RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 THY1P04216 161 aa11.68□□□□□ -0.54
NELFE-209ENST00000488426 TBXA2RP21731 343 aa11.68□□□□□ -0.54
NELFE-209ENST00000488426 MMP11P24347 488 aa11.68□□□□□ -0.54
NELFE-209ENST00000488426 ELK4P28324 431 aa11.68□□□□□ -0.54
NELFE-209ENST00000488426 IL12BP29460 328 aa11.68□□□□□ -0.54
NELFE-209ENST00000488426 NR0B1P51843 470 aaKnown RBP11.68□□□□□ -0.54
NELFE-209ENST00000488426 CRISP1P54107 249 aa11.68□□□□□ -0.54
NELFE-209ENST00000488426 UCNP55089 124 aa11.68□□□□□ -0.54
NELFE-209ENST00000488426 FOXL2P58012 376 aa11.68□□□□□ -0.54
NELFE-209ENST00000488426 ALDH6A1Q02252 535 aaKnown RBP11.68□□□□□ -0.54
NELFE-209ENST00000488426 CTU2Q2VPK5 515 aaKnown RBP11.68□□□□□ -0.54
NELFE-209ENST00000488426 TMEM164Q5U3C3 297 aa11.68□□□□□ -0.54
NELFE-209ENST00000488426 HSDL2Q6YN16 418 aa11.68□□□□□ -0.54
NELFE-209ENST00000488426 ZER1Q7Z7L7 766 aa11.68□□□□□ -0.54
NELFE-209ENST00000488426 DEPDC4Q8N2C3 294 aa11.68□□□□□ -0.54
NELFE-209ENST00000488426 APCDD1LQ8NCL9 501 aa11.68□□□□□ -0.54
NELFE-209ENST00000488426 OR8K3Q8NH51 312 aa11.68□□□□□ -0.54
NELFE-209ENST00000488426 NUBPLQ8TB37 319 aa11.68□□□□□ -0.54
NELFE-209ENST00000488426 PIGXQ8TBF5 258 aa11.68□□□□□ -0.54
NELFE-209ENST00000488426 GNPDA2Q8TDQ7 276 aa11.68□□□□□ -0.54
NELFE-209ENST00000488426 ZNF566Q969W8 418 aa11.68□□□□□ -0.54
NELFE-209ENST00000488426 DTNBP1Q96EV8 351 aa11.68□□□□□ -0.54
NELFE-209ENST00000488426 LMF1Q96S06 567 aa11.68□□□□□ -0.54
NELFE-209ENST00000488426 WDR77Q9BQA1 342 aaPredicted RBP11.68□□□□□ -0.54
NELFE-209ENST00000488426 DDA1Q9BW61 102 aa11.68□□□□□ -0.54
NELFE-209ENST00000488426 TRIM2Q9C040 744 aa11.68□□□□□ -0.54
NELFE-209ENST00000488426 TMEM27Q9HBJ8 222 aa11.68□□□□□ -0.54
NELFE-209ENST00000488426 KRCC1Q9NPI7 259 aaPredicted RBP11.68□□□□□ -0.54
NELFE-209ENST00000488426 REV1Q9UBZ9 1251 aa11.68□□□□□ -0.54
NELFE-209ENST00000488426 SLC7A7Q9UM01 511 aa11.68□□□□□ -0.54
NELFE-209ENST00000488426 NTNG1Q9Y2I2 539 aa11.68□□□□□ -0.54
NELFE-209ENST00000488426 PCDHGA6Q9Y5G7 932 aa11.68□□□□□ -0.54
NELFE-209ENST00000488426 TLN1Q9Y490 2541 aaKnown RBP11.67□□□□□ -0.54
NELFE-209ENST00000488426 TRIM64CA6NLI5 447 aa11.67□□□□□ -0.54
NELFE-209ENST00000488426 ZAR1LA6NP61 321 aa11.67□□□□□ -0.54
NELFE-209ENST00000488426 STMND1H3BQB6 276 aa11.67□□□□□ -0.54
NELFE-209ENST00000488426 SCDO00767 359 aa11.67□□□□□ -0.54
NELFE-209ENST00000488426 TSPAN2O60636 221 aa11.67□□□□□ -0.54
NELFE-209ENST00000488426 UTS2O95399 124 aa11.67□□□□□ -0.54
NELFE-209ENST00000488426 CSTAP01040 98 aa11.67□□□□□ -0.54
NELFE-209ENST00000488426 NGFRP08138 427 aa11.67□□□□□ -0.54
NELFE-209ENST00000488426 CCDC159P0C7I6 412 aa11.67□□□□□ -0.54
NELFE-209ENST00000488426 HPGDP15428 266 aa11.67□□□□□ -0.54
NELFE-209ENST00000488426 CHMP24386 653 aa11.67□□□□□ -0.54
NELFE-209ENST00000488426 RPL5P46777 297 aaKnown RBP11.67□□□□□ -0.54
NELFE-209ENST00000488426 HLCSP50747 726 aa11.67□□□□□ -0.54
NELFE-209ENST00000488426 PNLIPRP2P54317 469 aa11.67□□□□□ -0.54
NELFE-209ENST00000488426 GABARAPL2P60520 117 aa11.67□□□□□ -0.54
NELFE-209ENST00000488426 CXCR4P61073 352 aa11.67□□□□□ -0.54
NELFE-209ENST00000488426 RNF4P78317 190 aa11.67□□□□□ -0.54
NELFE-209ENST00000488426 PLCXD2Q0VAA5 305 aa11.67□□□□□ -0.54
NELFE-209ENST00000488426 CDK5R2Q13319 367 aa11.67□□□□□ -0.54
NELFE-209ENST00000488426 NCF4Q15080 339 aa11.67□□□□□ -0.54
NELFE-209ENST00000488426 MEP1AQ16819 746 aa11.67□□□□□ -0.54
NELFE-209ENST00000488426 LINC00303Q3SY05 128 aa11.67□□□□□ -0.54
NELFE-209ENST00000488426 FNDC7Q5VTL7 733 aa11.67□□□□□ -0.54
NELFE-209ENST00000488426 MBOAT2Q6ZWT7 520 aa11.67□□□□□ -0.54
NELFE-209ENST00000488426 RNF113BQ8IZP6 322 aaKnown RBP11.67□□□□□ -0.54
NELFE-209ENST00000488426 LSMEM1Q8N8F7 131 aa11.67□□□□□ -0.54
NELFE-209ENST00000488426 FAM71CQ8NEG0 241 aa11.67□□□□□ -0.54
NELFE-209ENST00000488426 EXTL1Q92935 676 aa11.67□□□□□ -0.54
NELFE-209ENST00000488426 TSC22D3Q99576 134 aa11.67□□□□□ -0.54
NELFE-209ENST00000488426 AKIRIN1Q9H9L7 192 aaPredicted RBP11.67□□□□□ -0.54
NELFE-209ENST00000488426 ZNF223Q9UK11 482 aaPredicted RBP11.67□□□□□ -0.54
NELFE-209ENST00000488426 LOC102723996A0A087X1L8 192 aa11.66□□□□□ -0.54
NELFE-209ENST00000488426 LOC101059948A0A1B0GTJ6 334 aa11.66□□□□□ -0.54
NELFE-209ENST00000488426 ABCB7O75027 752 aa11.66□□□□□ -0.54
NELFE-209ENST00000488426 REM1O75628 298 aa11.66□□□□□ -0.54
NELFE-209ENST00000488426 LYPD3O95274 346 aa11.66□□□□□ -0.54
NELFE-209ENST00000488426 LIFP15018 202 aa11.66□□□□□ -0.54
NELFE-209ENST00000488426 ATP6V1B1P15313 513 aa11.66□□□□□ -0.54
NELFE-209ENST00000488426 CRHBPP24387 322 aa11.66□□□□□ -0.54
NELFE-209ENST00000488426 ACAA2P42765 397 aaKnown RBP11.66□□□□□ -0.54
NELFE-209ENST00000488426 GSSP48637 474 aa11.66□□□□□ -0.54
NELFE-209ENST00000488426 RNF144AP50876 292 aaPredicted RBP11.66□□□□□ -0.54
NELFE-209ENST00000488426 NR1H2P55055 460 aa11.66□□□□□ -0.54
NELFE-209ENST00000488426 SLC26A5P58743 744 aa11.66□□□□□ -0.54
NELFE-209ENST00000488426 TEKQ02763 1124 aa11.66□□□□□ -0.54
NELFE-209ENST00000488426 TSPAN31Q12999 210 aa11.66□□□□□ -0.54
NELFE-209ENST00000488426 MAD2L1BPQ15013 274 aaPredicted RBP11.66□□□□□ -0.54
NELFE-209ENST00000488426 PTGES3Q15185 160 aaKnown RBP11.66□□□□□ -0.54
NELFE-209ENST00000488426 CCDC71Q8IV32 467 aaPredicted RBP11.66□□□□□ -0.54
NELFE-209ENST00000488426 NKAIN4Q8IVV8 208 aa11.66□□□□□ -0.54
NELFE-209ENST00000488426 ZNF843Q8N446 348 aa11.66□□□□□ -0.54
NELFE-209ENST00000488426 EXD3Q8N9H8 876 aa11.66□□□□□ -0.54
NELFE-209ENST00000488426 GALNT6Q8NCL4 622 aa11.66□□□□□ -0.54
NELFE-209ENST00000488426 OMA1Q96E52 524 aa11.66□□□□□ -0.54
NELFE-209ENST00000488426 ADOQ96SZ5 270 aa11.66□□□□□ -0.54
NELFE-209ENST00000488426 PRSS27Q9BQR3 290 aa11.66□□□□□ -0.54
NELFE-209ENST00000488426 ADNPQ9H2P0 1102 aa11.66□□□□□ -0.54
NELFE-209ENST00000488426 EXOSC3Q9NQT5 275 aaKnown RBP11.66□□□□□ -0.54
NELFE-209ENST00000488426 A0A1W2PQD3 144 aa11.66□□□□□ -0.54
NELFE-209ENST00000488426 ERVH48-1M5A8F1 160 aa11.66□□□□□ -0.54
NELFE-209ENST00000488426 SLC1A7O00341 560 aa11.66□□□□□ -0.54
NELFE-209ENST00000488426 CHP2O43745 196 aa11.66□□□□□ -0.54
NELFE-209ENST00000488426 PRKNO60260 465 aaPredicted RBP11.66□□□□□ -0.54
NELFE-209ENST00000488426 RAD1O60671 282 aa11.66□□□□□ -0.54
NELFE-209ENST00000488426 STK17BO94768 372 aa11.66□□□□□ -0.54
NELFE-209ENST00000488426 ANGPTL1O95841 491 aa11.66□□□□□ -0.54
NELFE-209ENST00000488426 TFAP2AP05549 437 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms