRX4Q96LA9 322 aa13.58□□□□□ -0.24
CXCL12-207ENST00000488591 ANKRD27Q96NW4 1050 aa13.58□□□□□ -0.24
CXCL12-207ENST00000488591 CGREF1Q99674 301 aa13.58□□□□□ -0.24
CXCL12-207ENST00000488591 FAM107BQ9H098 131 aa13.58□□□□□ -0.24
CXCL12-207ENST00000488591 BCL2L10Q9HD36 194 aa13.58□□□□□ -0.24
CXCL12-207ENST00000488591 EXOSC3Q9NQT5 275 aaKnown RBP13.58□□□□□ -0.24
CXCL12-207ENST00000488591 PAQR5Q9NXK6 330 aaPredicted RBP13.58□□□□□ -0.24
CXCL12-207ENST00000488591 IFT52Q9Y366 437 aa13.58□□□□□ -0.24
CXCL12-207ENST00000488591 MED12Q93074 2177 aa13.58□□□□□ -0.24
CXCL12-207ENST00000488591 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.57□□□□□ -0.24
CXCL12-207ENST00000488591 LOC100653049A0A140TA62 436 aa13.57□□□□□ -0.24
CXCL12-207ENST00000488591 FAM90A27PA6NNH2 459 aa13.57□□□□□ -0.24
CXCL12-207ENST00000488591 EIF1AYO14602 144 aaKnown RBP13.57□□□□□ -0.24
CXCL12-207ENST00000488591 DVL2O14641 736 aa13.57□□□□□ -0.24
CXCL12-207ENST00000488591 DNAJA2O60884 412 aa13.57□□□□□ -0.24
CXCL12-207ENST00000488591 KRT34O76011 436 aa13.57□□□□□ -0.24
CXCL12-207ENST00000488591 TOXO94900 526 aa13.57□□□□□ -0.24
CXCL12-207ENST00000488591 NPPAP01160 153 aa13.57□□□□□ -0.24
CXCL12-207ENST00000488591 UQCRBP14927 111 aa13.57□□□□□ -0.24
CXCL12-207ENST00000488591 RPS4Y1P22090 263 aaKnown RBP13.57□□□□□ -0.24
CXCL12-207ENST00000488591 SLC6A2P23975 617 aa13.57□□□□□ -0.24
CXCL12-207ENST00000488591 PSMA4P25789 261 aaKnown RBP13.57□□□□□ -0.24
CXCL12-207ENST00000488591 SUCLG1P53597 346 aaKnown RBP13.57□□□□□ -0.24
CXCL12-207ENST00000488591 CLDN15P56746 228 aa13.57□□□□□ -0.24
CXCL12-207ENST00000488591 CLDN20P56880 219 aa13.57□□□□□ -0.24
CXCL12-207ENST00000488591 GNGT1P63211 74 aa13.57□□□□□ -0.24
CXCL12-207ENST00000488591 TOMM34Q15785 309 aaPredicted RBP13.57□□□□□ -0.24
CXCL12-207ENST00000488591 SLC25A35Q3KQZ1 300 aa13.57□□□□□ -0.24
CXCL12-207ENST00000488591 COQ5Q5HYK3 327 aa13.57□□□□□ -0.24
CXCL12-207ENST00000488591 SP5Q6BEB4 398 aaPredicted RBP13.57□□□□□ -0.24
CXCL12-207ENST00000488591 REEP3Q6NUK4 255 aa13.57□□□□□ -0.24
CXCL12-207ENST00000488591 ADGRE4PQ86SQ3 457 aa13.57□□□□□ -0.24
CXCL12-207ENST00000488591 KRT73Q86Y46 540 aa13.57□□□□□ -0.24
CXCL12-207ENST00000488591 ZNF440Q8IYI8 595 aa13.57□□□□□ -0.24
CXCL12-207ENST00000488591 PCYOX1LQ8NBM8 494 aa13.57□□□□□ -0.24
CXCL12-207ENST00000488591 FAM71CQ8NEG0 241 aa13.57□□□□□ -0.24
CXCL12-207ENST00000488591 BBS10Q8TAM1 723 aa13.57□□□□□ -0.24
CXCL12-207ENST00000488591 POC1BQ8TC44 478 aa13.57□□□□□ -0.24
CXCL12-207ENST00000488591 MAL2Q969L2 176 aa13.57□□□□□ -0.24
CXCL12-207ENST00000488591 ZFP3Q96NJ6 502 aa13.57□□□□□ -0.24
CXCL12-207ENST00000488591 SH3GL1Q99961 368 aa13.57□□□□□ -0.24
CXCL12-207ENST00000488591 KLHDC3Q9BQ90 382 aa13.57□□□□□ -0.24
CXCL12-207ENST00000488591 CPPED1Q9BRF8 314 aaPredicted RBP13.57□□□□□ -0.24
CXCL12-207ENST00000488591 PINK1Q9BXM7 581 aa13.57□□□□□ -0.24
CXCL12-207ENST00000488591 SERINC1Q9NRX5 453 aa13.57□□□□□ -0.24
CXCL12-207ENST00000488591 ZNF629Q9UEG4 869 aaPredicted RBP13.57□□□□□ -0.24
CXCL12-207ENST00000488591 DSPPQ9NZW4 1301 aa13.57□□□□□ -0.24
CXCL12-207ENST00000488591 SLC22A20A6NK97 555 aa13.56□□□□□ -0.24
CXCL12-207ENST00000488591 CLDN24A6NM45 220 aa13.56□□□□□ -0.24
CXCL12-207ENST00000488591 KDM4EB2RXH2 506 aaPredicted RBP13.56□□□□□ -0.24
CXCL12-207ENST00000488591 FBP2O00757 339 aa13.56□□□□□ -0.24
CXCL12-207ENST00000488591 RCBTB2O95199 551 aa13.56□□□□□ -0.24
CXCL12-207ENST00000488591 PGM3O95394 542 aa13.56□□□□□ -0.24
CXCL12-207ENST00000488591 THBS1P07996 1170 aa13.56□□□□□ -0.24
CXCL12-207ENST00000488591 ARAFP10398 606 aa13.56□□□□□ -0.24
CXCL12-207ENST00000488591 CTSSP25774 331 aa13.56□□□□□ -0.24
CXCL12-207ENST00000488591 RYKP34925 604 aa13.56□□□□□ -0.24
CXCL12-207ENST00000488591 OPRM1P35372 400 aa13.56□□□□□ -0.24
CXCL12-207ENST00000488591 EIF1AXP47813 144 aaKnown RBP13.56□□□□□ -0.24
CXCL12-207ENST00000488591 GYS2P54840 703 aa13.56□□□□□ -0.24
CXCL12-207ENST00000488591 EEF1A1P68104 462 aaKnown RBP13.56□□□□□ -0.24
CXCL12-207ENST00000488591 CDK6Q00534 326 aa13.56□□□□□ -0.24
CXCL12-207ENST00000488591 CDSNQ15517 529 aa13.56□□□□□ -0.24
CXCL12-207ENST00000488591 SLC25A53Q5H9E4 307 aa13.56□□□□□ -0.24
CXCL12-207ENST00000488591 RPS26P11Q5JNZ5 115 aaPredicted RBP13.56□□□□□ -0.24
CXCL12-207ENST00000488591 MRPL2Q5T653 305 aaKnown RBP13.56□□□□□ -0.24
CXCL12-207ENST00000488591 EEF1A1P5Q5VTE0 462 aa13.56□□□□□ -0.24
CXCL12-207ENST00000488591 OR2A2Q6IF42 318 aa13.56□□□□□ -0.24
CXCL12-207ENST00000488591 ESPNLQ6ZVH7 1005 aa13.56□□□□□ -0.24
CXCL12-207ENST00000488591 SNX32Q86XE0 403 aa13.56□□□□□ -0.24
CXCL12-207ENST00000488591 C9orf106Q8NAJ2 232 aa13.56□□□□□ -0.24
CXCL12-207ENST00000488591 NFKBIDQ8NI38 313 aa13.56□□□□□ -0.24
CXCL12-207ENST00000488591 CNOT9Q92600 299 aaKnown RBP13.56□□□□□ -0.24
CXCL12-207ENST00000488591 NPAS1Q99742 590 aa13.56□□□□□ -0.24
CXCL12-207ENST00000488591 SPATA5L1Q9BVQ7 753 aa13.56□□□□□ -0.24
CXCL12-207ENST00000488591 PRRG4Q9BZD6 226 aa13.56□□□□□ -0.24
CXCL12-207ENST00000488591 IKZF5Q9H5V7 419 aa13.56□□□□□ -0.24
CXCL12-207ENST00000488591 TMEM38AQ9H6F2 299 aa13.56□□□□□ -0.24
CXCL12-207ENST00000488591 TMEM185BQ9H7F4 350 aa13.56□□□□□ -0.24
CXCL12-207ENST00000488591 TIGARQ9NQ88 270 aa13.56□□□□□ -0.24
CXCL12-207ENST00000488591 ACER3Q9NUN7 267 aa13.56□□□□□ -0.24
CXCL12-207ENST00000488591 GID8Q9NWU2 228 aa13.56□□□□□ -0.24
CXCL12-207ENST00000488591 CLCF1Q9UBD9 225 aa13.56□□□□□ -0.24
CXCL12-207ENST00000488591 PRDM4Q9UKN5 801 aa13.56□□□□□ -0.24
CXCL12-207ENST00000488591 CFAP73A6NFT4 308 aa13.55□□□□□ -0.24
CXCL12-207ENST00000488591 H0YC42 278 aa13.55□□□□□ -0.24
CXCL12-207ENST00000488591 ETV2O00321 342 aaPredicted RBP13.55□□□□□ -0.24
CXCL12-207ENST00000488591 MRASO14807 208 aa13.55□□□□□ -0.24
CXCL12-207ENST00000488591 ADAMDEC1O15204 470 aa13.55□□□□□ -0.24
CXCL12-207ENST00000488591 SYNGR4O95473 234 aa13.55□□□□□ -0.24
CXCL12-207ENST00000488591 OPN1LWP04000 364 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms